EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000006864 (Gene tree)
Gene ID: 100392626
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 8059 bases
Position: chrNTIC01006668.1:27859533-27867591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000012734	GN3L_Grn1	PF08701.11	1.7e-21	1	1
ENSCJAP00000012734	MMR_HSR1	PF01926.23	3.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000013417	-	1629	-	ENSCJAP00000012734	542 (aa)	-	F6S302

Gene Model

Click here to download ENSCJAG00000006864's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000006864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000006864	-	78	39.627	ENSCJAG00000000252	GNL3L	74	39.627
ENSCJAG00000006864	-	100	99.815	ENSCJAG00000044256	-	100	99.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000006864	-	100	92.350	ENSG00000163938	GNL3	100	95.833	Homo_sapiens
ENSCJAG00000006864	-	99	45.520	ENSAPOG00000004048	gnl3	99	46.237	Acanthochromis_polyacanthus
ENSCJAG00000006864	-	100	78.986	ENSAMEG00000008456	GNL3	100	78.986	Ailuropoda_melanoleuca
ENSCJAG00000006864	-	99	45.307	ENSACIG00000000545	gnl3	99	45.027	Amphilophus_citrinellus
ENSCJAG00000006864	-	99	45.893	ENSAOCG00000012879	gnl3	99	45.893	Amphiprion_ocellaris
ENSCJAG00000006864	-	99	46.607	ENSAPEG00000006146	gnl3	99	46.607	Amphiprion_percula
ENSCJAG00000006864	-	99	45.633	ENSATEG00000024242	gnl3	99	45.633	Anabas_testudineus
ENSCJAG00000006864	-	96	48.897	ENSAPLG00000005171	GNL3	100	49.631	Anas_platyrhynchos
ENSCJAG00000006864	-	100	52.536	ENSACAG00000007357	GNL3	100	52.527	Anolis_carolinensis
ENSCJAG00000006864	-	100	95.948	ENSANAG00000033209	GNL3	100	95.948	Aotus_nancymaae
ENSCJAG00000006864	-	99	45.355	ENSACLG00000007381	gnl3	99	45.173	Astatotilapia_calliptera
ENSCJAG00000006864	-	100	42.883	ENSAMXG00000020880	gnl3	100	43.386	Astyanax_mexicanus
ENSCJAG00000006864	-	100	75.862	ENSBTAG00000014549	GNL3	100	76.407	Bos_taurus
ENSCJAG00000006864	-	100	77.132	ENSCAFG00000009004	GNL3	100	79.710	Canis_familiaris
ENSCJAG00000006864	-	89	82.780	ENSCAFG00020002613	GNL3	100	78.327	Canis_lupus_dingo
ENSCJAG00000006864	-	100	76.407	ENSCHIG00000022181	GNL3	100	77.132	Capra_hircus
ENSCJAG00000006864	-	100	79.890	ENSTSYG00000006851	GNL3	100	80.622	Carlito_syrichta
ENSCJAG00000006864	-	100	72.243	ENSCPOG00000000282	GNL3	100	72.243	Cavia_porcellus
ENSCJAG00000006864	-	100	95.018	ENSCCAG00000033281	GNL3	100	95.018	Cebus_capucinus
ENSCJAG00000006864	-	100	91.803	ENSCATG00000040886	GNL3	100	91.803	Cercocebus_atys
ENSCJAG00000006864	-	100	76.407	ENSCLAG00000010109	-	100	76.407	Chinchilla_lanigera
ENSCJAG00000006864	-	100	92.364	ENSCSAG00000013315	GNL3	100	92.364	Chlorocebus_sabaeus
ENSCJAG00000006864	-	100	74.731	ENSCHOG00000002726	GNL3	100	74.731	Choloepus_hoffmanni
ENSCJAG00000006864	-	75	50.117	ENSCPBG00000018330	-	95	51.748	Chrysemys_picta_bellii
ENSCJAG00000006864	-	98	91.993	ENSCANG00000039969	GNL3	100	91.993	Colobus_angolensis_palliatus
ENSCJAG00000006864	-	100	73.063	ENSCGRG00001020950	Gnl3	100	73.063	Cricetulus_griseus_chok1gshd
ENSCJAG00000006864	-	100	73.063	ENSCGRG00000015225	Gnl3	100	73.063	Cricetulus_griseus_crigri
