EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCJAG00000005936 (Gene tree)
Gene ID
100415454
Gene Symbol
SMARCA4
Alias
BAF190|BRG1|FLJ39786|SNF2|SNF2-BETA|SNF2L4|SNF2LB|SWI2|hSNF2b
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Callithrix_jacchus
Status
putative
Strand
Plus strand
Length
77870 bases
Position
chrNTIC01011113.1:8074083-8151952
Accession
11100
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCJAP00000011400ResIIIPF04851.151.5e-0911
ENSCJAP00000011434ResIIIPF04851.152.5e-0911
ENSCJAP00000011400BRKPF07533.161.6e-1711
ENSCJAP00000011434BRKPF07533.161.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCJAT00000012063SMARCA4-2015040-ENSCJAP000000114341679 (aa)-F7HNQ4
ENSCJAT00000012028SMARCA4-2024974-ENSCJAP000000114001657 (aa)-F7HUH7
Gene Model
Click here to download ENSCJAG00000005936's gene model file
Pathways
Pathway IDPathway NameSource
cjc04714ThermogenesisKEGG
cjc05225Hepatocellular carcinomaKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000005936's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCJAG00000005936SMARCA49872.617ENSCJAG00000010710SMARCA29278.184
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCJAG00000005936SMARCA410099.762ENSG00000127616SMARCA410099.762Homo_sapiens
ENSCJAG00000005936SMARCA48989.342ENSAPOG00000004542SMARCA49588.785Acanthochromis_polyacanthus
ENSCJAG00000005936SMARCA47189.944ENSAPOG00000003509smarca4a9489.944Acanthochromis_polyacanthus
ENSCJAG00000005936SMARCA410096.131ENSAMEG00000010868SMARCA410096.131Ailuropoda_melanoleuca
ENSCJAG00000005936SMARCA49580.824ENSACIG00000003035-7689.822Amphilophus_citrinellus
ENSCJAG00000005936SMARCA49783.714ENSACIG00000021550smarca4a9883.215Amphilophus_citrinellus
ENSCJAG00000005936SMARCA49081.602ENSAOCG00000019167smarca4a10081.494Amphiprion_ocellaris
ENSCJAG00000005936SMARCA48890.302ENSAOCG00000009450-9489.914Amphiprion_ocellaris
ENSCJAG00000005936SMARCA49586.940ENSAPEG00000023108-9786.135Amphiprion_percula
ENSCJAG00000005936SMARCA49081.668ENSAPEG00000015559smarca4a10081.560Amphiprion_percula
ENSCJAG00000005936SMARCA49488.004ENSATEG00000001094-9585.433Anabas_testudineus
ENSCJAG00000005936SMARCA410083.353ENSATEG00000011524smarca4a10083.363Anabas_testudineus
ENSCJAG00000005936SMARCA410099.881ENSANAG00000036991SMARCA410099.881Aotus_nancymaae
ENSCJAG00000005936SMARCA49581.477ENSACLG00000008638-9588.577Astatotilapia_calliptera
ENSCJAG00000005936SMARCA49784.714ENSACLG00000000163smarca4a9587.573Astatotilapia_calliptera
ENSCJAG00000005936SMARCA49879.002ENSAMXG00000021023smarca4a9887.054Astyanax_mexicanus
ENSCJAG00000005936SMARCA48891.793ENSAMXG00000011238-9690.570Astyanax_mexicanus
ENSCJAG00000005936SMARCA410095.057ENSBTAG00000019220SMARCA410095.057Bos_taurus
ENSCJAG00000005936SMARCA410095.890ENSCAFG00000017584SMARCA410095.890Canis_familiaris
ENSCJAG00000005936SMARCA410096.724ENSCAFG00020024620SMARCA410096.724Canis_lupus_dingo
ENSCJAG00000005936SMARCA410091.141ENSCHIG00000015318SMARCA410091.141Capra_hircus
ENSCJAG00000005936SMARCA410097.623ENSTSYG00000012966SMARCA410097.623Carlito_syrichta
ENSCJAG00000005936SMARCA410084.125ENSCAPG00000015932SMARCA49597.628Cavia_aperea
