EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000006512 (Gene tree)
Gene ID: 100400674
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 63071 bases
Position: chrNTIC01038834.1:7634167-7697237
Accession: 100400674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000012203	PAP_RNA-bind	PF04926.15	4.4e-25	1	1
ENSCJAP00000061544	PAP_RNA-bind	PF04926.15	7.8e-25	1	1
ENSCJAP00000052754	PAP_RNA-bind	PF04926.15	7.7e-23	1	1
ENSCJAP00000012197	PAP_RNA-bind	PF04926.15	8.5e-23	1	1
ENSCJAP00000012206	PAP_RNA-bind	PF04926.15	8.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000081609	PAPOLA-203	4313	XM_009006525	ENSCJAP00000061544	699 (aa)	XP_009004773	A0A2R8PDR8
ENSCJAT00000012870	PAPOLA-205	1647	-	ENSCJAP00000012203	548 (aa)	-	F7GTG4
ENSCJAT00000012873	PAPOLA-201	4451	XM_002754265	ENSCJAP00000012206	745 (aa)	XP_002754311	F7GTF8
ENSCJAT00000079410	PAPOLA-206	948	-	ENSCJAP00000057179	315 (aa)	-	A0A2R8N124
ENSCJAT00000012864	PAPOLA-204	2232	-	ENSCJAP00000012197	743 (aa)	-	F7HE64
ENSCJAT00000078329	PAPOLA-202	4388	XM_009006524	ENSCJAP00000052754	724 (aa)	XP_009004772	A0A2R8M2P8

Gene Model

Click here to download ENSCJAG00000006512's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000006512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000006512	PAPOLA	98	73.529	ENSCJAG00000009102	PAPOLG	99	60.431

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000006512	PAPOLA	100	99.597	ENSG00000090060	PAPOLA	100	99.597	Homo_sapiens
ENSCJAG00000006512	PAPOLA	99	99.081	ENSAMEG00000014142	PAPOLA	99	97.446	Ailuropoda_melanoleuca
ENSCJAG00000006512	PAPOLA	99	96.697	ENSAPLG00000006645	PAPOLA	99	90.310	Anas_platyrhynchos
ENSCJAG00000006512	PAPOLA	99	97.794	ENSACAG00000013474	PAPOLA	99	94.737	Anolis_carolinensis
ENSCJAG00000006512	PAPOLA	100	99.818	ENSANAG00000018274	PAPOLA	100	99.818	Aotus_nancymaae
ENSCJAG00000006512	PAPOLA	97	91.902	ENSANAG00000027941	-	98	91.948	Aotus_nancymaae
ENSCJAG00000006512	PAPOLA	97	86.817	ENSAMXG00000018141	papola	98	85.949	Astyanax_mexicanus
ENSCJAG00000006512	PAPOLA	99	98.897	ENSBTAG00000004054	PAPOLA	100	97.425	Bos_taurus
ENSCJAG00000006512	PAPOLA	99	99.081	ENSCAFG00000017783	PAPOLA	100	96.804	Canis_familiaris
ENSCJAG00000006512	PAPOLA	99	99.079	ENSCAFG00020011550	PAPOLA	99	99.014	Canis_lupus_dingo
ENSCJAG00000006512	PAPOLA	99	98.897	ENSCHIG00000025004	-	100	96.913	Capra_hircus
ENSCJAG00000006512	PAPOLA	99	99.081	ENSTSYG00000012384	PAPOLA	99	97.126	Carlito_syrichta
ENSCJAG00000006512	PAPOLA	100	93.562	ENSCPOG00000002648	PAPOLA	100	93.562	Cavia_porcellus
ENSCJAG00000006512	PAPOLA	100	99.866	ENSCCAG00000025120	PAPOLA	100	99.866	Cebus_capucinus
ENSCJAG00000006512	PAPOLA	100	99.732	ENSCATG00000018815	PAPOLA	100	99.732	Cercocebus_atys
