EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000006048 (Gene tree)
Gene ID: 100408600
Gene Symbol: GPATCH4
Alias: DKFZP434F1735|FLJ20249|GPATC4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 6465 bases
Position: chrNTIC01013335.1:36212633-36219097
Accession: 25982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000053930	G-patch	PF01585.23	4e-10	1	1
ENSCJAP00000011140	G-patch	PF01585.23	3.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000084815	GPATCH4-202	369	-	ENSCJAP00000053930	122 (aa)	-	A0A2R8M571
ENSCJAT00000011758	GPATCH4-201	1125	-	ENSCJAP00000011140	374 (aa)	-	F7I457

Gene Model

Click here to download ENSCJAG00000006048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000006048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000006048	GPATCH4	92	94.643	ENSCJAG00000031662	-	81	94.828
ENSCJAG00000006048	GPATCH4	92	87.500	ENSCJAG00000001883	-	92	87.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000006048	GPATCH4	100	93.443	ENSG00000160818	GPATCH4	100	93.443	Homo_sapiens
ENSCJAG00000006048	GPATCH4	85	47.748	ENSAPOG00000008436	gpatch4	52	46.602	Acanthochromis_polyacanthus
ENSCJAG00000006048	GPATCH4	92	90.179	ENSAMEG00000014829	GPATCH4	80	71.014	Ailuropoda_melanoleuca
ENSCJAG00000006048	GPATCH4	85	48.113	ENSACIG00000017309	-	69	55.952	Amphilophus_citrinellus
ENSCJAG00000006048	GPATCH4	70	53.488	ENSAOCG00000015494	gpatch4	52	44.444	Amphiprion_ocellaris
ENSCJAG00000006048	GPATCH4	70	53.488	ENSAPEG00000022243	gpatch4	52	44.928	Amphiprion_percula
ENSCJAG00000006048	GPATCH4	100	91.777	ENSANAG00000035354	GPATCH4	100	91.777	Aotus_nancymaae
ENSCJAG00000006048	GPATCH4	85	47.321	ENSACLG00000010456	gpatch4	67	48.246	Astatotilapia_calliptera
ENSCJAG00000006048	GPATCH4	85	44.643	ENSAMXG00000034049	gpatch4	75	44.286	Astyanax_mexicanus
ENSCJAG00000006048	GPATCH4	92	91.071	ENSBTAG00000000406	GPATCH4	84	72.046	Bos_taurus
ENSCJAG00000006048	GPATCH4	92	86.607	ENSCAFG00000016788	GPATCH4	90	59.211	Canis_familiaris
ENSCJAG00000006048	GPATCH4	94	86.087	ENSCAFG00020005274	-	90	86.087	Canis_lupus_dingo
ENSCJAG00000006048	GPATCH4	95	81.897	ENSCAFG00020006707	-	94	81.897	Canis_lupus_dingo
ENSCJAG00000006048	GPATCH4	92	90.179	ENSCHIG00000021295	GPATCH4	83	73.487	Capra_hircus
ENSCJAG00000006048	GPATCH4	94	93.913	ENSTSYG00000026904	-	81	93.913	Carlito_syrichta
ENSCJAG00000006048	GPATCH4	98	84.874	ENSCPOG00000013701	-	100	84.874	Cavia_porcellus
ENSCJAG00000006048	GPATCH4	100	100.000	ENSCCAG00000036114	GPATCH4	100	100.000	Cebus_capucinus
