EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000006074 (Gene tree)
Gene ID: 100411618
Gene Symbol: TDP2
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 17237 bases
Position: chrNTIC01022223.1:165625733-165642969
Accession: 100411618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000061153	Exo_endo_phos	PF03372.23	1.5e-07	1	1
ENSCJAP00000011182	Exo_endo_phos	PF03372.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000011800	-	1089	-	ENSCJAP00000011182	362 (aa)	-	F7HX74
ENSCJAT00000074550	-	915	-	ENSCJAP00000061153	304 (aa)	-	A0A2R8MKK0

Gene Model

Click here to download ENSCJAG00000006074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000006074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000006074	TDP2	100	98.619	ENSCJAG00000021963	-	100	98.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000006074	TDP2	100	91.989	ENSG00000111802	TDP2	100	91.989	Homo_sapiens
ENSCJAG00000006074	TDP2	86	54.340	ENSAPOG00000018379	-	91	54.340	Acanthochromis_polyacanthus
ENSCJAG00000006074	TDP2	92	87.097	ENSAMEG00000010230	TDP2	99	87.097	Ailuropoda_melanoleuca
ENSCJAG00000006074	TDP2	60	54.348	ENSAOCG00000010081	-	81	54.348	Amphiprion_ocellaris
ENSCJAG00000006074	TDP2	83	53.906	ENSAPEG00000004208	-	91	53.906	Amphiprion_percula
ENSCJAG00000006074	TDP2	89	48.905	ENSATEG00000010663	-	89	48.905	Anabas_testudineus
ENSCJAG00000006074	TDP2	93	65.672	ENSACAG00000002332	TDP2	94	64.265	Anolis_carolinensis
ENSCJAG00000006074	TDP2	100	96.409	ENSANAG00000020033	TDP2	100	96.409	Aotus_nancymaae
ENSCJAG00000006074	TDP2	91	49.462	ENSACLG00000016132	tdp2b	94	49.462	Astatotilapia_calliptera
ENSCJAG00000006074	TDP2	91	49.104	ENSACLG00000016174	tdp2b	94	49.104	Astatotilapia_calliptera
ENSCJAG00000006074	TDP2	88	54.444	ENSACLG00000016148	tdp2b	95	54.444	Astatotilapia_calliptera
ENSCJAG00000006074	TDP2	92	58.214	ENSAMXG00000011775	tdp2b	99	52.116	Astyanax_mexicanus
ENSCJAG00000006074	TDP2	89	49.635	ENSAMXG00000036549	tdp2a	92	48.754	Astyanax_mexicanus
ENSCJAG00000006074	TDP2	94	83.673	ENSBTAG00000000365	TDP2	100	81.868	Bos_taurus
ENSCJAG00000006074	TDP2	90	30.395	WBGene00013405	tdpt-1	85	30.395	Caenorhabditis_elegans
ENSCJAG00000006074	TDP2	92	88.889	ENSCAFG00000010428	TDP2	100	85.380	Canis_familiaris
ENSCJAG00000006074	TDP2	92	88.889	ENSCAFG00020009994	TDP2	96	88.889	Canis_lupus_dingo
ENSCJAG00000006074	TDP2	92	86.121	ENSCHIG00000015294	-	95	86.121	Capra_hircus
ENSCJAG00000006074	TDP2	96	84.228	ENSTSYG00000037199	TDP2	100	86.084	Carlito_syrichta
ENSCJAG00000006074	TDP2	100	85.083	ENSCPOG00000006390	TDP2	100	85.083	Cavia_porcellus
ENSCJAG00000006074	TDP2	100	97.238	ENSCCAG00000022734	TDP2	100	97.238	Cebus_capucinus
ENSCJAG00000006074	TDP2	100	89.803	ENSCATG00000022076	TDP2	100	89.803	Cercocebus_atys
ENSCJAG00000006074	TDP2	100	82.873	ENSCLAG00000002072	TDP2	100	82.873	Chinchilla_lanigera
ENSCJAG00000006074	TDP2	100	90.331	ENSCSAG00000007769	TDP2	100	90.331	Chlorocebus_sabaeus
ENSCJAG00000006074	TDP2	91	72.662	ENSCPBG00000006551	TDP2	91	67.039	Chrysemys_picta_bellii
