EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCJAG00000006276 (Gene tree)
Gene ID
100407252
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Callithrix_jacchus
Status
putative
Strand
Minus strand
Length
52074 bases
Position
chrNTIC01005557.1:98600639-98652712
Accession
100407252
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCJAP00000011706CPSF73-100_CPF11718.81.2e-5411
ENSCJAP00000011657CPSF73-100_CPF11718.81.2e-5411
ENSCJAP00000011706Beta-CaspPF10996.86.8e-3411
ENSCJAP00000011657Beta-CaspPF10996.86.9e-3411
ENSCJAP00000011706Lactamase_BPF00753.271.6e-1811
ENSCJAP00000011657Lactamase_BPF00753.271.6e-1811
ENSCJAP00000011706RMMBLPF07521.121.8e-2111
ENSCJAP00000011657RMMBLPF07521.121.8e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCJAT00000012298CPSF3-2012055-ENSCJAP00000011657684 (aa)XP_002758090F7HIE0
ENSCJAT00000012349CPSF3-2022040-ENSCJAP00000011706679 (aa)-F7GM73
Gene Model
Click here to download ENSCJAG00000006276's gene model file
Pathways
Pathway IDPathway NameSource
cjc03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000006276's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCJAG00000006276CPSF36640.132ENSCJAG00000011144INTS118341.202
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCJAG00000006276CPSF310099.415ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCJAG00000006276CPSF39985.272ENSAPOG00000022087cpsf39885.272Acanthochromis_polyacanthus
ENSCJAG00000006276CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSCJAG00000006276CPSF310099.415ENSAMEG00000008493CPSF310099.415Ailuropoda_melanoleuca
ENSCJAG00000006276CPSF39286.190ENSACIG00000023663CPSF39986.190Amphilophus_citrinellus
ENSCJAG00000006276CPSF39282.643ENSACIG00000009846cpsf39982.643Amphilophus_citrinellus
ENSCJAG00000006276CPSF39987.794ENSAOCG00000010077CPSF39887.794Amphiprion_ocellaris
ENSCJAG00000006276CPSF39985.272ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSCJAG00000006276CPSF39985.420ENSAPEG00000019526cpsf39786.574Amphiprion_percula
ENSCJAG00000006276CPSF39987.794ENSAPEG00000021167CPSF39887.794Amphiprion_percula
ENSCJAG00000006276CPSF39983.088ENSATEG00000014525CPSF39883.088Anabas_testudineus
ENSCJAG00000006276CPSF39985.272ENSATEG00000003959cpsf39885.272Anabas_testudineus
ENSCJAG00000006276CPSF39895.802ENSAPLG00000006941CPSF39895.802Anas_platyrhynchos
ENSCJAG00000006276CPSF39392.756ENSACAG00000001759CPSF39992.756Anolis_carolinensis
ENSCJAG00000006276CPSF310092.836ENSANAG00000031254CPSF310092.836Aotus_nancymaae
ENSCJAG00000006276CPSF39885.564ENSACLG00000014484cpsf39985.564Astatotilapia_calliptera
ENSCJAG00000006276CPSF39286.032ENSACLG00000018846CPSF39986.032Astatotilapia_calliptera
ENSCJAG00000006276CPSF39988.088ENSAMXG00000004786cpsf39888.088Astyanax_mexicanus
ENSCJAG00000006276CPSF310099.269ENSBTAG00000019735CPSF310099.269Bos_taurus
ENSCJAG00000006276CPSF39159.213WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSCJAG00000006276CPSF310099.415ENSCAFG00000003375CPSF39599.415Canis_familiaris
ENSCJAG00000006276CPSF390100.000ENSCAFG00020026799CPSF3100100.000Canis_lupus_dingo