ENSCJAG00000006864	-	99	45.213	ENSCSEG00000005009	gnl3	100	45.213	Cynoglossus_semilaevis
ENSCJAG00000006864	-	99	44.144	ENSCVAG00000010679	gnl3	99	44.144	Cyprinodon_variegatus
ENSCJAG00000006864	-	100	43.440	ENSDARG00000006219	gnl3	100	43.640	Danio_rerio
ENSCJAG00000006864	-	100	77.798	ENSDNOG00000001037	GNL3	100	78.159	Dasypus_novemcinctus
ENSCJAG00000006864	-	100	73.985	ENSDORG00000000674	Gnl3	100	74.723	Dipodomys_ordii
ENSCJAG00000006864	-	100	62.821	ENSETEG00000016534	-	87	97.015	Echinops_telfairi
ENSCJAG00000006864	-	100	79.348	ENSEASG00005014636	GNL3	100	79.348	Equus_asinus_asinus
ENSCJAG00000006864	-	100	79.348	ENSECAG00000014850	GNL3	100	79.348	Equus_caballus
ENSCJAG00000006864	-	99	72.610	ENSEEUG00000004427	GNL3	100	72.610	Erinaceus_europaeus
ENSCJAG00000006864	-	99	45.730	ENSELUG00000008767	gnl3	99	45.907	Esox_lucius
ENSCJAG00000006864	-	100	78.804	ENSFCAG00000015719	GNL3	100	78.804	Felis_catus
ENSCJAG00000006864	-	99	52.000	ENSFALG00000008957	GNL3	99	52.555	Ficedula_albicollis
ENSCJAG00000006864	-	100	75.646	ENSFDAG00000020679	GNL3	100	75.830	Fukomys_damarensis
ENSCJAG00000006864	-	87	47.727	ENSFHEG00000020897	gnl3	99	45.144	Fundulus_heteroclitus
ENSCJAG00000006864	-	99	41.637	ENSGMOG00000001745	gnl3	99	41.459	Gadus_morhua
ENSCJAG00000006864	-	100	51.712	ENSGALG00000001613	GNL3	100	52.144	Gallus_gallus
ENSCJAG00000006864	-	99	39.122	ENSGAFG00000007184	gnl3	99	38.828	Gambusia_affinis
ENSCJAG00000006864	-	99	44.464	ENSGACG00000000309	gnl3	99	45.293	Gasterosteus_aculeatus
ENSCJAG00000006864	-	78	51.111	ENSGAGG00000021579	-	99	52.000	Gopherus_agassizii
ENSCJAG00000006864	-	100	92.350	ENSGGOG00000011444	GNL3	100	92.350	Gorilla_gorilla
ENSCJAG00000006864	-	87	48.665	ENSHBUG00000001340	gnl3	99	45.179	Haplochromis_burtoni
ENSCJAG00000006864	-	100	76.867	ENSHGLG00000018299	GNL3	100	77.231	Heterocephalus_glaber_female
ENSCJAG00000006864	-	99	43.088	ENSHCOG00000009446	gnl3	99	44.043	Hippocampus_comes
ENSCJAG00000006864	-	99	42.413	ENSIPUG00000023677	gnl3	99	43.144	Ictalurus_punctatus
ENSCJAG00000006864	-	100	78.080	ENSSTOG00000000356	GNL3	100	78.080	Ictidomys_tridecemlineatus
ENSCJAG00000006864	-	99	73.481	ENSJJAG00000021993	Gnl3	100	73.481	Jaculus_jaculus
ENSCJAG00000006864	-	99	44.964	ENSKMAG00000005965	gnl3	99	45.504	Kryptolebias_marmoratus
ENSCJAG00000006864	-	99	44.050	ENSLBEG00000011394	gnl3	99	44.207	Labrus_bergylta
ENSCJAG00000006864	-	99	50.176	ENSLACG00000001259	GNL3	99	51.773	Latimeria_chalumnae
ENSCJAG00000006864	-	87	47.629	ENSLOCG00000010542	gnl3	99	43.357	Lepisosteus_oculatus
ENSCJAG00000006864	-	100	75.725	ENSLAFG00000016056	GNL3	100	75.906	Loxodonta_africana
ENSCJAG00000006864	-	100	90.710	ENSMFAG00000000613	GNL3	100	92.168	Macaca_fascicularis
ENSCJAG00000006864	-	98	90.317	ENSMMUG00000012511	GNL3	100	91.806	Macaca_mulatta
ENSCJAG00000006864	-	98	90.503	ENSMNEG00000041979	GNL3	100	91.993	Macaca_nemestrina
ENSCJAG00000006864	-	100	91.803	ENSMLEG00000027696	GNL3	100	91.803	Mandrillus_leucophaeus
ENSCJAG00000006864	-	99	45.035	ENSMAMG00000008904	gnl3	99	44.991	Mastacembelus_armatus
ENSCJAG00000006864	-	87	45.643	ENSMZEG00005014957	-	97	44.890	Maylandia_zebra