ENSCJAG00000006074	TDP2	100	89.803	ENSCANG00000040122	TDP2	100	90.884	Colobus_angolensis_palliatus
ENSCJAG00000006074	TDP2	91	71.942	ENSCGRG00001000384	Tdp2	100	64.075	Cricetulus_griseus_chok1gshd
ENSCJAG00000006074	TDP2	91	71.942	ENSCGRG00000010250	Tdp2	95	65.130	Cricetulus_griseus_crigri
ENSCJAG00000006074	TDP2	92	57.295	ENSCVAG00000003114	tdp2b	95	56.140	Cyprinodon_variegatus
ENSCJAG00000006074	TDP2	84	48.846	ENSDARG00000069941	tdp2a	58	48.846	Danio_rerio
ENSCJAG00000006074	TDP2	91	56.491	ENSDARG00000035954	tdp2b	94	53.022	Danio_rerio
ENSCJAG00000006074	TDP2	100	84.254	ENSDNOG00000044082	TDP2	99	84.254	Dasypus_novemcinctus
ENSCJAG00000006074	TDP2	91	85.252	ENSETEG00000019096	TDP2	100	85.252	Echinops_telfairi
ENSCJAG00000006074	TDP2	87	53.008	ENSEBUG00000006535	tdp2a	62	53.008	Eptatretus_burgeri
ENSCJAG00000006074	TDP2	99	80.399	ENSEASG00005007656	TDP2	100	82.873	Equus_asinus_asinus
ENSCJAG00000006074	TDP2	99	80.399	ENSECAG00000014264	TDP2	100	82.873	Equus_caballus
ENSCJAG00000006074	TDP2	94	81.232	ENSEEUG00000010776	TDP2	100	79.282	Erinaceus_europaeus
ENSCJAG00000006074	TDP2	90	47.273	ENSELUG00000009321	tdp2a	85	47.619	Esox_lucius
ENSCJAG00000006074	TDP2	92	54.696	ENSELUG00000016449	tdp2b	95	54.696	Esox_lucius
ENSCJAG00000006074	TDP2	97	86.040	ENSFCAG00000025612	TDP2	97	86.040	Felis_catus
ENSCJAG00000006074	TDP2	91	64.388	ENSFALG00000004710	TDP2	98	58.427	Ficedula_albicollis
ENSCJAG00000006074	TDP2	92	87.097	ENSFDAG00000006512	TDP2	96	87.097	Fukomys_damarensis
ENSCJAG00000006074	TDP2	81	53.226	ENSFHEG00000013560	-	84	53.226	Fundulus_heteroclitus
ENSCJAG00000006074	TDP2	91	70.144	ENSGALG00000013637	TDP2	92	64.620	Gallus_gallus
ENSCJAG00000006074	TDP2	99	69.333	ENSGAGG00000002853	TDP2	88	68.786	Gopherus_agassizii
ENSCJAG00000006074	TDP2	100	91.713	ENSGGOG00000014237	TDP2	100	91.713	Gorilla_gorilla
ENSCJAG00000006074	TDP2	69	56.190	ENSHBUG00000005421	-	87	56.190	Haplochromis_burtoni
ENSCJAG00000006074	TDP2	96	54.795	ENSHBUG00000002714	tdp2b	99	54.795	Haplochromis_burtoni
ENSCJAG00000006074	TDP2	100	82.597	ENSHGLG00000008655	TDP2	100	82.597	Heterocephalus_glaber_female
ENSCJAG00000006074	TDP2	100	82.597	ENSHGLG00100019087	TDP2	100	82.597	Heterocephalus_glaber_male
ENSCJAG00000006074	TDP2	91	57.971	ENSIPUG00000013691	tdp2b	94	54.958	Ictalurus_punctatus
ENSCJAG00000006074	TDP2	91	70.863	ENSJJAG00000021685	Tdp2	99	66.377	Jaculus_jaculus
ENSCJAG00000006074	TDP2	85	51.724	ENSKMAG00000015485	-	84	51.724	Kryptolebias_marmoratus
ENSCJAG00000006074	TDP2	91	64.748	ENSLACG00000008852	TDP2	95	60.286	Latimeria_chalumnae
ENSCJAG00000006074	TDP2	91	59.712	ENSLOCG00000005817	tdp2b	99	59.712	Lepisosteus_oculatus
ENSCJAG00000006074	TDP2	99	82.060	ENSLAFG00000002567	TDP2	99	85.755	Loxodonta_africana
ENSCJAG00000006074	TDP2	100	89.803	ENSMFAG00000045296	TDP2	100	90.608	Macaca_fascicularis
ENSCJAG00000006074	TDP2	100	88.950	ENSMMUG00000009803	TDP2	100	90.608	Macaca_mulatta
ENSCJAG00000006074	TDP2	100	89.474	ENSMNEG00000038003	TDP2	100	90.608	Macaca_nemestrina