ENSCJAG00000006048	GPATCH4	92	98.214	ENSCATG00000042152	GPATCH4	78	99.099	Cercocebus_atys
ENSCJAG00000006048	GPATCH4	92	91.071	ENSCLAG00000002967	-	80	70.538	Chinchilla_lanigera
ENSCJAG00000006048	GPATCH4	92	99.107	ENSCSAG00000002161	GPATCH4	79	88.136	Chlorocebus_sabaeus
ENSCJAG00000006048	GPATCH4	92	54.622	ENSCPBG00000025803	GPATCH4	70	52.113	Chrysemys_picta_bellii
ENSCJAG00000006048	GPATCH4	85	43.220	ENSCING00000004717	-	70	42.286	Ciona_intestinalis
ENSCJAG00000006048	GPATCH4	76	41.000	ENSCSAVG00000003297	-	64	41.566	Ciona_savignyi
ENSCJAG00000006048	GPATCH4	92	98.214	ENSCANG00000030031	GPATCH4	97	84.573	Colobus_angolensis_palliatus
ENSCJAG00000006048	GPATCH4	92	87.500	ENSCGRG00001016898	Gpatch4	83	66.006	Cricetulus_griseus_chok1gshd
ENSCJAG00000006048	GPATCH4	92	87.500	ENSCGRG00000008399	Gpatch4	83	66.006	Cricetulus_griseus_crigri
ENSCJAG00000006048	GPATCH4	61	56.000	ENSCSEG00000012030	gpatch4	54	45.109	Cynoglossus_semilaevis
ENSCJAG00000006048	GPATCH4	91	46.218	ENSDARG00000091931	gpatch4	69	47.761	Danio_rerio
ENSCJAG00000006048	GPATCH4	92	90.179	ENSDNOG00000034673	GPATCH4	76	75.145	Dasypus_novemcinctus
ENSCJAG00000006048	GPATCH4	97	88.136	ENSDORG00000011332	-	80	88.136	Dipodomys_ordii
ENSCJAG00000006048	GPATCH4	60	46.575	FBgn0039829	CG15561	56	34.483	Drosophila_melanogaster
ENSCJAG00000006048	GPATCH4	92	87.500	ENSETEG00000000659	-	79	62.291	Echinops_telfairi
ENSCJAG00000006048	GPATCH4	50	45.902	ENSEBUG00000006498	-	55	41.916	Eptatretus_burgeri
ENSCJAG00000006048	GPATCH4	92	91.071	ENSEASG00005018284	GPATCH4	77	73.900	Equus_asinus_asinus
ENSCJAG00000006048	GPATCH4	93	90.265	ENSECAG00000011135	GPATCH4	96	74.780	Equus_caballus
ENSCJAG00000006048	GPATCH4	92	81.250	ENSEEUG00000003221	-	77	63.848	Erinaceus_europaeus
ENSCJAG00000006048	GPATCH4	88	92.523	ENSFCAG00000006554	GPATCH4	95	66.761	Felis_catus
ENSCJAG00000006048	GPATCH4	86	51.376	ENSFHEG00000003097	gpatch4	50	47.938	Fundulus_heteroclitus
ENSCJAG00000006048	GPATCH4	84	44.954	ENSGALG00000048365	GPATCH4	56	46.078	Gallus_gallus
ENSCJAG00000006048	GPATCH4	91	45.133	ENSGAFG00000021732	gpatch4	65	45.178	Gambusia_affinis
ENSCJAG00000006048	GPATCH4	75	52.747	ENSGACG00000013318	gpatch4	59	47.179	Gasterosteus_aculeatus
ENSCJAG00000006048	GPATCH4	92	56.303	ENSGAGG00000020710	GPATCH4	70	52.113	Gopherus_agassizii
ENSCJAG00000006048	GPATCH4	91	100.000	ENSGGOG00000000753	GPATCH4	100	89.362	Gorilla_gorilla
ENSCJAG00000006048	GPATCH4	85	47.321	ENSHBUG00000009675	gpatch4	66	48.246	Haplochromis_burtoni
