EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000006035 (Gene tree)
Gene ID: 100415491
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 140087 bases
Position: chrNTIC01036611.1:90300759-90440845
Accession: 100415491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000011250	PUF	PF00806.19	3.2e-71	1	8
ENSCJAP00000011250	PUF	PF00806.19	3.2e-71	2	8
ENSCJAP00000011250	PUF	PF00806.19	3.2e-71	3	8
ENSCJAP00000011250	PUF	PF00806.19	3.2e-71	4	8
ENSCJAP00000011250	PUF	PF00806.19	3.2e-71	5	8
ENSCJAP00000011250	PUF	PF00806.19	3.2e-71	6	8
ENSCJAP00000011250	PUF	PF00806.19	3.2e-71	7	8
ENSCJAP00000011250	PUF	PF00806.19	3.2e-71	8	8
ENSCJAP00000011275	PUF	PF00806.19	1.3e-70	1	8
ENSCJAP00000011275	PUF	PF00806.19	1.3e-70	2	8
ENSCJAP00000011275	PUF	PF00806.19	1.3e-70	3	8
ENSCJAP00000011275	PUF	PF00806.19	1.3e-70	4	8
ENSCJAP00000011275	PUF	PF00806.19	1.3e-70	5	8
ENSCJAP00000011275	PUF	PF00806.19	1.3e-70	6	8
ENSCJAP00000011275	PUF	PF00806.19	1.3e-70	7	8
ENSCJAP00000011275	PUF	PF00806.19	1.3e-70	8	8
ENSCJAP00000011345	PUF	PF00806.19	1.6e-70	1	8
ENSCJAP00000011345	PUF	PF00806.19	1.6e-70	2	8
ENSCJAP00000011345	PUF	PF00806.19	1.6e-70	3	8
ENSCJAP00000011345	PUF	PF00806.19	1.6e-70	4	8
ENSCJAP00000011345	PUF	PF00806.19	1.6e-70	5	8
ENSCJAP00000011345	PUF	PF00806.19	1.6e-70	6	8
ENSCJAP00000011345	PUF	PF00806.19	1.6e-70	7	8
ENSCJAP00000011345	PUF	PF00806.19	1.6e-70	8	8
ENSCJAP00000011316	PUF	PF00806.19	6e-70	1	8
ENSCJAP00000011316	PUF	PF00806.19	6e-70	2	8
ENSCJAP00000011316	PUF	PF00806.19	6e-70	3	8
ENSCJAP00000011316	PUF	PF00806.19	6e-70	4	8
ENSCJAP00000011316	PUF	PF00806.19	6e-70	5	8
ENSCJAP00000011316	PUF	PF00806.19	6e-70	6	8
ENSCJAP00000011316	PUF	PF00806.19	6e-70	7	8
ENSCJAP00000011316	PUF	PF00806.19	6e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000011970	PUM1-202	3390	-	ENSCJAP00000011345	1129 (aa)	-	F7I8V4
ENSCJAT00000011871	PUM1-204	2835	-	ENSCJAP00000011250	944 (aa)	-	F7IQA9
ENSCJAT00000011925	PUM1-205	1539	-	ENSCJAP00000011301	512 (aa)	-	F7IDG7
ENSCJAT00000011940	PUM1-201	5644	XM_009000781	ENSCJAP00000011316	1189 (aa)	XP_008999029	F7IDF3
ENSCJAT00000011899	PUM1-203	3327	-	ENSCJAP00000011275	1108 (aa)	-	F7IMX7

Gene Model

Click here to download ENSCJAG00000006035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000006035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000006035	PUM1	86	87.354	ENSCJAG00000007450	PUM2	100	88.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000006035	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSCJAG00000006035	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSCJAG00000006035	PUM1	100	100.000	ENSAMEG00000017656	PUM1	97	99.328	Ailuropoda_melanoleuca
ENSCJAG00000006035	PUM1	100	81.312	ENSACIG00000021013	pum1	100	76.675	Amphilophus_citrinellus
ENSCJAG00000006035	PUM1	90	91.566	ENSAOCG00000003944	pum1	100	91.084	Amphiprion_ocellaris
ENSCJAG00000006035	PUM1	90	91.566	ENSAPEG00000014550	pum1	100	91.084	Amphiprion_percula
ENSCJAG00000006035	PUM1	100	81.312	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSCJAG00000006035	PUM1	100	98.309	ENSAPLG00000009351	PUM1	100	97.561	Anas_platyrhynchos
ENSCJAG00000006035	PUM1	100	98.309	ENSACAG00000000682	PUM1	98	95.711	Anolis_carolinensis
ENSCJAG00000006035	PUM1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSCJAG00000006035	PUM1	90	76.759	ENSACLG00000019354	pum1	100	79.113	Astatotilapia_calliptera
ENSCJAG00000006035	PUM1	100	92.754	ENSAMXG00000020607	pum1	92	92.754	Astyanax_mexicanus
