EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000006778 (Gene tree)
Gene ID: 100399527
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 81635 bases
Position: chrNTIC01033278.1:73637889-73719523
Accession: 100399527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000012710	ResIII	PF04851.15	3.1e-10	1	1
ENSCJAP00000049075	ResIII	PF04851.15	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000013392	SMARCAD1-201	3922	-	ENSCJAP00000012710	1025 (aa)	XP_002745629	F6SDI3
ENSCJAT00000060638	SMARCAD1-202	3313	-	ENSCJAP00000049075	1025 (aa)	XP_002745629	F6SDI3

Gene Model

Click here to download ENSCJAG00000006778's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000006778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000006778	SMARCAD1	51	38.434	ENSCJAG00000015819	HELLS	77	38.434
ENSCJAG00000006778	SMARCAD1	50	30.018	ENSCJAG00000021080	RAD54L	63	30.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000006778	SMARCAD1	100	99.318	ENSG00000163104	SMARCAD1	100	99.832	Homo_sapiens
ENSCJAG00000006778	SMARCAD1	69	62.748	ENSAPOG00000011446	smarcad1a	66	62.748	Acanthochromis_polyacanthus
ENSCJAG00000006778	SMARCAD1	100	97.082	ENSAMEG00000005844	SMARCAD1	100	97.082	Ailuropoda_melanoleuca
ENSCJAG00000006778	SMARCAD1	68	68.587	ENSACIG00000018326	smarcad1a	100	68.587	Amphilophus_citrinellus
ENSCJAG00000006778	SMARCAD1	100	62.748	ENSAOCG00000019762	smarcad1a	96	62.748	Amphiprion_ocellaris
ENSCJAG00000006778	SMARCAD1	100	62.890	ENSAPEG00000003889	smarcad1a	96	62.890	Amphiprion_percula
ENSCJAG00000006778	SMARCAD1	87	62.781	ENSATEG00000015608	smarcad1a	93	62.781	Anabas_testudineus
ENSCJAG00000006778	SMARCAD1	94	72.239	ENSAPLG00000004630	SMARCAD1	100	72.962	Anas_platyrhynchos
ENSCJAG00000006778	SMARCAD1	100	69.671	ENSACAG00000013554	SMARCAD1	100	70.320	Anolis_carolinensis
ENSCJAG00000006778	SMARCAD1	100	99.514	ENSANAG00000020488	SMARCAD1	100	99.514	Aotus_nancymaae
ENSCJAG00000006778	SMARCAD1	98	62.500	ENSACLG00000017063	smarcad1a	99	61.308	Astatotilapia_calliptera
ENSCJAG00000006778	SMARCAD1	70	60.362	ENSAMXG00000015470	smarcad1a	99	60.362	Astyanax_mexicanus
ENSCJAG00000006778	SMARCAD1	77	59.433	ENSAMXG00000019130	smarcad1b	85	60.025	Astyanax_mexicanus
ENSCJAG00000006778	SMARCAD1	100	96.404	ENSBTAG00000017061	SMARCAD1	100	96.404	Bos_taurus
ENSCJAG00000006778	SMARCAD1	61	42.879	WBGene00010845	M03C11.8	70	40.788	Caenorhabditis_elegans
ENSCJAG00000006778	SMARCAD1	100	96.595	ENSCAFG00000010026	SMARCAD1	100	96.595	Canis_familiaris
ENSCJAG00000006778	SMARCAD1	87	97.638	ENSCAFG00020003994	SMARCAD1	99	97.638	Canis_lupus_dingo
ENSCJAG00000006778	SMARCAD1	100	96.887	ENSCHIG00000012905	SMARCAD1	100	96.887	Capra_hircus
ENSCJAG00000006778	SMARCAD1	100	97.663	ENSTSYG00000002706	SMARCAD1	100	97.663	Carlito_syrichta
ENSCJAG00000006778	SMARCAD1	90	78.195	ENSCAPG00000016744	SMARCAD1	96	78.964	Cavia_aperea