ENSCJAG00000006048	GPATCH4	94	93.913	ENSHGLG00000011346	-	91	93.913	Heterocephalus_glaber_female
ENSCJAG00000006048	GPATCH4	95	92.241	ENSHGLG00100018277	-	80	92.241	Heterocephalus_glaber_male
ENSCJAG00000006048	GPATCH4	91	44.248	ENSHCOG00000007016	gpatch4	54	46.486	Hippocampus_comes
ENSCJAG00000006048	GPATCH4	91	50.847	ENSIPUG00000006348	gpatch4	62	48.108	Ictalurus_punctatus
ENSCJAG00000006048	GPATCH4	98	84.874	ENSSTOG00000020510	GPATCH4	91	84.874	Ictidomys_tridecemlineatus
ENSCJAG00000006048	GPATCH4	89	49.580	ENSKMAG00000015765	gpatch4	56	46.729	Kryptolebias_marmoratus
ENSCJAG00000006048	GPATCH4	86	48.182	ENSLBEG00000009364	-	65	45.116	Labrus_bergylta
ENSCJAG00000006048	GPATCH4	86	48.649	ENSLACG00000009700	GPATCH4	54	51.075	Latimeria_chalumnae
ENSCJAG00000006048	GPATCH4	92	62.644	ENSLAFG00000028327	-	82	60.784	Loxodonta_africana
ENSCJAG00000006048	GPATCH4	91	99.099	ENSMFAG00000030965	GPATCH4	100	88.329	Macaca_fascicularis
ENSCJAG00000006048	GPATCH4	92	99.107	ENSMMUG00000002624	GPATCH4	100	87.003	Macaca_mulatta
ENSCJAG00000006048	GPATCH4	91	99.099	ENSMNEG00000028844	GPATCH4	100	88.064	Macaca_nemestrina
ENSCJAG00000006048	GPATCH4	100	90.716	ENSMLEG00000037909	GPATCH4	100	88.594	Mandrillus_leucophaeus
ENSCJAG00000006048	GPATCH4	66	55.556	ENSMAMG00000010151	gpatch4	50	43.458	Mastacembelus_armatus
ENSCJAG00000006048	GPATCH4	85	47.321	ENSMZEG00005017452	gpatch4	53	45.588	Maylandia_zebra
ENSCJAG00000006048	GPATCH4	93	87.719	ENSMAUG00000008406	-	94	87.719	Mesocricetus_auratus
ENSCJAG00000006048	GPATCH4	88	93.458	ENSMICG00000013624	GPATCH4	100	77.105	Microcebus_murinus
ENSCJAG00000006048	GPATCH4	94	80.870	ENSMICG00000034025	-	97	80.870	Microcebus_murinus
ENSCJAG00000006048	GPATCH4	96	70.940	ENSMICG00000038615	-	89	77.451	Microcebus_murinus
ENSCJAG00000006048	GPATCH4	80	88.776	ENSMICG00000047155	-	88	88.776	Microcebus_murinus
ENSCJAG00000006048	GPATCH4	93	85.965	ENSMOCG00000008875	-	100	85.965	Microtus_ochrogaster
ENSCJAG00000006048	GPATCH4	88	50.467	ENSMMOG00000017095	gpatch4	96	50.467	Mola_mola
ENSCJAG00000006048	GPATCH4	91	63.158	ENSMODG00000014154	-	97	59.799	Monodelphis_domestica
ENSCJAG00000006048	GPATCH4	91	64.035	ENSMODG00000016818	-	70	62.944	Monodelphis_domestica
ENSCJAG00000006048	GPATCH4	92	85.714	MGP_CAROLIEiJ_G0025152	Gpatch4	82	82.234	Mus_caroli
ENSCJAG00000006048	GPATCH4	92	84.821	ENSMUSG00000028069	Gpatch4	82	80.711	Mus_musculus
ENSCJAG00000006048	GPATCH4	92	84.821	MGP_PahariEiJ_G0026595	-	97	77.586	Mus_pahari
ENSCJAG00000006048	GPATCH4	92	84.821	MGP_SPRETEiJ_G0026093	Gpatch4	82	81.218	Mus_spretus