ENSCJAG00000005936SMARCA410095.655ENSCPOG00000015549SMARCA410095.655Cavia_porcellus
ENSCJAG00000005936SMARCA410094.500ENSCCAG00000031660SMARCA410094.500Cebus_capucinus
ENSCJAG00000005936SMARCA410099.762ENSCATG00000029530SMARCA410099.762Cercocebus_atys
ENSCJAG00000005936SMARCA410094.818ENSCLAG00000011946SMARCA410094.818Chinchilla_lanigera
ENSCJAG00000005936SMARCA410093.508ENSCPBG00000009994SMARCA410093.508Chrysemys_picta_bellii
ENSCJAG00000005936SMARCA410099.762ENSCANG00000036013SMARCA410099.762Colobus_angolensis_palliatus
ENSCJAG00000005936SMARCA49996.897ENSCGRG00001016732Smarca49996.897Cricetulus_griseus_chok1gshd
ENSCJAG00000005936SMARCA49996.897ENSCGRG00000017242Smarca49996.897Cricetulus_griseus_crigri
ENSCJAG00000005936SMARCA49783.070ENSCSEG00000014771smarca4a10083.177Cynoglossus_semilaevis
ENSCJAG00000005936SMARCA49289.627ENSCVAG00000006979smarca4a9982.769Cyprinodon_variegatus
ENSCJAG00000005936SMARCA49980.566ENSCVAG00000003018-9881.288Cyprinodon_variegatus
ENSCJAG00000005936SMARCA49280.216ENSDARG00000104339SMARCA49581.124Danio_rerio
ENSCJAG00000005936SMARCA410083.382ENSDARG00000077226smarca4a10083.909Danio_rerio
ENSCJAG00000005936SMARCA410091.314ENSDNOG00000048847SMARCA410091.314Dasypus_novemcinctus
ENSCJAG00000005936SMARCA48393.813ENSDORG00000002544Smarca48993.813Dipodomys_ordii
ENSCJAG00000005936SMARCA49487.389ENSETEG00000013361SMARCA49487.389Echinops_telfairi
ENSCJAG00000005936SMARCA410096.314ENSEASG00005006167SMARCA410096.314Equus_asinus_asinus
ENSCJAG00000005936SMARCA410095.593ENSECAG00000008334SMARCA410095.593Equus_caballus
ENSCJAG00000005936SMARCA49483.661ENSELUG00000023232-9088.755Esox_lucius
ENSCJAG00000005936SMARCA410083.998ENSELUG00000010247smarca4a9786.377Esox_lucius
ENSCJAG00000005936SMARCA410097.737ENSFCAG00000004894SMARCA410097.737Felis_catus
ENSCJAG00000005936SMARCA410084.305ENSFALG00000004208SMARCA410084.305Ficedula_albicollis
ENSCJAG00000005936SMARCA49294.815ENSFDAG00000012237SMARCA49794.815Fukomys_damarensis
ENSCJAG00000005936SMARCA49782.588ENSFHEG00000010182smarca4a10082.982Fundulus_heteroclitus
ENSCJAG00000005936SMARCA49587.094ENSFHEG00000007902-9786.667Fundulus_heteroclitus
ENSCJAG00000005936SMARCA49379.446ENSGMOG00000005756-8778.763Gadus_morhua
ENSCJAG00000005936SMARCA49376.923ENSGMOG00000002649smarca4a8781.882Gadus_morhua
ENSCJAG00000005936SMARCA47096.870ENSGALG00000047145SMARCA410096.870Gallus_gallus
ENSCJAG00000005936SMARCA49084.565ENSGAFG00000014900smarca4a9984.135Gambusia_affinis
ENSCJAG00000005936SMARCA49484.661ENSGAFG00000008827-9583.839Gambusia_affinis
ENSCJAG00000005936SMARCA49980.012ENSGACG00000016033-9978.310Gasterosteus_aculeatus
ENSCJAG00000005936SMARCA49882.036ENSGACG00000006691smarca4a10081.627Gasterosteus_aculeatus
ENSCJAG00000005936SMARCA410093.448ENSGAGG00000016757SMARCA410093.448Gopherus_agassizii
ENSCJAG00000005936SMARCA410099.702ENSGGOG00000009882SMARCA410099.702Gorilla_gorilla
ENSCJAG00000005936SMARCA410084.368ENSHBUG00000021172smarca4a10083.665Haplochromis_burtoni
ENSCJAG00000005936SMARCA410080.403ENSHBUG00000005447-9786.660Haplochromis_burtoni
ENSCJAG00000005936SMARCA410097.260ENSHGLG00000010519SMARCA410097.260Heterocephalus_glaber_female