ENSCJAG00000006778	SMARCAD1	100	94.574	ENSCPOG00000011398	SMARCAD1	100	94.574	Cavia_porcellus
ENSCJAG00000006778	SMARCAD1	100	99.610	ENSCCAG00000022264	SMARCAD1	100	99.832	Cebus_capucinus
ENSCJAG00000006778	SMARCAD1	100	99.123	ENSCATG00000035663	SMARCAD1	100	99.123	Cercocebus_atys
ENSCJAG00000006778	SMARCAD1	82	99.643	ENSCSAG00000004186	SMARCAD1	100	99.643	Chlorocebus_sabaeus
ENSCJAG00000006778	SMARCAD1	100	73.679	ENSCPBG00000013203	SMARCAD1	100	74.352	Chrysemys_picta_bellii
ENSCJAG00000006778	SMARCAD1	64	49.700	ENSCING00000001688	-	99	49.700	Ciona_intestinalis
ENSCJAG00000006778	SMARCAD1	100	98.928	ENSCANG00000003556	SMARCAD1	100	99.832	Colobus_angolensis_palliatus
ENSCJAG00000006778	SMARCAD1	100	93.366	ENSCGRG00001015056	Smarcad1	100	93.366	Cricetulus_griseus_chok1gshd
ENSCJAG00000006778	SMARCAD1	100	93.366	ENSCGRG00000014087	Smarcad1	100	93.366	Cricetulus_griseus_crigri
ENSCJAG00000006778	SMARCAD1	100	62.391	ENSCSEG00000017903	smarcad1a	100	46.344	Cynoglossus_semilaevis
ENSCJAG00000006778	SMARCAD1	84	60.632	ENSCSEG00000014419	-	93	57.371	Cynoglossus_semilaevis
ENSCJAG00000006778	SMARCAD1	85	54.476	ENSDARG00000014041	smarcad1a	92	55.678	Danio_rerio
ENSCJAG00000006778	SMARCAD1	78	57.934	ENSDARG00000073721	smarcad1b	82	59.137	Danio_rerio
ENSCJAG00000006778	SMARCAD1	100	96.199	ENSDNOG00000000806	-	100	96.199	Dasypus_novemcinctus
ENSCJAG00000006778	SMARCAD1	100	92.996	ENSDORG00000012331	Smarcad1	100	92.996	Dipodomys_ordii
ENSCJAG00000006778	SMARCAD1	63	45.538	FBgn0032157	Etl1	90	40.319	Drosophila_melanogaster
ENSCJAG00000006778	SMARCAD1	62	45.552	ENSEBUG00000003969	smarcad1a	96	46.191	Eptatretus_burgeri
ENSCJAG00000006778	SMARCAD1	100	97.082	ENSEASG00005012382	SMARCAD1	100	97.082	Equus_asinus_asinus
ENSCJAG00000006778	SMARCAD1	100	97.082	ENSECAG00000011562	SMARCAD1	100	97.082	Equus_caballus
ENSCJAG00000006778	SMARCAD1	79	56.590	ENSELUG00000019154	smarcad1b	79	58.440	Esox_lucius
ENSCJAG00000006778	SMARCAD1	100	52.085	ENSELUG00000018535	smarcad1a	100	51.944	Esox_lucius
ENSCJAG00000006778	SMARCAD1	100	96.592	ENSFCAG00000003958	SMARCAD1	100	98.826	Felis_catus
ENSCJAG00000006778	SMARCAD1	100	67.568	ENSFALG00000006089	SMARCAD1	100	67.375	Ficedula_albicollis
ENSCJAG00000006778	SMARCAD1	100	95.712	ENSFDAG00000017027	SMARCAD1	100	95.712	Fukomys_damarensis
ENSCJAG00000006778	SMARCAD1	94	65.321	ENSFHEG00000012778	smarcad1a	87	62.483	Fundulus_heteroclitus
ENSCJAG00000006778	SMARCAD1	84	57.719	ENSGMOG00000018995	smarcad1a	97	57.488	Gadus_morhua
ENSCJAG00000006778	SMARCAD1	77	74.083	ENSGALG00000037339	SMARCAD1	94	74.713	Gallus_gallus
ENSCJAG00000006778	SMARCAD1	90	66.667	ENSGAFG00000013498	smarcad1a	60	66.667	Gambusia_affinis
ENSCJAG00000006778	SMARCAD1	85	58.050	ENSGACG00000007327	smarcad1a	99	57.937	Gasterosteus_aculeatus
ENSCJAG00000006778	SMARCAD1	100	73.558	ENSGAGG00000008582	SMARCAD1	100	73.938	Gopherus_agassizii