ENSCJAG00000006276CPSF310099.269ENSCHIG00000013973CPSF310099.269Capra_hircus
ENSCJAG00000006276CPSF310099.415ENSTSYG00000002967CPSF310099.415Carlito_syrichta
ENSCJAG00000006276CPSF39897.451ENSCAPG00000013851CPSF310097.451Cavia_aperea
ENSCJAG00000006276CPSF310097.515ENSCPOG00000011299CPSF310097.515Cavia_porcellus
ENSCJAG00000006276CPSF310099.854ENSCCAG00000036730CPSF310099.854Cebus_capucinus
ENSCJAG00000006276CPSF310097.080ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSCJAG00000006276CPSF310097.368ENSCLAG00000002727CPSF310097.368Chinchilla_lanigera
ENSCJAG00000006276CPSF310091.959ENSCSAG00000007125CPSF310091.959Chlorocebus_sabaeus
ENSCJAG00000006276CPSF387100.000ENSCHOG00000000180CPSF38572.281Choloepus_hoffmanni
ENSCJAG00000006276CPSF39995.601ENSCPBG00000014074CPSF39995.601Chrysemys_picta_bellii
ENSCJAG00000006276CPSF39967.883ENSCING00000007214-9867.883Ciona_intestinalis
ENSCJAG00000006276CPSF310086.257ENSCANG00000034435CPSF310086.257Colobus_angolensis_palliatus
ENSCJAG00000006276CPSF310098.830ENSCGRG00001013134Cpsf310098.830Cricetulus_griseus_chok1gshd
ENSCJAG00000006276CPSF310098.830ENSCGRG00000018319Cpsf310098.830Cricetulus_griseus_crigri
ENSCJAG00000006276CPSF39986.637ENSCSEG00000002021CPSF39986.399Cynoglossus_semilaevis
ENSCJAG00000006276CPSF39988.088ENSCVAG00000015067CPSF39888.088Cyprinodon_variegatus
ENSCJAG00000006276CPSF39988.824ENSDARG00000027649cpsf39888.824Danio_rerio
ENSCJAG00000006276CPSF310097.372ENSDNOG00000008940CPSF39597.372Dasypus_novemcinctus
ENSCJAG00000006276CPSF39599.078ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSCJAG00000006276CPSF39967.158FBgn0261065Cpsf739867.158Drosophila_melanogaster
ENSCJAG00000006276CPSF39585.868ENSETEG00000003893CPSF310085.868Echinops_telfairi
ENSCJAG00000006276CPSF39978.653ENSEBUG00000009018cpsf39878.797Eptatretus_burgeri
ENSCJAG00000006276CPSF310099.415ENSEASG00005003970CPSF310099.415Equus_asinus_asinus
ENSCJAG00000006276CPSF310099.415ENSECAG00000019911CPSF310099.415Equus_caballus
ENSCJAG00000006276CPSF310083.772ENSEEUG00000015422CPSF310083.772Erinaceus_europaeus
ENSCJAG00000006276CPSF39987.941ENSELUG00000013775cpsf39887.941Esox_lucius
ENSCJAG00000006276CPSF310099.269ENSFCAG00000007852CPSF310099.269Felis_catus
ENSCJAG00000006276CPSF39595.363ENSFALG00000006572CPSF310095.363Ficedula_albicollis
ENSCJAG00000006276CPSF39996.921ENSFDAG00000006317CPSF39996.921Fukomys_damarensis
ENSCJAG00000006276CPSF36068.537ENSFHEG00000012186CPSF39968.537Fundulus_heteroclitus
ENSCJAG00000006276CPSF39984.978ENSFHEG00000014774cpsf39884.978Fundulus_heteroclitus
ENSCJAG00000006276CPSF39986.471ENSGMOG00000003157cpsf39886.471Gadus_morhua
ENSCJAG00000006276CPSF39994.860ENSGALG00000016424CPSF39994.860Gallus_gallus
ENSCJAG00000006276CPSF39988.071ENSGAFG00000008016CPSF39888.071Gambusia_affinis
ENSCJAG00000006276CPSF39282.671ENSGAFG00000019449cpsf39982.671Gambusia_affinis
ENSCJAG00000006276CPSF36993.576ENSGAGG00000025583CPSF39393.576Gopherus_agassizii
ENSCJAG00000006276CPSF310097.139ENSGGOG00000001757CPSF310099.528Gorilla_gorilla
ENSCJAG00000006276CPSF39985.463ENSHBUG00000001188cpsf39985.463Haplochromis_burtoni