ENSCJAG00000006512	PAPOLA	99	99.449	ENSCLAG00000016342	PAPOLA	100	97.711	Chinchilla_lanigera
ENSCJAG00000006512	PAPOLA	100	99.732	ENSCSAG00000010516	PAPOLA	100	99.732	Chlorocebus_sabaeus
ENSCJAG00000006512	PAPOLA	72	83.030	ENSCHOG00000001115	PAPOLA	72	83.030	Choloepus_hoffmanni
ENSCJAG00000006512	PAPOLA	99	97.426	ENSCPBG00000024125	PAPOLA	100	92.493	Chrysemys_picta_bellii
ENSCJAG00000006512	PAPOLA	100	94.482	ENSCANG00000000159	PAPOLA	100	94.482	Colobus_angolensis_palliatus
ENSCJAG00000006512	PAPOLA	99	98.532	ENSCGRG00001022693	-	100	96.567	Cricetulus_griseus_chok1gshd
ENSCJAG00000006512	PAPOLA	99	90.257	ENSCGRG00001000229	-	99	89.871	Cricetulus_griseus_chok1gshd
ENSCJAG00000006512	PAPOLA	99	84.473	ENSCGRG00001002732	-	99	83.602	Cricetulus_griseus_chok1gshd
ENSCJAG00000006512	PAPOLA	99	98.532	ENSCGRG00000003664	-	100	96.552	Cricetulus_griseus_crigri
ENSCJAG00000006512	PAPOLA	97	82.090	ENSCGRG00000001888	-	96	78.854	Cricetulus_griseus_crigri
ENSCJAG00000006512	PAPOLA	99	85.294	ENSCGRG00000000257	-	100	83.708	Cricetulus_griseus_crigri
ENSCJAG00000006512	PAPOLA	88	54.167	ENSCSEG00000001841	-	71	54.167	Cynoglossus_semilaevis
ENSCJAG00000006512	PAPOLA	99	84.615	ENSDARG00000009585	papola	100	71.154	Danio_rerio
ENSCJAG00000006512	PAPOLA	65	90.167	ENSDORG00000013415	-	100	88.703	Dipodomys_ordii
ENSCJAG00000006512	PAPOLA	99	84.375	ENSETEG00000004889	PAPOLA	100	83.176	Echinops_telfairi
ENSCJAG00000006512	PAPOLA	97	84.991	ENSELUG00000018972	papola	100	68.833	Esox_lucius
ENSCJAG00000006512	PAPOLA	100	98.140	ENSFCAG00000006784	PAPOLA	100	98.140	Felis_catus
ENSCJAG00000006512	PAPOLA	99	96.507	ENSFALG00000002547	PAPOLA	98	87.076	Ficedula_albicollis
ENSCJAG00000006512	PAPOLA	99	99.081	ENSFDAG00000010370	PAPOLA	100	95.833	Fukomys_damarensis
ENSCJAG00000006512	PAPOLA	62	87.647	ENSGMOG00000010209	papola	100	66.102	Gadus_morhua
ENSCJAG00000006512	PAPOLA	99	96.875	ENSGALG00000033099	PAPOLA	100	89.678	Gallus_gallus
ENSCJAG00000006512	PAPOLA	88	54.583	ENSGACG00000006142	-	100	54.167	Gasterosteus_aculeatus
ENSCJAG00000006512	PAPOLA	99	97.426	ENSGAGG00000020500	PAPOLA	99	94.760	Gopherus_agassizii
ENSCJAG00000006512	PAPOLA	100	99.597	ENSGGOG00000006287	PAPOLA	100	99.597	Gorilla_gorilla
ENSCJAG00000006512	PAPOLA	100	84.522	ENSHGLG00000017457	-	100	84.054	Heterocephalus_glaber_female
ENSCJAG00000006512	PAPOLA	89	92.021	ENSHGLG00000007467	-	100	78.121	Heterocephalus_glaber_female
ENSCJAG00000006512	PAPOLA	99	99.081	ENSHGLG00000007909	-	100	96.853	Heterocephalus_glaber_female
ENSCJAG00000006512	PAPOLA	99	98.897	ENSHGLG00100017273	PAPOLA	100	96.710	Heterocephalus_glaber_male
ENSCJAG00000006512	PAPOLA	99	83.948	ENSIPUG00000005919	papola	90	84.375	Ictalurus_punctatus