ENSCJAG00000006864	-	87	48.665	ENSMZEG00005014857	gnl3	99	45.179	Maylandia_zebra
ENSCJAG00000006864	-	94	42.215	ENSMGAG00000000848	GNL3	99	41.833	Meleagris_gallopavo
ENSCJAG00000006864	-	100	70.480	ENSMAUG00000020178	Gnl3	100	71.402	Mesocricetus_auratus
ENSCJAG00000006864	-	100	78.300	ENSMICG00000016373	GNL3	100	78.662	Microcebus_murinus
ENSCJAG00000006864	-	100	72.578	ENSMOCG00000018437	Gnl3	100	72.578	Microtus_ochrogaster
ENSCJAG00000006864	-	99	41.772	ENSMMOG00000002815	gnl3	95	45.885	Mola_mola
ENSCJAG00000006864	-	100	57.348	ENSMODG00000011257	GNL3	100	58.727	Monodelphis_domestica
ENSCJAG00000006864	-	95	39.474	ENSMALG00000021043	gnl3	99	43.548	Monopterus_albus
ENSCJAG00000006864	-	100	70.350	MGP_CAROLIEiJ_G0019063	Gnl3	100	70.718	Mus_caroli
ENSCJAG00000006864	-	100	70.902	ENSMUSG00000042354	Gnl3	100	81.757	Mus_musculus
ENSCJAG00000006864	-	100	72.376	MGP_PahariEiJ_G0030080	Gnl3	100	72.376	Mus_pahari
ENSCJAG00000006864	-	100	71.271	MGP_SPRETEiJ_G0019948	Gnl3	100	71.271	Mus_spretus
ENSCJAG00000006864	-	100	78.467	ENSMPUG00000016777	GNL3	100	79.015	Mustela_putorius_furo
ENSCJAG00000006864	-	100	73.237	ENSMLUG00000000728	GNL3	100	73.418	Myotis_lucifugus
ENSCJAG00000006864	-	100	74.047	ENSNGAG00000017202	Gnl3	100	74.410	Nannospalax_galili
ENSCJAG00000006864	-	87	44.770	ENSNBRG00000013161	gnl3	100	42.771	Neolamprologus_brichardi
ENSCJAG00000006864	-	100	91.985	ENSNLEG00000007173	GNL3	100	91.985	Nomascus_leucogenys
ENSCJAG00000006864	-	99	42.222	ENSMEUG00000011502	-	87	50.122	Notamacropus_eugenii
ENSCJAG00000006864	-	79	69.037	ENSOPRG00000009356	GNL3	99	69.037	Ochotona_princeps
ENSCJAG00000006864	-	100	75.092	ENSODEG00000009492	GNL3	100	75.092	Octodon_degus
ENSCJAG00000006864	-	99	45.081	ENSONIG00000019335	gnl3	99	45.179	Oreochromis_niloticus
ENSCJAG00000006864	-	100	55.018	ENSOANG00000013437	GNL3	100	55.197	Ornithorhynchus_anatinus
ENSCJAG00000006864	-	100	74.909	ENSOCUG00000009841	GNL3	100	75.636	Oryctolagus_cuniculus
ENSCJAG00000006864	-	99	45.917	ENSORLG00000016030	gnl3	99	45.601	Oryzias_latipes
ENSCJAG00000006864	-	99	45.586	ENSORLG00020014358	gnl3	99	45.766	Oryzias_latipes_hni
ENSCJAG00000006864	-	99	45.045	ENSORLG00015009489	gnl3	99	44.742	Oryzias_latipes_hsok
ENSCJAG00000006864	-	99	45.766	ENSOMEG00000005462	gnl3	99	45.811	Oryzias_melastigma
ENSCJAG00000006864	-	100	81.408	ENSOGAG00000004101	GNL3	100	81.408	Otolemur_garnettii
ENSCJAG00000006864	-	100	76.715	ENSOARG00000002470	GNL3	100	76.534	Ovis_aries
ENSCJAG00000006864	-	100	92.350	ENSPPAG00000019253	GNL3	100	92.350	Pan_paniscus
ENSCJAG00000006864	-	100	79.091	ENSPPRG00000009550	GNL3	100	79.091	Panthera_pardus
ENSCJAG00000006864	-	100	78.909	ENSPTIG00000009356	GNL3	100	78.909	Panthera_tigris_altaica
ENSCJAG00000006864	-	100	92.350	ENSPTRG00000015009	GNL3	100	92.350	Pan_troglodytes
ENSCJAG00000006864	-	100	86.703	ENSPANG00000016579	GNL3	100	88.160	Papio_anubis
ENSCJAG00000006864	-	87	47.799	ENSPKIG00000024295	gnl3	99	45.487	Paramormyrops_kingsleyae
ENSCJAG00000006864	-	98	52.962	ENSPSIG00000011486	GNL3	100	53.694	Pelodiscus_sinensis
ENSCJAG00000006864	-	99	44.199	ENSPMGG00000008210	gnl3	99	44.567	Periophthalmus_magnuspinnatus