ENSCJAG00000006276CPSF36080.988ENSHBUG00000014332CPSF39980.988Haplochromis_burtoni
ENSCJAG00000006276CPSF310096.930ENSHGLG00000000666CPSF39996.930Heterocephalus_glaber_female
ENSCJAG00000006276CPSF310096.930ENSHGLG00100007765CPSF39996.930Heterocephalus_glaber_male
ENSCJAG00000006276CPSF39986.324ENSHCOG00000015957CPSF39786.324Hippocampus_comes
ENSCJAG00000006276CPSF39984.751ENSHCOG00000007251cpsf39984.751Hippocampus_comes
ENSCJAG00000006276CPSF39986.912ENSIPUG00000023488cpsf39886.912Ictalurus_punctatus
ENSCJAG00000006276CPSF310098.830ENSSTOG00000004476CPSF310098.830Ictidomys_tridecemlineatus
ENSCJAG00000006276CPSF310097.515ENSJJAG00000023415Cpsf310097.515Jaculus_jaculus
ENSCJAG00000006276CPSF39987.500ENSKMAG00000007317CPSF39887.500Kryptolebias_marmoratus
ENSCJAG00000006276CPSF39984.683ENSKMAG00000002806cpsf39884.683Kryptolebias_marmoratus
ENSCJAG00000006276CPSF39978.971ENSLBEG00000020569cpsf39478.971Labrus_bergylta
ENSCJAG00000006276CPSF35579.357ENSLBEG00000015018-9979.357Labrus_bergylta
ENSCJAG00000006276CPSF39588.889ENSLBEG00000013492CPSF39888.889Labrus_bergylta
ENSCJAG00000006276CPSF39983.947ENSLACG00000008308CPSF39883.947Latimeria_chalumnae
ENSCJAG00000006276CPSF39988.987ENSLOCG00000016823cpsf39888.987Lepisosteus_oculatus
ENSCJAG00000006276CPSF39898.651ENSLAFG00000009467CPSF310097.353Loxodonta_africana
ENSCJAG00000006276CPSF310099.708ENSMFAG00000001339CPSF310099.708Macaca_fascicularis
ENSCJAG00000006276CPSF39599.691ENSMMUG00000018038CPSF310099.691Macaca_mulatta
ENSCJAG00000006276CPSF310086.988ENSMNEG00000039447CPSF310086.988Macaca_nemestrina
ENSCJAG00000006276CPSF310099.561ENSMLEG00000026825CPSF310099.561Mandrillus_leucophaeus
ENSCJAG00000006276CPSF39285.127ENSMAMG00000008835CPSF39985.127Mastacembelus_armatus
ENSCJAG00000006276CPSF39985.567ENSMAMG00000003076cpsf39885.567Mastacembelus_armatus
ENSCJAG00000006276CPSF39985.463ENSMZEG00005014358cpsf39985.463Maylandia_zebra
ENSCJAG00000006276CPSF39988.235ENSMZEG00005006258CPSF39888.235Maylandia_zebra
ENSCJAG00000006276CPSF39894.903ENSMGAG00000013995CPSF310094.903Meleagris_gallopavo
ENSCJAG00000006276CPSF35597.074ENSMAUG00000000166Cpsf310097.074Mesocricetus_auratus
ENSCJAG00000006276CPSF310093.860ENSMICG00000002363CPSF310093.860Microcebus_murinus
ENSCJAG00000006276CPSF310094.298ENSMOCG00000020067Cpsf310094.298Microtus_ochrogaster
ENSCJAG00000006276CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSCJAG00000006276CPSF39582.171ENSMMOG00000018212CPSF39882.171Mola_mola
ENSCJAG00000006276CPSF310095.658ENSMODG00000014703CPSF310095.658Monodelphis_domestica
ENSCJAG00000006276CPSF39985.903ENSMALG00000016416cpsf39985.903Monopterus_albus
ENSCJAG00000006276CPSF39383.125ENSMALG00000011474CPSF39983.125Monopterus_albus
ENSCJAG00000006276CPSF310098.538MGP_CAROLIEiJ_G0017640Cpsf310098.538Mus_caroli
ENSCJAG00000006276CPSF310098.538ENSMUSG00000054309Cpsf310098.538Mus_musculus
ENSCJAG00000006276CPSF310098.392MGP_PahariEiJ_G0029397Cpsf310098.392Mus_pahari
ENSCJAG00000006276CPSF310098.538MGP_SPRETEiJ_G0018481Cpsf310098.538Mus_spretus