ENSCJAG00000006074	TDP2	100	90.132	ENSMLEG00000028883	TDP2	100	90.608	Mandrillus_leucophaeus
ENSCJAG00000006074	TDP2	93	55.523	ENSMAMG00000013654	tdp2b	95	55.523	Mastacembelus_armatus
ENSCJAG00000006074	TDP2	85	49.231	ENSMZEG00005004103	tdp2b	87	49.231	Maylandia_zebra
ENSCJAG00000006074	TDP2	82	53.175	ENSMZEG00005004055	tdp2b	83	53.175	Maylandia_zebra
ENSCJAG00000006074	TDP2	94	52.414	ENSMZEG00005004077	tdp2b	98	52.414	Maylandia_zebra
ENSCJAG00000006074	TDP2	96	54.294	ENSMZEG00005003950	tdp2b	99	54.294	Maylandia_zebra
ENSCJAG00000006074	TDP2	82	48.207	ENSMZEG00005003980	-	82	48.016	Maylandia_zebra
ENSCJAG00000006074	TDP2	94	49.135	ENSMZEG00005004126	tdp2b	94	50.179	Maylandia_zebra
ENSCJAG00000006074	TDP2	90	52.536	ENSMZEG00005004153	tdp2b	96	52.878	Maylandia_zebra
ENSCJAG00000006074	TDP2	91	71.223	ENSMGAG00000008014	TDP2	91	65.982	Meleagris_gallopavo
ENSCJAG00000006074	TDP2	91	71.942	ENSMAUG00000014451	Tdp2	93	66.571	Mesocricetus_auratus
ENSCJAG00000006074	TDP2	100	87.603	ENSMICG00000000039	TDP2	100	87.603	Microcebus_murinus
ENSCJAG00000006074	TDP2	91	73.741	ENSMOCG00000002823	Tdp2	93	68.588	Microtus_ochrogaster
ENSCJAG00000006074	TDP2	89	65.152	ENSMODG00000011653	TDP2	99	65.152	Monodelphis_domestica
ENSCJAG00000006074	TDP2	93	50.877	ENSMALG00000005368	-	93	50.877	Monopterus_albus
ENSCJAG00000006074	TDP2	91	73.381	MGP_CAROLIEiJ_G0018354	Tdp2	96	66.017	Mus_caroli
ENSCJAG00000006074	TDP2	91	74.460	ENSMUSG00000035958	Tdp2	94	67.622	Mus_musculus
ENSCJAG00000006074	TDP2	91	73.381	MGP_PahariEiJ_G0019417	Tdp2	94	66.286	Mus_pahari
ENSCJAG00000006074	TDP2	91	74.101	MGP_SPRETEiJ_G0019220	Tdp2	93	67.335	Mus_spretus
ENSCJAG00000006074	TDP2	91	88.129	ENSMPUG00000004516	TDP2	99	83.662	Mustela_putorius_furo
ENSCJAG00000006074	TDP2	97	75.852	ENSMLUG00000013506	TDP2	97	75.852	Myotis_lucifugus
ENSCJAG00000006074	TDP2	98	62.817	ENSNGAG00000001375	Tdp2	96	62.817	Nannospalax_galili
ENSCJAG00000006074	TDP2	100	91.713	ENSNLEG00000002447	TDP2	100	91.713	Nomascus_leucogenys
ENSCJAG00000006074	TDP2	96	82.133	ENSOPRG00000016299	TDP2	99	82.133	Ochotona_princeps
ENSCJAG00000006074	TDP2	96	88.014	ENSODEG00000014018	TDP2	99	88.014	Octodon_degus
ENSCJAG00000006074	TDP2	98	83.898	ENSOCUG00000013773	TDP2	98	83.898	Oryctolagus_cuniculus
ENSCJAG00000006074	TDP2	86	49.621	ENSORLG00000001661	-	97	49.248	Oryzias_latipes
ENSCJAG00000006074	TDP2	86	49.621	ENSORLG00020004634	-	97	49.248	Oryzias_latipes_hni
ENSCJAG00000006074	TDP2	87	43.820	ENSORLG00015008190	-	97	43.820	Oryzias_latipes_hsok
ENSCJAG00000006074	TDP2	87	47.547	ENSOMEG00000015899	-	92	50.403	Oryzias_melastigma
ENSCJAG00000006074	TDP2	100	85.083	ENSOGAG00000025303	TDP2	99	85.083	Otolemur_garnettii
ENSCJAG00000006074	TDP2	100	91.713	ENSPPAG00000029023	TDP2	100	91.713	Pan_paniscus
ENSCJAG00000006074	TDP2	97	85.470	ENSPPRG00000015398	TDP2	97	85.470	Panthera_pardus
ENSCJAG00000006074	TDP2	99	81.848	ENSPTIG00000018574	TDP2	95	86.691	Panthera_tigris_altaica
ENSCJAG00000006074	TDP2	100	91.713	ENSPTRG00000017778	TDP2	100	91.713	Pan_troglodytes
ENSCJAG00000006074	TDP2	100	89.474	ENSPANG00000017590	TDP2	100	90.608	Papio_anubis