ENSCJAG00000006778	SMARCAD1	100	99.415	ENSGGOG00000023001	SMARCAD1	100	99.415	Gorilla_gorilla
ENSCJAG00000006778	SMARCAD1	98	62.358	ENSHBUG00000011042	smarcad1a	99	61.172	Haplochromis_burtoni
ENSCJAG00000006778	SMARCAD1	100	95.821	ENSHGLG00000005070	SMARCAD1	100	95.821	Heterocephalus_glaber_female
ENSCJAG00000006778	SMARCAD1	100	95.821	ENSHGLG00100006812	SMARCAD1	100	95.821	Heterocephalus_glaber_male
ENSCJAG00000006778	SMARCAD1	99	63.764	ENSHCOG00000007848	smarcad1a	94	62.462	Hippocampus_comes
ENSCJAG00000006778	SMARCAD1	81	56.921	ENSIPUG00000022817	smarcad1b	89	57.432	Ictalurus_punctatus
ENSCJAG00000006778	SMARCAD1	76	65.102	ENSIPUG00000000242	smarcad1a	90	63.393	Ictalurus_punctatus
ENSCJAG00000006778	SMARCAD1	100	97.176	ENSSTOG00000001227	SMARCAD1	100	97.176	Ictidomys_tridecemlineatus
ENSCJAG00000006778	SMARCAD1	100	95.906	ENSJJAG00000022342	Smarcad1	100	95.906	Jaculus_jaculus
ENSCJAG00000006778	SMARCAD1	64	64.350	ENSKMAG00000021351	smarcad1a	65	61.473	Kryptolebias_marmoratus
ENSCJAG00000006778	SMARCAD1	65	65.821	ENSLBEG00000008088	smarcad1a	63	65.821	Labrus_bergylta
ENSCJAG00000006778	SMARCAD1	100	54.278	ENSLOCG00000012909	smarcad1a	100	54.934	Lepisosteus_oculatus
ENSCJAG00000006778	SMARCAD1	100	94.542	ENSLAFG00000000040	SMARCAD1	100	94.542	Loxodonta_africana
ENSCJAG00000006778	SMARCAD1	100	98.830	ENSMFAG00000042606	SMARCAD1	100	98.830	Macaca_fascicularis
ENSCJAG00000006778	SMARCAD1	86	99.323	ENSMMUG00000022242	SMARCAD1	99	99.323	Macaca_mulatta
ENSCJAG00000006778	SMARCAD1	100	98.733	ENSMNEG00000038117	SMARCAD1	100	99.664	Macaca_nemestrina
ENSCJAG00000006778	SMARCAD1	100	99.025	ENSMLEG00000038333	SMARCAD1	100	99.832	Mandrillus_leucophaeus
ENSCJAG00000006778	SMARCAD1	98	63.738	ENSMAMG00000000933	smarcad1a	92	63.561	Mastacembelus_armatus
ENSCJAG00000006778	SMARCAD1	98	62.500	ENSMZEG00005005203	smarcad1a	100	49.771	Maylandia_zebra
ENSCJAG00000006778	SMARCAD1	94	65.191	ENSMGAG00000005577	SMARCAD1	100	65.191	Meleagris_gallopavo
ENSCJAG00000006778	SMARCAD1	100	93.366	ENSMAUG00000008417	Smarcad1	100	93.366	Mesocricetus_auratus
ENSCJAG00000006778	SMARCAD1	100	96.696	ENSMICG00000009746	SMARCAD1	100	96.696	Microcebus_murinus
ENSCJAG00000006778	SMARCAD1	100	93.171	ENSMOCG00000017142	Smarcad1	100	93.171	Microtus_ochrogaster
ENSCJAG00000006778	SMARCAD1	77	58.616	ENSMMOG00000000275	smarcad1a	92	64.382	Mola_mola
ENSCJAG00000006778	SMARCAD1	100	81.546	ENSMODG00000019268	SMARCAD1	100	81.546	Monodelphis_domestica
ENSCJAG00000006778	SMARCAD1	95	93.743	MGP_CAROLIEiJ_G0028458	-	77	93.743	Mus_caroli
ENSCJAG00000006778	SMARCAD1	100	92.300	ENSMUSG00000029920	Smarcad1	100	92.300	Mus_musculus
ENSCJAG00000006778	SMARCAD1	100	92.593	MGP_PahariEiJ_G0022198	Smarcad1	100	92.593	Mus_pahari
ENSCJAG00000006778	SMARCAD1	100	92.300	MGP_SPRETEiJ_G0029462	Smarcad1	100	92.300	Mus_spretus