ENSCJAG00000006276CPSF310098.684ENSMPUG00000013213CPSF310098.684Mustela_putorius_furo
ENSCJAG00000006276CPSF310098.248ENSMLUG00000010636CPSF310098.248Myotis_lucifugus
ENSCJAG00000006276CPSF310098.684ENSNGAG00000019836Cpsf310098.684Nannospalax_galili
ENSCJAG00000006276CPSF39985.022ENSNBRG00000004770cpsf39985.022Neolamprologus_brichardi
ENSCJAG00000006276CPSF39286.032ENSNBRG00000010525CPSF39986.032Neolamprologus_brichardi
ENSCJAG00000006276CPSF310099.708ENSNLEG00000013359CPSF310099.708Nomascus_leucogenys
ENSCJAG00000006276CPSF310065.497ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSCJAG00000006276CPSF310089.620ENSOPRG00000008902CPSF310089.620Ochotona_princeps
ENSCJAG00000006276CPSF310097.076ENSODEG00000003129CPSF310097.076Octodon_degus
ENSCJAG00000006276CPSF39985.609ENSONIG00000018812cpsf39985.609Oreochromis_niloticus
ENSCJAG00000006276CPSF38396.099ENSOANG00000008577CPSF310096.099Ornithorhynchus_anatinus
ENSCJAG00000006276CPSF310098.830ENSOCUG00000003728CPSF310098.830Oryctolagus_cuniculus
ENSCJAG00000006276CPSF39983.407ENSORLG00000018854cpsf39983.407Oryzias_latipes
ENSCJAG00000006276CPSF39983.407ENSORLG00020013331cpsf39983.407Oryzias_latipes_hni
ENSCJAG00000006276CPSF39983.407ENSORLG00015011017cpsf39983.407Oryzias_latipes_hsok
ENSCJAG00000006276CPSF39983.700ENSOMEG00000010647cpsf39483.700Oryzias_melastigma
ENSCJAG00000006276CPSF310089.474ENSOGAG00000001680CPSF310089.474Otolemur_garnettii
ENSCJAG00000006276CPSF310099.269ENSOARG00000015073CPSF310099.269Ovis_aries
ENSCJAG00000006276CPSF310099.561ENSPPAG00000042457CPSF310099.561Pan_paniscus
ENSCJAG00000006276CPSF310098.977ENSPPRG00000016790CPSF310098.977Panthera_pardus
ENSCJAG00000006276CPSF39998.971ENSPTIG00000003920CPSF310098.898Panthera_tigris_altaica
ENSCJAG00000006276CPSF310099.561ENSPTRG00000011638CPSF310099.561Pan_troglodytes
ENSCJAG00000006276CPSF310099.561ENSPANG00000016798CPSF310099.561Papio_anubis
ENSCJAG00000006276CPSF39989.412ENSPKIG00000023646cpsf39989.147Paramormyrops_kingsleyae
ENSCJAG00000006276CPSF39993.851ENSPSIG00000016144CPSF310093.851Pelodiscus_sinensis
ENSCJAG00000006276CPSF38385.340ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSCJAG00000006276CPSF36079.012ENSPMGG00000015311CPSF39979.012Periophthalmus_magnuspinnatus
ENSCJAG00000006276CPSF310098.246ENSPEMG00000017668Cpsf310098.246Peromyscus_maniculatus_bairdii
ENSCJAG00000006276CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSCJAG00000006276CPSF39897.151ENSPCIG00000009823CPSF39897.239Phascolarctos_cinereus
ENSCJAG00000006276CPSF39987.776ENSPFOG00000010418-9887.776Poecilia_formosa
ENSCJAG00000006276CPSF39984.604ENSPFOG00000015922cpsf39984.604Poecilia_formosa
ENSCJAG00000006276CPSF35980.693ENSPLAG00000021300-9980.693Poecilia_latipinna
ENSCJAG00000006276CPSF39984.604ENSPLAG00000000882cpsf39984.604Poecilia_latipinna
ENSCJAG00000006276CPSF39984.751ENSPMEG00000018309cpsf39984.751Poecilia_mexicana
ENSCJAG00000006276CPSF39982.474ENSPREG00000004482CPSF39882.474Poecilia_reticulata
ENSCJAG00000006276CPSF39282.512ENSPREG00000014875cpsf39982.512Poecilia_reticulata
ENSCJAG00000006276CPSF310095.322ENSPPYG00000012666CPSF310095.322Pongo_abelii