ENSCJAG00000006512	PAPOLA	99	99.449	ENSSTOG00000011471	PAPOLA	100	98.140	Ictidomys_tridecemlineatus
ENSCJAG00000006512	PAPOLA	99	98.529	ENSJJAG00000024340	Papola	100	96.983	Jaculus_jaculus
ENSCJAG00000006512	PAPOLA	99	85.897	ENSLACG00000018136	PAPOLA	99	76.707	Latimeria_chalumnae
ENSCJAG00000006512	PAPOLA	99	76.630	ENSLOCG00000008632	papola	99	65.426	Lepisosteus_oculatus
ENSCJAG00000006512	PAPOLA	99	98.162	ENSLAFG00000000946	PAPOLA	99	96.226	Loxodonta_africana
ENSCJAG00000006512	PAPOLA	100	99.732	ENSMFAG00000001792	PAPOLA	100	99.732	Macaca_fascicularis
ENSCJAG00000006512	PAPOLA	100	99.732	ENSMMUG00000018610	PAPOLA	100	99.732	Macaca_mulatta
ENSCJAG00000006512	PAPOLA	100	99.732	ENSMNEG00000043747	PAPOLA	100	99.732	Macaca_nemestrina
ENSCJAG00000006512	PAPOLA	100	99.732	ENSMLEG00000032066	PAPOLA	100	99.732	Mandrillus_leucophaeus
ENSCJAG00000006512	PAPOLA	78	97.430	ENSMGAG00000013228	-	100	88.535	Meleagris_gallopavo
ENSCJAG00000006512	PAPOLA	99	99.081	ENSMAUG00000017178	Papola	100	96.996	Mesocricetus_auratus
ENSCJAG00000006512	PAPOLA	99	99.632	ENSMICG00000010347	PAPOLA	100	98.204	Microcebus_murinus
ENSCJAG00000006512	PAPOLA	99	98.897	ENSMOCG00000021670	Papola	100	96.996	Microtus_ochrogaster
ENSCJAG00000006512	PAPOLA	99	86.055	ENSMODG00000001969	-	99	82.271	Monodelphis_domestica
ENSCJAG00000006512	PAPOLA	99	98.346	ENSMODG00000012887	-	100	96.107	Monodelphis_domestica
ENSCJAG00000006512	PAPOLA	99	98.346	MGP_CAROLIEiJ_G0018093	Papola	100	95.994	Mus_caroli
ENSCJAG00000006512	PAPOLA	99	98.346	ENSMUSG00000021111	Papola	100	96.280	Mus_musculus
ENSCJAG00000006512	PAPOLA	99	98.346	MGP_PahariEiJ_G0029850	Papola	100	96.280	Mus_pahari
ENSCJAG00000006512	PAPOLA	99	98.346	MGP_SPRETEiJ_G0018943	Papola	100	96.423	Mus_spretus
ENSCJAG00000006512	PAPOLA	99	98.897	ENSMPUG00000003054	PAPOLA	100	97.718	Mustela_putorius_furo
ENSCJAG00000006512	PAPOLA	99	98.162	ENSMLUG00000010922	PAPOLA	100	95.302	Myotis_lucifugus
ENSCJAG00000006512	PAPOLA	99	98.162	ENSNGAG00000022172	Papola	100	96.567	Nannospalax_galili
ENSCJAG00000006512	PAPOLA	100	94.282	ENSNLEG00000000625	PAPOLA	100	94.282	Nomascus_leucogenys
ENSCJAG00000006512	PAPOLA	67	85.507	ENSMEUG00000007831	-	74	84.962	Notamacropus_eugenii
ENSCJAG00000006512	PAPOLA	98	91.460	ENSOPRG00000007625	PAPOLA	100	91.460	Ochotona_princeps
ENSCJAG00000006512	PAPOLA	87	54.412	ENSONIG00000001062	-	96	54.412	Oreochromis_niloticus
ENSCJAG00000006512	PAPOLA	99	98.529	ENSOANG00000013812	PAPOLA	99	96.413	Ornithorhynchus_anatinus
ENSCJAG00000006512	PAPOLA	99	95.229	ENSOCUG00000011531	PAPOLA	99	94.482	Oryctolagus_cuniculus
ENSCJAG00000006512	PAPOLA	99	99.449	ENSOGAG00000004611	PAPOLA	100	97.718	Otolemur_garnettii
ENSCJAG00000006512	PAPOLA	99	98.897	ENSOARG00000016579	-	100	97.181	Ovis_aries