ENSCJAG00000006778	SMARCAD1	100	97.082	ENSMPUG00000002111	SMARCAD1	100	97.082	Mustela_putorius_furo
ENSCJAG00000006778	SMARCAD1	100	93.580	ENSMLUG00000000425	SMARCAD1	100	93.580	Myotis_lucifugus
ENSCJAG00000006778	SMARCAD1	100	94.439	ENSNGAG00000000810	Smarcad1	100	94.439	Nannospalax_galili
ENSCJAG00000006778	SMARCAD1	66	63.274	ENSNBRG00000012749	smarcad1a	85	61.367	Neolamprologus_brichardi
ENSCJAG00000006778	SMARCAD1	100	99.415	ENSNLEG00000014225	SMARCAD1	100	99.832	Nomascus_leucogenys
ENSCJAG00000006778	SMARCAD1	100	94.947	ENSODEG00000004334	SMARCAD1	100	94.947	Octodon_degus
ENSCJAG00000006778	SMARCAD1	63	66.049	ENSONIG00000015059	smarcad1a	100	52.077	Oreochromis_niloticus
ENSCJAG00000006778	SMARCAD1	80	84.662	ENSOANG00000013764	SMARCAD1	100	84.662	Ornithorhynchus_anatinus
ENSCJAG00000006778	SMARCAD1	100	97.268	ENSOCUG00000017283	SMARCAD1	100	97.268	Oryctolagus_cuniculus
ENSCJAG00000006778	SMARCAD1	65	65.060	ENSORLG00000004869	smarcad1a	69	61.348	Oryzias_latipes
ENSCJAG00000006778	SMARCAD1	65	65.060	ENSORLG00020020569	smarcad1a	68	60.996	Oryzias_latipes_hni
ENSCJAG00000006778	SMARCAD1	65	64.910	ENSORLG00015009045	smarcad1a	69	61.348	Oryzias_latipes_hsok
ENSCJAG00000006778	SMARCAD1	65	64.812	ENSOMEG00000023032	smarcad1a	69	60.905	Oryzias_melastigma
ENSCJAG00000006778	SMARCAD1	100	96.599	ENSOGAG00000011444	SMARCAD1	100	96.599	Otolemur_garnettii
ENSCJAG00000006778	SMARCAD1	100	96.790	ENSOARG00000017851	SMARCAD1	100	96.790	Ovis_aries
ENSCJAG00000006778	SMARCAD1	100	99.318	ENSPPAG00000035715	SMARCAD1	100	99.318	Pan_paniscus
ENSCJAG00000006778	SMARCAD1	100	96.689	ENSPPRG00000024756	SMARCAD1	100	98.826	Panthera_pardus
ENSCJAG00000006778	SMARCAD1	100	96.501	ENSPTIG00000017868	SMARCAD1	100	96.501	Panthera_tigris_altaica
ENSCJAG00000006778	SMARCAD1	100	99.415	ENSPTRG00000023126	SMARCAD1	100	99.832	Pan_troglodytes
ENSCJAG00000006778	SMARCAD1	100	97.668	ENSPANG00000019757	SMARCAD1	100	97.668	Papio_anubis
ENSCJAG00000006778	SMARCAD1	100	73.058	ENSPSIG00000010255	SMARCAD1	100	73.154	Pelodiscus_sinensis
ENSCJAG00000006778	SMARCAD1	63	64.230	ENSPMGG00000010735	smarcad1a	95	62.722	Periophthalmus_magnuspinnatus
ENSCJAG00000006778	SMARCAD1	100	78.829	ENSPEMG00000001854	Smarcad1	100	79.122	Peromyscus_maniculatus_bairdii
ENSCJAG00000006778	SMARCAD1	99	46.422	ENSPMAG00000003516	smarcad1a	99	46.806	Petromyzon_marinus
ENSCJAG00000006778	SMARCAD1	77	87.484	ENSPCIG00000008137	SMARCAD1	98	88.874	Phascolarctos_cinereus
ENSCJAG00000006778	SMARCAD1	63	66.615	ENSPFOG00000019116	smarcad1a	64	62.430	Poecilia_formosa
ENSCJAG00000006778	SMARCAD1	63	66.459	ENSPLAG00000000108	smarcad1a	64	62.291	Poecilia_latipinna
ENSCJAG00000006778	SMARCAD1	63	66.615	ENSPMEG00000009155	smarcad1a	64	62.430	Poecilia_mexicana
ENSCJAG00000006778	SMARCAD1	100	63.714	ENSPREG00000018185	smarcad1a	94	62.587	Poecilia_reticulata