ENSCJAG00000005936SMARCA410094.646ENSHGLG00100013774SMARCA410094.646Heterocephalus_glaber_male
ENSCJAG00000005936SMARCA49582.585ENSHCOG00000009510smarca4a9682.729Hippocampus_comes
ENSCJAG00000005936SMARCA410084.016ENSIPUG00000006107smarca4a10084.426Ictalurus_punctatus
ENSCJAG00000005936SMARCA49387.645ENSIPUG00000016346-9586.936Ictalurus_punctatus
ENSCJAG00000005936SMARCA49997.317ENSSTOG00000007939SMARCA49997.317Ictidomys_tridecemlineatus
ENSCJAG00000005936SMARCA410097.379ENSJJAG00000012877Smarca410097.379Jaculus_jaculus
ENSCJAG00000005936SMARCA410082.363ENSKMAG00000011931smarca4a10082.540Kryptolebias_marmoratus
ENSCJAG00000005936SMARCA49587.285ENSKMAG00000019518-9590.231Kryptolebias_marmoratus
ENSCJAG00000005936SMARCA49581.931ENSLBEG00000017383smarca4a7783.699Labrus_bergylta
ENSCJAG00000005936SMARCA49082.362ENSLBEG00000020655-8173.236Labrus_bergylta
ENSCJAG00000005936SMARCA45088.902ENSLACG00000015309SMARCA410088.425Latimeria_chalumnae
ENSCJAG00000005936SMARCA410084.086ENSLOCG00000007820smarca4a7891.363Lepisosteus_oculatus
ENSCJAG00000005936SMARCA410095.890ENSLAFG00000001433SMARCA410095.890Loxodonta_africana
ENSCJAG00000005936SMARCA410099.762ENSMFAG00000032146SMARCA410099.762Macaca_fascicularis
ENSCJAG00000005936SMARCA49999.286ENSMMUG00000012042SMARCA49999.286Macaca_mulatta
ENSCJAG00000005936SMARCA410099.464ENSMNEG00000028512SMARCA410099.464Macaca_nemestrina
ENSCJAG00000005936SMARCA410099.702ENSMLEG00000034976SMARCA410099.702Mandrillus_leucophaeus
ENSCJAG00000005936SMARCA410083.489ENSMAMG00000009256smarca4a10083.255Mastacembelus_armatus
ENSCJAG00000005936SMARCA49487.062ENSMAMG00000002841-9590.021Mastacembelus_armatus
ENSCJAG00000005936SMARCA410083.792ENSMZEG00005003889smarca4a10083.324Maylandia_zebra
ENSCJAG00000005936SMARCA49385.020ENSMZEG00005023861-9589.811Maylandia_zebra
ENSCJAG00000005936SMARCA49996.778ENSMAUG00000020731Smarca49996.778Mesocricetus_auratus
ENSCJAG00000005936SMARCA410098.749ENSMICG00000009806SMARCA410098.749Microcebus_murinus
ENSCJAG00000005936SMARCA49997.010ENSMOCG00000022209Smarca49997.010Microtus_ochrogaster
ENSCJAG00000005936SMARCA49581.538ENSMMOG00000007571smarca4a9881.377Mola_mola
ENSCJAG00000005936SMARCA49978.224ENSMMOG00000008466-9883.151Mola_mola
ENSCJAG00000005936SMARCA410096.665ENSMODG00000006287SMARCA410096.665Monodelphis_domestica
ENSCJAG00000005936SMARCA49288.810ENSMALG00000003388smarca4a10083.226Monopterus_albus
ENSCJAG00000005936SMARCA48489.603ENSMALG00000021534-9691.429Monopterus_albus
ENSCJAG00000005936SMARCA410095.295MGP_CAROLIEiJ_G0031879Smarca410097.143Mus_caroli
ENSCJAG00000005936SMARCA410095.354ENSMUSG00000032187Smarca49997.143Mus_musculus
ENSCJAG00000005936SMARCA410094.818MGP_PahariEiJ_G0014745Smarca410096.525Mus_pahari
ENSCJAG00000005936SMARCA410095.295MGP_SPRETEiJ_G0033003Smarca410097.143Mus_spretus
ENSCJAG00000005936SMARCA410095.771ENSMPUG00000005711SMARCA410095.771Mustela_putorius_furo
ENSCJAG00000005936SMARCA410095.652ENSMLUG00000004491-10095.652Myotis_lucifugus
ENSCJAG00000005936SMARCA410096.665ENSNGAG00000021852Smarca410096.665Nannospalax_galili
ENSCJAG00000005936SMARCA49078.293ENSNBRG00000018865-7789.651Neolamprologus_brichardi