ENSCJAG00000006035	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSCJAG00000006035	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	97.140	Canis_familiaris
ENSCJAG00000006035	PUM1	92	97.436	ENSCAFG00020024616	PUM1	99	98.672	Canis_lupus_dingo
ENSCJAG00000006035	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.368	Capra_hircus
ENSCJAG00000006035	PUM1	100	99.517	ENSTSYG00000008868	PUM1	100	99.470	Carlito_syrichta
ENSCJAG00000006035	PUM1	100	99.306	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSCJAG00000006035	PUM1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSCJAG00000006035	PUM1	100	99.306	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSCJAG00000006035	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	98.833	Chlorocebus_sabaeus
ENSCJAG00000006035	PUM1	99	95.977	ENSCHOG00000010245	PUM1	93	95.977	Choloepus_hoffmanni
ENSCJAG00000006035	PUM1	100	98.068	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSCJAG00000006035	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSCJAG00000006035	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSCJAG00000006035	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSCJAG00000006035	PUM1	90	76.204	ENSCSEG00000015981	pum1	100	77.891	Cynoglossus_semilaevis
ENSCJAG00000006035	PUM1	100	80.817	ENSCVAG00000007043	pum1	100	75.888	Cyprinodon_variegatus
ENSCJAG00000006035	PUM1	100	92.995	ENSDARG00000099256	pum1	95	93.750	Danio_rerio
ENSCJAG00000006035	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	98.991	Dasypus_novemcinctus
ENSCJAG00000006035	PUM1	89	98.381	ENSDORG00000001875	Pum1	100	99.034	Dipodomys_ordii
ENSCJAG00000006035	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.561	Echinops_telfairi
ENSCJAG00000006035	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	99.243	Equus_asinus_asinus
ENSCJAG00000006035	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	99.243	Equus_caballus
ENSCJAG00000006035	PUM1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSCJAG00000006035	PUM1	100	83.599	ENSELUG00000002409	pum1	95	93.237	Esox_lucius
ENSCJAG00000006035	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSCJAG00000006035	PUM1	100	98.309	ENSFALG00000001214	PUM1	97	96.231	Ficedula_albicollis
ENSCJAG00000006035	PUM1	100	99.306	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSCJAG00000006035	PUM1	91	91.084	ENSGMOG00000010491	pum1	94	90.602	Gadus_morhua
ENSCJAG00000006035	PUM1	100	98.309	ENSGALG00000042598	PUM1	99	98.785	Gallus_gallus
ENSCJAG00000006035	PUM1	100	80.941	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSCJAG00000006035	PUM1	100	81.034	ENSGACG00000005717	pum1	100	76.689	Gasterosteus_aculeatus
ENSCJAG00000006035	PUM1	100	98.068	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSCJAG00000006035	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSCJAG00000006035	PUM1	100	81.064	ENSHBUG00000018718	pum1	100	76.466	Haplochromis_burtoni
ENSCJAG00000006035	PUM1	100	98.907	ENSHGLG00000013819	Pum1	100	98.907	Heterocephalus_glaber_female
ENSCJAG00000006035	PUM1	100	98.907	ENSHGLG00100008621	Pum1	100	98.907	Heterocephalus_glaber_male
ENSCJAG00000006035	PUM1	100	92.029	ENSIPUG00000020421	pum1	93	92.029	Ictalurus_punctatus
ENSCJAG00000006035	PUM1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSCJAG00000006035	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSCJAG00000006035	PUM1	100	80.446	ENSKMAG00000003481	pum1	100	76.053	Kryptolebias_marmoratus