ENSCJAG00000006048	GPATCH4	92	85.714	ENSMPUG00000004136	-	79	65.507	Mustela_putorius_furo
ENSCJAG00000006048	GPATCH4	92	90.179	ENSMLUG00000009571	GPATCH4	77	72.493	Myotis_lucifugus
ENSCJAG00000006048	GPATCH4	94	85.217	ENSNGAG00000019958	-	88	85.217	Nannospalax_galili
ENSCJAG00000006048	GPATCH4	100	91.512	ENSNLEG00000027678	GPATCH4	100	90.186	Nomascus_leucogenys
ENSCJAG00000006048	GPATCH4	91	65.766	ENSMEUG00000006861	-	72	55.897	Notamacropus_eugenii
ENSCJAG00000006048	GPATCH4	92	94.643	ENSOPRG00000000586	GPATCH4	86	66.935	Ochotona_princeps
ENSCJAG00000006048	GPATCH4	94	92.174	ENSODEG00000010437	-	98	89.744	Octodon_degus
ENSCJAG00000006048	GPATCH4	89	86.239	ENSODEG00000005222	-	95	86.239	Octodon_degus
ENSCJAG00000006048	GPATCH4	69	90.476	ENSODEG00000016849	-	75	92.683	Octodon_degus
ENSCJAG00000006048	GPATCH4	85	48.214	ENSONIG00000002261	gpatch4	53	45.894	Oreochromis_niloticus
ENSCJAG00000006048	GPATCH4	92	90.179	ENSOCUG00000025781	-	75	69.048	Oryctolagus_cuniculus
ENSCJAG00000006048	GPATCH4	84	47.573	ENSORLG00000016102	-	94	47.573	Oryzias_latipes
ENSCJAG00000006048	GPATCH4	86	41.739	ENSORLG00020013892	gpatch4	54	44.388	Oryzias_latipes_hni
ENSCJAG00000006048	GPATCH4	86	43.478	ENSORLG00015019725	gpatch4	55	44.388	Oryzias_latipes_hsok
ENSCJAG00000006048	GPATCH4	63	53.247	ENSOMEG00000000529	gpatch4	51	40.722	Oryzias_melastigma
ENSCJAG00000006048	GPATCH4	92	92.857	ENSOGAG00000006698	-	82	72.527	Otolemur_garnettii
ENSCJAG00000006048	GPATCH4	92	90.179	ENSOARG00000006123	GPATCH4	83	74.138	Ovis_aries
ENSCJAG00000006048	GPATCH4	91	100.000	ENSPPAG00000028364	-	78	100.000	Pan_paniscus
ENSCJAG00000006048	GPATCH4	88	92.523	ENSPPRG00000002106	GPATCH4	99	64.171	Panthera_pardus
ENSCJAG00000006048	GPATCH4	97	88.136	ENSPTIG00000006717	GPATCH4	84	88.136	Panthera_tigris_altaica
ENSCJAG00000006048	GPATCH4	91	100.000	ENSPTRG00000001464	GPATCH4	78	100.000	Pan_troglodytes
ENSCJAG00000006048	GPATCH4	91	100.000	ENSPANG00000018543	GPATCH4	100	88.859	Papio_anubis
ENSCJAG00000006048	GPATCH4	92	53.782	ENSPSIG00000011317	GPATCH4	68	54.872	Pelodiscus_sinensis
ENSCJAG00000006048	GPATCH4	96	42.400	ENSPMGG00000019375	-	87	42.400	Periophthalmus_magnuspinnatus
ENSCJAG00000006048	GPATCH4	84	46.491	ENSPMAG00000009175	gpatch4	67	47.959	Petromyzon_marinus
ENSCJAG00000006048	GPATCH4	91	44.144	ENSPFOG00000011835	gpatch4	50	45.408	Poecilia_formosa
ENSCJAG00000006048	GPATCH4	91	40.984	ENSPLAG00000019504	gpatch4	50	45.128	Poecilia_latipinna
ENSCJAG00000006048	GPATCH4	91	43.443	ENSPMEG00000001375	gpatch4	51	45.408	Poecilia_mexicana