ENSCJAG00000005936SMARCA48989.619ENSNBRG00000011457smarca4a9389.146Neolamprologus_brichardi
ENSCJAG00000005936SMARCA410093.810ENSNLEG00000012389SMARCA410093.810Nomascus_leucogenys
ENSCJAG00000005936SMARCA47993.103ENSOPRG00000000885-7893.281Ochotona_princeps
ENSCJAG00000005936SMARCA410093.095ENSODEG00000017127SMARCA410093.095Octodon_degus
ENSCJAG00000005936SMARCA410080.461ENSONIG00000018040-9786.756Oreochromis_niloticus
ENSCJAG00000005936SMARCA410084.401ENSONIG00000008196smarca4a10084.242Oreochromis_niloticus
ENSCJAG00000005936SMARCA49987.732ENSOCUG00000001787SMARCA49987.732Oryctolagus_cuniculus
ENSCJAG00000005936SMARCA49782.382ENSORLG00000015452smarca4a9787.224Oryzias_latipes
ENSCJAG00000005936SMARCA49579.722ENSORLG00000003955-9786.660Oryzias_latipes
ENSCJAG00000005936SMARCA49579.735ENSORLG00020009728-9786.660Oryzias_latipes_hni
ENSCJAG00000005936SMARCA49781.896ENSORLG00020004611smarca4a9787.224Oryzias_latipes_hni
ENSCJAG00000005936SMARCA49782.017ENSORLG00015016560smarca4a9787.416Oryzias_latipes_hsok
ENSCJAG00000005936SMARCA49979.569ENSORLG00015007739-9786.372Oryzias_latipes_hsok
ENSCJAG00000005936SMARCA410082.785ENSOMEG00000007486smarca4a10083.040Oryzias_melastigma
ENSCJAG00000005936SMARCA49679.797ENSOMEG00000016626-9786.660Oryzias_melastigma
ENSCJAG00000005936SMARCA49094.511ENSOGAG00000016148SMARCA410094.511Otolemur_garnettii
ENSCJAG00000005936SMARCA410094.107ENSOARG00000017454SMARCA410094.107Ovis_aries
ENSCJAG00000005936SMARCA410099.762ENSPPAG00000043191SMARCA410099.762Pan_paniscus
ENSCJAG00000005936SMARCA410097.737ENSPPRG00000000064SMARCA410097.737Panthera_pardus
ENSCJAG00000005936SMARCA410087.859ENSPTIG00000017447SMARCA410087.859Panthera_tigris_altaica
ENSCJAG00000005936SMARCA410099.762ENSPTRG00000010488SMARCA410099.762Pan_troglodytes
ENSCJAG00000005936SMARCA410099.643ENSPANG00000011042SMARCA410099.643Papio_anubis
ENSCJAG00000005936SMARCA49882.541ENSPKIG00000010087-9883.665Paramormyrops_kingsleyae
ENSCJAG00000005936SMARCA410084.269ENSPKIG00000007770SMARCA410084.737Paramormyrops_kingsleyae
ENSCJAG00000005936SMARCA410089.352ENSPSIG00000005547SMARCA410089.233Pelodiscus_sinensis
ENSCJAG00000005936SMARCA49997.129ENSPEMG00000020389Smarca49997.129Peromyscus_maniculatus_bairdii
ENSCJAG00000005936SMARCA410094.937ENSPCIG00000017138SMARCA410094.937Phascolarctos_cinereus
ENSCJAG00000005936SMARCA410083.462ENSPFOG00000007892smarca4a10083.561Poecilia_formosa
ENSCJAG00000005936SMARCA49586.998ENSPFOG00000012930-9786.571Poecilia_formosa
ENSCJAG00000005936SMARCA47890.545ENSPLAG00000018616-9587.561Poecilia_latipinna
ENSCJAG00000005936SMARCA49488.409ENSPLAG00000014294smarca4a10082.914Poecilia_latipinna
ENSCJAG00000005936SMARCA49581.824ENSPMEG00000003725smarca4a9783.405Poecilia_mexicana
ENSCJAG00000005936SMARCA49487.709ENSPMEG00000008929-9390.231Poecilia_mexicana
ENSCJAG00000005936SMARCA49387.463ENSPREG00000014608smarca4a10082.576Poecilia_reticulata
ENSCJAG00000005936SMARCA48991.870ENSPREG00000014823-9389.688Poecilia_reticulata
ENSCJAG00000005936SMARCA410097.915ENSPPYG00000009568SMARCA410097.915Pongo_abelii
ENSCJAG00000005936SMARCA47698.675ENSPCAG00000014054SMARCA47798.675Procavia_capensis
ENSCJAG00000005936SMARCA410097.022ENSPCOG00000023011SMARCA410097.022Propithecus_coquereli