ENSCJAG00000006035	PUM1	100	91.566	ENSLBEG00000002527	pum1	94	91.084	Labrus_bergylta
ENSCJAG00000006035	PUM1	100	88.848	ENSLACG00000017188	PUM1	99	86.761	Latimeria_chalumnae
ENSCJAG00000006035	PUM1	100	96.377	ENSLOCG00000005210	pum1	95	96.377	Lepisosteus_oculatus
ENSCJAG00000006035	PUM1	100	98.738	ENSLAFG00000003178	PUM1	100	98.738	Loxodonta_africana
ENSCJAG00000006035	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSCJAG00000006035	PUM1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSCJAG00000006035	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSCJAG00000006035	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSCJAG00000006035	PUM1	100	81.064	ENSMAMG00000011606	pum1	94	90.843	Mastacembelus_armatus
ENSCJAG00000006035	PUM1	100	81.064	ENSMZEG00005005834	pum1	100	76.466	Maylandia_zebra
ENSCJAG00000006035	PUM1	100	98.309	ENSMGAG00000000724	PUM1	100	97.477	Meleagris_gallopavo
ENSCJAG00000006035	PUM1	100	99.306	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSCJAG00000006035	PUM1	100	99.579	ENSMICG00000007713	-	100	99.579	Microcebus_murinus
ENSCJAG00000006035	PUM1	100	96.931	ENSMICG00000012213	-	100	96.931	Microcebus_murinus
ENSCJAG00000006035	PUM1	100	98.907	ENSMOCG00000015463	Pum1	100	98.907	Microtus_ochrogaster
ENSCJAG00000006035	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	91.283	Mola_mola
ENSCJAG00000006035	PUM1	100	97.585	ENSMODG00000017067	PUM1	100	97.565	Monodelphis_domestica
ENSCJAG00000006035	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSCJAG00000006035	PUM1	100	99.272	MGP_CAROLIEiJ_G0026549	Pum1	100	98.654	Mus_caroli
ENSCJAG00000006035	PUM1	100	99.515	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSCJAG00000006035	PUM1	100	99.515	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSCJAG00000006035	PUM1	100	99.515	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSCJAG00000006035	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	99.159	Mustela_putorius_furo
ENSCJAG00000006035	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	98.991	Myotis_lucifugus
ENSCJAG00000006035	PUM1	100	99.364	ENSNGAG00000002378	Pum1	100	99.364	Nannospalax_galili
ENSCJAG00000006035	PUM1	100	78.452	ENSNBRG00000010689	pum1	100	83.684	Neolamprologus_brichardi
ENSCJAG00000006035	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSCJAG00000006035	PUM1	84	96.959	ENSMEUG00000000976	-	82	96.959	Notamacropus_eugenii
ENSCJAG00000006035	PUM1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSCJAG00000006035	PUM1	100	99.034	ENSODEG00000003465	PUM1	100	98.907	Octodon_degus
ENSCJAG00000006035	PUM1	100	81.618	ENSONIG00000002290	pum1	100	76.796	Oreochromis_niloticus
ENSCJAG00000006035	PUM1	80	83.462	ENSOANG00000004902	-	100	77.971	Ornithorhynchus_anatinus
ENSCJAG00000006035	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	98.991	Oryctolagus_cuniculus
ENSCJAG00000006035	PUM1	100	81.931	ENSORLG00000011482	pum1	94	90.602	Oryzias_latipes
ENSCJAG00000006035	PUM1	100	82.054	ENSORLG00020019461	pum1	100	76.132	Oryzias_latipes_hni
ENSCJAG00000006035	PUM1	100	82.054	ENSORLG00015011375	pum1	100	76.214	Oryzias_latipes_hsok
ENSCJAG00000006035	PUM1	90	92.771	ENSOMEG00000009312	pum1	100	76.946	Oryzias_melastigma
ENSCJAG00000006035	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	96.725	Otolemur_garnettii
ENSCJAG00000006035	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	99.458	Ovis_aries