ENSCJAG00000006048	GPATCH4	91	40.164	ENSPREG00000017029	gpatch4	53	43.878	Poecilia_reticulata
ENSCJAG00000006048	GPATCH4	92	99.107	ENSPPYG00000000711	-	79	91.243	Pongo_abelii
ENSCJAG00000006048	GPATCH4	97	93.277	ENSPCOG00000023130	-	81	93.277	Propithecus_coquereli
ENSCJAG00000006048	GPATCH4	92	82.143	ENSPCOG00000013948	-	85	81.967	Propithecus_coquereli
ENSCJAG00000006048	GPATCH4	91	86.486	ENSPVAG00000007505	-	87	60.056	Pteropus_vampyrus
ENSCJAG00000006048	GPATCH4	85	47.321	ENSPNYG00000018461	gpatch4	53	45.192	Pundamilia_nyererei
ENSCJAG00000006048	GPATCH4	92	86.607	ENSRNOG00000018969	Gpatch4	88	64.420	Rattus_norvegicus
ENSCJAG00000006048	GPATCH4	92	99.107	ENSRBIG00000005742	GPATCH4	93	90.136	Rhinopithecus_bieti
ENSCJAG00000006048	GPATCH4	92	99.107	ENSRROG00000044157	GPATCH4	96	87.941	Rhinopithecus_roxellana
ENSCJAG00000006048	GPATCH4	92	97.321	ENSSBOG00000024840	GPATCH4	79	88.701	Saimiri_boliviensis_boliviensis
ENSCJAG00000006048	GPATCH4	91	64.912	ENSSHAG00000015436	-	71	60.000	Sarcophilus_harrisii
ENSCJAG00000006048	GPATCH4	66	55.556	ENSSDUG00000006583	gpatch4	52	44.286	Seriola_dumerili
ENSCJAG00000006048	GPATCH4	85	45.614	ENSSLDG00000012365	gpatch4	52	44.286	Seriola_lalandi_dorsalis
ENSCJAG00000006048	GPATCH4	87	53.538	ENSSARG00000008606	-	76	50.769	Sorex_araneus
ENSCJAG00000006048	GPATCH4	92	55.462	ENSSPUG00000002674	GPATCH4	65	53.646	Sphenodon_punctatus
ENSCJAG00000006048	GPATCH4	85	46.491	ENSSPAG00000011683	gpatch4	52	43.256	Stegastes_partitus
ENSCJAG00000006048	GPATCH4	92	92.857	ENSSSCG00000006481	GPATCH4	76	76.012	Sus_scrofa
ENSCJAG00000006048	GPATCH4	88	47.863	ENSTRUG00000020638	-	87	49.593	Takifugu_rubripes
ENSCJAG00000006048	GPATCH4	68	57.831	ENSTNIG00000005156	gpatch4	74	45.413	Tetraodon_nigroviridis
ENSCJAG00000006048	GPATCH4	92	89.286	ENSTTRG00000001113	GPATCH4	86	71.105	Tursiops_truncatus
ENSCJAG00000006048	GPATCH4	92	90.179	ENSUAMG00000013407	GPATCH4	78	71.884	Ursus_americanus
ENSCJAG00000006048	GPATCH4	92	90.179	ENSUMAG00000017797	GPATCH4	78	71.594	Ursus_maritimus
ENSCJAG00000006048	GPATCH4	94	85.217	ENSVVUG00000006004	-	85	85.217	Vulpes_vulpes
ENSCJAG00000006048	GPATCH4	95	76.724	ENSVVUG00000019904	-	94	76.724	Vulpes_vulpes
ENSCJAG00000006048	GPATCH4	91	47.458	ENSXETG00000020397	gpatch4	64	47.917	Xenopus_tropicalis
ENSCJAG00000006048	GPATCH4	91	44.068	ENSXCOG00000003911	gpatch4	51	46.875	Xiphophorus_couchianus
ENSCJAG00000006048	GPATCH4	91	41.803	ENSXMAG00000024520	gpatch4	51	44.388	Xiphophorus_maculatus