ENSCJAG00000006864	-	100	73.162	ENSPEMG00000017577	Gnl3	100	73.897	Peromyscus_maniculatus_bairdii
ENSCJAG00000006864	-	99	55.495	ENSPCIG00000018642	GNL3	98	56.058	Phascolarctos_cinereus
ENSCJAG00000006864	-	99	44.846	ENSPFOG00000017601	gnl3	99	44.665	Poecilia_formosa
ENSCJAG00000006864	-	99	45.735	ENSPLAG00000016968	gnl3	99	45.735	Poecilia_latipinna
ENSCJAG00000006864	-	99	43.898	ENSPMEG00000018775	gnl3	99	43.169	Poecilia_mexicana
ENSCJAG00000006864	-	99	44.241	ENSPREG00000002909	gnl3	99	43.510	Poecilia_reticulata
ENSCJAG00000006864	-	100	91.652	ENSPPYG00000013800	GNL3	100	91.652	Pongo_abelii
ENSCJAG00000006864	-	82	82.805	ENSPCAG00000002006	GNL3	81	82.805	Procavia_capensis
ENSCJAG00000006864	-	100	82.696	ENSPCOG00000026637	GNL3	100	83.424	Propithecus_coquereli
ENSCJAG00000006864	-	100	78.623	ENSPVAG00000012586	GNL3	100	78.623	Pteropus_vampyrus
ENSCJAG00000006864	-	91	44.910	ENSPNYG00000005130	gnl3	98	44.910	Pundamilia_nyererei
ENSCJAG00000006864	-	100	43.186	ENSPNAG00000013096	gnl3	100	43.486	Pygocentrus_nattereri
ENSCJAG00000006864	-	100	75.000	ENSRNOG00000028461	Gnl3	100	75.000	Rattus_norvegicus
ENSCJAG00000006864	-	100	90.710	ENSRBIG00000031778	GNL3	100	92.168	Rhinopithecus_bieti
ENSCJAG00000006864	-	100	90.710	ENSRROG00000030086	GNL3	100	92.168	Rhinopithecus_roxellana
ENSCJAG00000006864	-	100	95.212	ENSSBOG00000019990	GNL3	100	95.396	Saimiri_boliviensis_boliviensis
ENSCJAG00000006864	-	99	55.109	ENSSHAG00000006141	GNL3	99	55.818	Sarcophilus_harrisii
ENSCJAG00000006864	-	99	46.223	ENSSFOG00015021228	gnl3	99	46.763	Scleropages_formosus
ENSCJAG00000006864	-	99	44.784	ENSSMAG00000006662	gnl3	99	44.784	Scophthalmus_maximus
ENSCJAG00000006864	-	99	45.126	ENSSDUG00000000972	gnl3	99	45.126	Seriola_dumerili
ENSCJAG00000006864	-	99	45.126	ENSSLDG00000008692	gnl3	92	45.126	Seriola_lalandi_dorsalis
ENSCJAG00000006864	-	99	72.376	ENSSARG00000002226	GNL3	100	72.744	Sorex_araneus
ENSCJAG00000006864	-	100	53.641	ENSSPUG00000003582	GNL3	100	53.996	Sphenodon_punctatus
ENSCJAG00000006864	-	99	45.422	ENSSPAG00000020180	gnl3	99	45.422	Stegastes_partitus
ENSCJAG00000006864	-	100	77.495	ENSSSCG00000011449	GNL3	99	77.677	Sus_scrofa
ENSCJAG00000006864	-	99	51.799	ENSTGUG00000005774	GNL3	100	52.878	Taeniopygia_guttata
ENSCJAG00000006864	-	99	45.027	ENSTRUG00000005552	gnl3	99	45.027	Takifugu_rubripes
ENSCJAG00000006864	-	99	44.065	ENSTNIG00000007263	gnl3	99	44.165	Tetraodon_nigroviridis
ENSCJAG00000006864	-	97	74.157	ENSTBEG00000017518	GNL3	100	74.906	Tupaia_belangeri
ENSCJAG00000006864	-	63	71.720	ENSTTRG00000008574	-	100	72.595	Tursiops_truncatus
ENSCJAG00000006864	-	100	79.710	ENSUAMG00000012347	GNL3	100	79.710	Ursus_americanus
ENSCJAG00000006864	-	100	79.891	ENSUMAG00000021001	GNL3	100	79.891	Ursus_maritimus
ENSCJAG00000006864	-	53	88.679	ENSVPAG00000007379	-	53	88.679	Vicugna_pacos
ENSCJAG00000006864	-	99	77.697	ENSVVUG00000024536	-	100	83.333	Vulpes_vulpes
ENSCJAG00000006864	-	81	46.861	ENSXCOG00000018425	gnl3	95	46.861	Xiphophorus_couchianus
ENSCJAG00000006864	-	99	44.828	ENSXMAG00000022565	gnl3	99	44.624	Xiphophorus_maculatus