ENSCJAG00000005936SMARCA49699.058ENSPVAG00000007787SMARCA49699.058Pteropus_vampyrus
ENSCJAG00000005936SMARCA49578.701ENSPNYG00000023995-7789.717Pundamilia_nyererei
ENSCJAG00000005936SMARCA49288.520ENSPNYG00000000717smarca4a9390.461Pundamilia_nyererei
ENSCJAG00000005936SMARCA49385.736ENSPNAG00000024136smarca4a9885.829Pygocentrus_nattereri
ENSCJAG00000005936SMARCA48991.208ENSPNAG00000006636-9490.536Pygocentrus_nattereri
ENSCJAG00000005936SMARCA410095.235ENSRNOG00000009271Smarca410095.235Rattus_norvegicus
ENSCJAG00000005936SMARCA410099.583ENSRBIG00000038696SMARCA410099.583Rhinopithecus_bieti
ENSCJAG00000005936SMARCA410099.643ENSRROG00000045509SMARCA410099.643Rhinopithecus_roxellana
ENSCJAG00000005936SMARCA49999.940ENSSBOG00000026896SMARCA410099.940Saimiri_boliviensis_boliviensis
ENSCJAG00000005936SMARCA410095.544ENSSHAG00000001642SMARCA410095.544Sarcophilus_harrisii
ENSCJAG00000005936SMARCA410084.687ENSSFOG00015013823smarca49789.635Scleropages_formosus
ENSCJAG00000005936SMARCA49185.531ENSSFOG00015009921-9186.512Scleropages_formosus
ENSCJAG00000005936SMARCA410079.723ENSSMAG00000014082-9783.856Scophthalmus_maximus
ENSCJAG00000005936SMARCA410083.304ENSSMAG00000003200smarca4a10082.484Scophthalmus_maximus
ENSCJAG00000005936SMARCA410079.976ENSSDUG00000017298smarca4a10079.953Seriola_dumerili
ENSCJAG00000005936SMARCA49488.201ENSSDUG00000005388-9588.785Seriola_dumerili
ENSCJAG00000005936SMARCA410084.152ENSSLDG00000024486smarca4a10083.607Seriola_lalandi_dorsalis
ENSCJAG00000005936SMARCA48990.486ENSSLDG00000023663-9490.021Seriola_lalandi_dorsalis
ENSCJAG00000005936SMARCA463100.000ENSSARG00000013477SMARCA485100.000Sorex_araneus
ENSCJAG00000005936SMARCA49589.787ENSSPUG00000004558SMARCA49889.800Sphenodon_punctatus
ENSCJAG00000005936SMARCA49586.749ENSSPAG00000012533-9786.135Stegastes_partitus
ENSCJAG00000005936SMARCA410083.724ENSSPAG00000004248smarca4a10082.710Stegastes_partitus
ENSCJAG00000005936SMARCA410095.950ENSSSCG00000013629SMARCA410095.950Sus_scrofa
ENSCJAG00000005936SMARCA45189.591ENSTGUG00000015488-10089.591Taeniopygia_guttata
ENSCJAG00000005936SMARCA48987.407ENSTRUG00000001378SMARCA49587.185Takifugu_rubripes
ENSCJAG00000005936SMARCA49077.546ENSTRUG00000004885smarca4a10077.104Takifugu_rubripes
ENSCJAG00000005936SMARCA410079.553ENSTNIG00000004536SMARCA410080.388Tetraodon_nigroviridis
ENSCJAG00000005936SMARCA47384.859ENSTNIG00000004859-10083.889Tetraodon_nigroviridis
ENSCJAG00000005936SMARCA410096.010ENSTTRG00000009519SMARCA410096.010Tursiops_truncatus
ENSCJAG00000005936SMARCA410095.831ENSUAMG00000014661SMARCA410095.831Ursus_americanus
ENSCJAG00000005936SMARCA410095.950ENSUMAG00000022005SMARCA49997.071Ursus_maritimus
ENSCJAG00000005936SMARCA410095.890ENSVVUG00000017820SMARCA49795.890Vulpes_vulpes
ENSCJAG00000005936SMARCA410084.991ENSXETG00000009355smarca49987.195Xenopus_tropicalis
ENSCJAG00000005936SMARCA49487.673ENSXCOG00000013494-9785.892Xiphophorus_couchianus
ENSCJAG00000005936SMARCA410082.854ENSXMAG00000006321smarca4a10082.874Xiphophorus_maculatus
ENSCJAG00000005936SMARCA49587.861ENSXMAG00000007030-9787.428Xiphophorus_maculatus

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