ENSCJAG00000006074	TDP2	91	56.890	ENSPKIG00000006483	tdp2b	94	54.728	Paramormyrops_kingsleyae
ENSCJAG00000006074	TDP2	92	70.968	ENSPSIG00000004948	TDP2	100	69.178	Pelodiscus_sinensis
ENSCJAG00000006074	TDP2	91	73.741	ENSPEMG00000001788	Tdp2	94	68.481	Peromyscus_maniculatus_bairdii
ENSCJAG00000006074	TDP2	81	48.669	ENSPMAG00000001570	tdp2b	96	48.669	Petromyzon_marinus
ENSCJAG00000006074	TDP2	91	71.223	ENSPCIG00000007316	TDP2	90	67.151	Phascolarctos_cinereus
ENSCJAG00000006074	TDP2	81	50.000	ENSPFOG00000017990	-	90	50.000	Poecilia_formosa
ENSCJAG00000006074	TDP2	81	49.600	ENSPLAG00000019439	-	79	49.600	Poecilia_latipinna
ENSCJAG00000006074	TDP2	81	50.400	ENSPMEG00000010824	-	84	50.400	Poecilia_mexicana
ENSCJAG00000006074	TDP2	100	90.608	ENSPPYG00000016282	TDP2	92	90.608	Pongo_abelii
ENSCJAG00000006074	TDP2	100	89.503	ENSPCOG00000021415	TDP2	100	89.503	Propithecus_coquereli
ENSCJAG00000006074	TDP2	90	48.973	ENSPNYG00000011504	tdp2b	94	48.980	Pundamilia_nyererei
ENSCJAG00000006074	TDP2	96	53.740	ENSPNYG00000011532	tdp2b	99	53.740	Pundamilia_nyererei
ENSCJAG00000006074	TDP2	59	51.397	ENSPNYG00000001944	-	72	52.299	Pundamilia_nyererei
ENSCJAG00000006074	TDP2	86	51.538	ENSPNAG00000022162	tdp2a	66	51.538	Pygocentrus_nattereri
ENSCJAG00000006074	TDP2	92	72.857	ENSRNOG00000018246	Tdp2	95	66.571	Rattus_norvegicus
ENSCJAG00000006074	TDP2	100	89.803	ENSRBIG00000037119	TDP2	100	90.331	Rhinopithecus_bieti
ENSCJAG00000006074	TDP2	100	89.474	ENSRROG00000005025	TDP2	100	89.474	Rhinopithecus_roxellana
ENSCJAG00000006074	TDP2	100	95.304	ENSSBOG00000028734	TDP2	100	95.066	Saimiri_boliviensis_boliviensis
ENSCJAG00000006074	TDP2	99	64.674	ENSSHAG00000002506	TDP2	98	64.674	Sarcophilus_harrisii
ENSCJAG00000006074	TDP2	84	52.362	ENSSFOG00015011322	-	71	52.778	Scleropages_formosus
ENSCJAG00000006074	TDP2	91	78.136	ENSSARG00000013547	TDP2	100	78.136	Sorex_araneus
ENSCJAG00000006074	TDP2	99	62.903	ENSSPUG00000008288	TDP2	100	64.033	Sphenodon_punctatus
ENSCJAG00000006074	TDP2	100	83.425	ENSSSCG00000001092	TDP2	100	83.425	Sus_scrofa
ENSCJAG00000006074	TDP2	86	68.966	ENSTGUG00000009035	TDP2	100	68.966	Taeniopygia_guttata
ENSCJAG00000006074	TDP2	84	52.326	ENSTRUG00000012218	-	89	52.326	Takifugu_rubripes
ENSCJAG00000006074	TDP2	96	53.867	ENSTRUG00000014347	tdp2b	98	53.867	Takifugu_rubripes
ENSCJAG00000006074	TDP2	98	53.117	ENSTNIG00000017792	tdp2b	99	53.117	Tetraodon_nigroviridis
ENSCJAG00000006074	TDP2	83	53.640	ENSTNIG00000010260	TDP2	99	53.640	Tetraodon_nigroviridis
ENSCJAG00000006074	TDP2	94	85.924	ENSTTRG00000016376	TDP2	100	83.425	Tursiops_truncatus
ENSCJAG00000006074	TDP2	92	87.097	ENSUAMG00000025939	TDP2	98	80.342	Ursus_americanus
ENSCJAG00000006074	TDP2	99	82.060	ENSUMAG00000020111	TDP2	99	82.060	Ursus_maritimus
ENSCJAG00000006074	TDP2	95	67.010	ENSXETG00000014826	tdp2	98	61.957	Xenopus_tropicalis
ENSCJAG00000006074	TDP2	81	50.598	ENSXCOG00000010778	-	69	50.598	Xiphophorus_couchianus
ENSCJAG00000006074	TDP2	81	50.598	ENSXMAG00000022252	-	72	50.598	Xiphophorus_maculatus