ENSCJAG00000006035	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSCJAG00000006035	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSCJAG00000006035	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSCJAG00000006035	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSCJAG00000006035	PUM1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSCJAG00000006035	PUM1	95	93.478	ENSPKIG00000010578	pum1	93	93.478	Paramormyrops_kingsleyae
ENSCJAG00000006035	PUM1	100	98.068	ENSPSIG00000014118	PUM1	100	97.752	Pelodiscus_sinensis
ENSCJAG00000006035	PUM1	100	76.819	ENSPMGG00000005836	pum1	100	82.130	Periophthalmus_magnuspinnatus
ENSCJAG00000006035	PUM1	100	99.306	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSCJAG00000006035	PUM1	100	97.649	ENSPCIG00000014151	PUM1	100	98.068	Phascolarctos_cinereus
ENSCJAG00000006035	PUM1	94	90.843	ENSPFOG00000007289	pum1	93	90.361	Poecilia_formosa
ENSCJAG00000006035	PUM1	100	90.843	ENSPLAG00000007256	pum1	94	90.361	Poecilia_latipinna
ENSCJAG00000006035	PUM1	85	83.086	ENSPMEG00000019543	pum1	99	78.493	Poecilia_mexicana
ENSCJAG00000006035	PUM1	100	80.941	ENSPREG00000005195	pum1	100	81.189	Poecilia_reticulata
ENSCJAG00000006035	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	97.692	Pongo_abelii
ENSCJAG00000006035	PUM1	85	98.765	ENSPCAG00000001979	PUM1	76	98.765	Procavia_capensis
ENSCJAG00000006035	PUM1	100	99.579	ENSPCOG00000004398	PUM1	100	99.579	Propithecus_coquereli
ENSCJAG00000006035	PUM1	100	100.000	ENSPVAG00000005207	PUM1	97	97.140	Pteropus_vampyrus
ENSCJAG00000006035	PUM1	100	81.064	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSCJAG00000006035	PUM1	100	92.995	ENSPNAG00000026728	pum1	95	92.995	Pygocentrus_nattereri
ENSCJAG00000006035	PUM1	100	99.515	ENSRNOG00000011709	Pum1	100	98.654	Rattus_norvegicus
ENSCJAG00000006035	PUM1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSCJAG00000006035	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000006035	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000006035	PUM1	100	97.585	ENSSHAG00000010918	PUM1	100	97.481	Sarcophilus_harrisii
ENSCJAG00000006035	PUM1	100	91.566	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSCJAG00000006035	PUM1	100	81.188	ENSSDUG00000009021	pum1	94	91.084	Seriola_dumerili
ENSCJAG00000006035	PUM1	100	81.188	ENSSLDG00000009667	pum1	93	91.084	Seriola_lalandi_dorsalis
ENSCJAG00000006035	PUM1	99	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSCJAG00000006035	PUM1	100	98.309	ENSSPUG00000006267	PUM1	100	96.972	Sphenodon_punctatus
ENSCJAG00000006035	PUM1	90	91.566	ENSSPAG00000016636	pum1	100	79.479	Stegastes_partitus
ENSCJAG00000006035	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSCJAG00000006035	PUM1	100	91.566	ENSTRUG00000013121	pum1	94	91.084	Takifugu_rubripes
ENSCJAG00000006035	PUM1	100	91.346	ENSTNIG00000016983	pum1	93	90.865	Tetraodon_nigroviridis
ENSCJAG00000006035	PUM1	93	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSCJAG00000006035	PUM1	92	99.271	ENSTTRG00000007436	PUM1	90	99.271	Tursiops_truncatus
ENSCJAG00000006035	PUM1	99	99.026	ENSUAMG00000018262	-	100	98.894	Ursus_americanus
ENSCJAG00000006035	PUM1	100	99.099	ENSUMAG00000009211	PUM1	100	99.758	Ursus_maritimus
ENSCJAG00000006035	PUM1	100	99.306	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSCJAG00000006035	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.758	Vulpes_vulpes
ENSCJAG00000006035	PUM1	100	88.889	ENSXETG00000012904	pum1	99	86.650	Xenopus_tropicalis
ENSCJAG00000006035	PUM1	100	80.941	ENSXMAG00000002945	pum1	100	78.157	Xiphophorus_maculatus