ENSCJAG00000006512	PAPOLA	100	99.597	ENSPPAG00000030505	PAPOLA	100	99.597	Pan_paniscus
ENSCJAG00000006512	PAPOLA	99	99.081	ENSPPRG00000008616	PAPOLA	100	98.066	Panthera_pardus
ENSCJAG00000006512	PAPOLA	99	99.081	ENSPTIG00000018852	PAPOLA	99	98.058	Panthera_tigris_altaica
ENSCJAG00000006512	PAPOLA	100	99.597	ENSPTRG00000006704	PAPOLA	100	99.597	Pan_troglodytes
ENSCJAG00000006512	PAPOLA	100	99.732	ENSPANG00000025582	PAPOLA	100	99.732	Papio_anubis
ENSCJAG00000006512	PAPOLA	98	86.245	ENSPKIG00000014471	papola	100	69.974	Paramormyrops_kingsleyae
ENSCJAG00000006512	PAPOLA	99	97.243	ENSPSIG00000014157	PAPOLA	87	92.627	Pelodiscus_sinensis
ENSCJAG00000006512	PAPOLA	99	98.713	ENSPEMG00000000043	Papola	100	96.853	Peromyscus_maniculatus_bairdii
ENSCJAG00000006512	PAPOLA	99	98.346	ENSPCIG00000013234	PAPOLA	100	95.710	Phascolarctos_cinereus
ENSCJAG00000006512	PAPOLA	100	97.181	ENSPPYG00000006128	PAPOLA	100	97.181	Pongo_abelii
ENSCJAG00000006512	PAPOLA	84	97.186	ENSPCAG00000004199	PAPOLA	100	89.879	Procavia_capensis
ENSCJAG00000006512	PAPOLA	100	94.616	ENSPCOG00000022117	PAPOLA	99	94.737	Propithecus_coquereli
ENSCJAG00000006512	PAPOLA	99	98.346	ENSPVAG00000013925	PAPOLA	100	96.242	Pteropus_vampyrus
ENSCJAG00000006512	PAPOLA	98	86.406	ENSPNAG00000010467	papola	100	71.955	Pygocentrus_nattereri
ENSCJAG00000006512	PAPOLA	99	98.162	ENSRNOG00000004827	Papola	100	94.765	Rattus_norvegicus
ENSCJAG00000006512	PAPOLA	99	98.852	ENSRBIG00000038490	PAPOLA	100	98.852	Rhinopithecus_bieti
ENSCJAG00000006512	PAPOLA	100	99.597	ENSRROG00000025545	PAPOLA	100	99.597	Rhinopithecus_roxellana
ENSCJAG00000006512	PAPOLA	100	99.596	ENSSBOG00000024061	PAPOLA	100	99.596	Saimiri_boliviensis_boliviensis
ENSCJAG00000006512	PAPOLA	99	98.346	ENSSHAG00000015211	PAPOLA	99	95.822	Sarcophilus_harrisii
ENSCJAG00000006512	PAPOLA	99	86.322	ENSSFOG00015004431	papola	98	86.347	Scleropages_formosus
ENSCJAG00000006512	PAPOLA	88	58.299	ENSSDUG00000018247	-	72	58.058	Seriola_dumerili
ENSCJAG00000006512	PAPOLA	99	97.426	ENSSPUG00000005835	PAPOLA	100	92.225	Sphenodon_punctatus
ENSCJAG00000006512	PAPOLA	99	98.897	ENSSSCG00000002505	-	100	97.854	Sus_scrofa
ENSCJAG00000006512	PAPOLA	99	96.691	ENSTGUG00000012687	PAPOLA	99	89.892	Taeniopygia_guttata
ENSCJAG00000006512	PAPOLA	75	88.043	ENSTBEG00000000194	PAPOLA	74	88.043	Tupaia_belangeri
ENSCJAG00000006512	PAPOLA	94	90.310	ENSTTRG00000005717	PAPOLA	80	97.403	Tursiops_truncatus
ENSCJAG00000006512	PAPOLA	77	99.289	ENSUAMG00000025737	PAPOLA	98	99.289	Ursus_americanus
ENSCJAG00000006512	PAPOLA	99	98.529	ENSVPAG00000006464	PAPOLA	100	96.900	Vicugna_pacos
ENSCJAG00000006512	PAPOLA	99	99.081	ENSVVUG00000028340	PAPOLA	100	97.854	Vulpes_vulpes
ENSCJAG00000006512	PAPOLA	99	92.687	ENSXETG00000013949	papola	100	82.615	Xenopus_tropicalis