ENSCJAG00000006778	SMARCAD1	100	98.832	ENSPPYG00000014935	SMARCAD1	100	98.832	Pongo_abelii
ENSCJAG00000006778	SMARCAD1	73	97.236	ENSPCOG00000020478	SMARCAD1	89	97.236	Propithecus_coquereli
ENSCJAG00000006778	SMARCAD1	100	95.238	ENSPVAG00000001760	SMARCAD1	100	95.238	Pteropus_vampyrus
ENSCJAG00000006778	SMARCAD1	67	62.154	ENSPNYG00000010087	smarcad1a	86	60.948	Pundamilia_nyererei
ENSCJAG00000006778	SMARCAD1	78	58.426	ENSPNAG00000010099	smarcad1b	84	60.050	Pygocentrus_nattereri
ENSCJAG00000006778	SMARCAD1	100	50.426	ENSPNAG00000001663	smarcad1a	100	49.535	Pygocentrus_nattereri
ENSCJAG00000006778	SMARCAD1	100	93.275	ENSRNOG00000006391	Smarcad1	100	93.275	Rattus_norvegicus
ENSCJAG00000006778	SMARCAD1	100	98.928	ENSRBIG00000041989	SMARCAD1	100	98.928	Rhinopithecus_bieti
ENSCJAG00000006778	SMARCAD1	100	98.928	ENSRROG00000035309	SMARCAD1	100	98.928	Rhinopithecus_roxellana
ENSCJAG00000006778	SMARCAD1	100	99.513	ENSSBOG00000032114	SMARCAD1	100	99.832	Saimiri_boliviensis_boliviensis
ENSCJAG00000006778	SMARCAD1	100	82.319	ENSSHAG00000001279	SMARCAD1	100	82.415	Sarcophilus_harrisii
ENSCJAG00000006778	SMARCAD1	100	50.838	ENSSFOG00015016814	smarcad1b	100	50.694	Scleropages_formosus
ENSCJAG00000006778	SMARCAD1	75	57.513	ENSSFOG00015020909	smarcad1a	100	57.513	Scleropages_formosus
ENSCJAG00000006778	SMARCAD1	97	64.470	ENSSMAG00000001326	smarcad1a	95	64.470	Scophthalmus_maximus
ENSCJAG00000006778	SMARCAD1	68	63.558	ENSSDUG00000022338	smarcad1a	84	62.325	Seriola_dumerili
ENSCJAG00000006778	SMARCAD1	63	66.459	ENSSLDG00000024986	smarcad1a	100	48.399	Seriola_lalandi_dorsalis
ENSCJAG00000006778	SMARCAD1	58	84.590	ENSSPUG00000004633	SMARCAD1	100	84.590	Sphenodon_punctatus
ENSCJAG00000006778	SMARCAD1	100	63.506	ENSSPAG00000001970	smarcad1a	95	63.506	Stegastes_partitus
ENSCJAG00000006778	SMARCAD1	100	96.887	ENSSSCG00000009193	SMARCAD1	100	98.098	Sus_scrofa
ENSCJAG00000006778	SMARCAD1	76	77.934	ENSTGUG00000003127	SMARCAD1	100	78.189	Taeniopygia_guttata
ENSCJAG00000006778	SMARCAD1	84	57.339	ENSTNIG00000017585	smarcad1a	99	57.666	Tetraodon_nigroviridis
ENSCJAG00000006778	SMARCAD1	91	97.619	ENSTBEG00000002789	SMARCAD1	91	97.619	Tupaia_belangeri
ENSCJAG00000006778	SMARCAD1	98	95.730	ENSTTRG00000000226	SMARCAD1	100	95.730	Tursiops_truncatus
ENSCJAG00000006778	SMARCAD1	100	96.790	ENSUAMG00000022262	SMARCAD1	99	97.965	Ursus_americanus
ENSCJAG00000006778	SMARCAD1	100	97.079	ENSUMAG00000004549	SMARCAD1	100	97.079	Ursus_maritimus
ENSCJAG00000006778	SMARCAD1	100	96.304	ENSVVUG00000007271	SMARCAD1	100	97.622	Vulpes_vulpes
ENSCJAG00000006778	SMARCAD1	84	65.757	ENSXETG00000019214	smarcad1	100	65.643	Xenopus_tropicalis
ENSCJAG00000006778	SMARCAD1	76	59.021	ENSXCOG00000005232	smarcad1a	94	53.810	Xiphophorus_couchianus
ENSCJAG00000006778	SMARCAD1	63	66.303	ENSXMAG00000015350	smarcad1a	64	61.818	Xiphophorus_maculatus