ENSCJAG00000006276CPSF39563.594ENSPCAG00000015042CPSF310063.594Procavia_capensis
ENSCJAG00000006276CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSCJAG00000006276CPSF39999.267ENSPVAG00000005324CPSF39999.267Pteropus_vampyrus
ENSCJAG00000006276CPSF38091.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSCJAG00000006276CPSF39985.463ENSPNYG00000004405cpsf39985.463Pundamilia_nyererei
ENSCJAG00000006276CPSF39987.500ENSPNAG00000023060cpsf39887.500Pygocentrus_nattereri
ENSCJAG00000006276CPSF39998.534ENSRNOG00000052418Cpsf39998.534Rattus_norvegicus
ENSCJAG00000006276CPSF310093.567ENSRBIG00000041615CPSF39994.900Rhinopithecus_bieti
ENSCJAG00000006276CPSF310099.561ENSRROG00000033792CPSF310099.561Rhinopithecus_roxellana
ENSCJAG00000006276CPSF39440.537YLR277CYSH19540.671Saccharomyces_cerevisiae
ENSCJAG00000006276CPSF310093.478ENSSBOG00000027263CPSF310093.478Saimiri_boliviensis_boliviensis
ENSCJAG00000006276CPSF310097.368ENSSHAG00000007024CPSF310097.368Sarcophilus_harrisii
ENSCJAG00000006276CPSF39989.427ENSSFOG00015002108cpsf39989.427Scleropages_formosus
ENSCJAG00000006276CPSF39587.500ENSSMAG00000020534CPSF39587.500Scophthalmus_maximus
ENSCJAG00000006276CPSF39985.463ENSSDUG00000002828cpsf39685.463Seriola_dumerili
ENSCJAG00000006276CPSF39987.941ENSSDUG00000018498CPSF39887.941Seriola_dumerili
ENSCJAG00000006276CPSF39985.463ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSCJAG00000006276CPSF39987.941ENSSLDG00000005234CPSF39887.941Seriola_lalandi_dorsalis
ENSCJAG00000006276CPSF310080.994ENSSARG00000005186CPSF310080.994Sorex_araneus
ENSCJAG00000006276CPSF39892.399ENSSPUG00000015525CPSF39792.399Sphenodon_punctatus
ENSCJAG00000006276CPSF39987.647ENSSPAG00000002906CPSF39887.647Stegastes_partitus
ENSCJAG00000006276CPSF39985.420ENSSPAG00000018579cpsf39885.420Stegastes_partitus
ENSCJAG00000006276CPSF39999.268ENSSSCG00000020799CPSF39999.268Sus_scrofa
ENSCJAG00000006276CPSF39995.448ENSTGUG00000013016CPSF39995.448Taeniopygia_guttata
ENSCJAG00000006276CPSF39984.853ENSTRUG00000007030cpsf39784.853Takifugu_rubripes
ENSCJAG00000006276CPSF35972.973ENSTRUG00000013905CPSF39972.973Takifugu_rubripes
ENSCJAG00000006276CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSCJAG00000006276CPSF38897.312ENSTTRG00000000861CPSF38897.312Tursiops_truncatus
ENSCJAG00000006276CPSF39996.334ENSUAMG00000007535CPSF39896.334Ursus_americanus
ENSCJAG00000006276CPSF39599.382ENSUMAG00000003676CPSF310099.382Ursus_maritimus
ENSCJAG00000006276CPSF39395.426ENSVPAG00000008041CPSF310095.426Vicugna_pacos
ENSCJAG00000006276CPSF310099.415ENSVVUG00000002194CPSF310099.415Vulpes_vulpes
ENSCJAG00000006276CPSF39990.015ENSXETG00000008263cpsf39890.015Xenopus_tropicalis
ENSCJAG00000006276CPSF39984.897ENSXCOG00000019695cpsf39984.897Xiphophorus_couchianus
ENSCJAG00000006276CPSF35579.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSCJAG00000006276CPSF39987.923ENSXMAG00000027291CPSF39887.923Xiphophorus_maculatus
ENSCJAG00000006276CPSF39984.604ENSXMAG00000009784cpsf39984.604Xiphophorus_maculatus

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