EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000006888 (Gene tree)
Gene ID: 100568451
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 38653 bases
Position: chrNTIC01011112.1:163980842-164019494
Accession: 100568451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000046590	RRM_5	PF13893.6	6.7e-07	1	2
ENSCJAP00000046590	RRM_5	PF13893.6	6.7e-07	2	2
ENSCJAP00000012899	RRM_5	PF13893.6	8.2e-07	1	2
ENSCJAP00000012899	RRM_5	PF13893.6	8.2e-07	2	2
ENSCJAP00000050706	RRM_5	PF13893.6	8.4e-07	1	2
ENSCJAP00000050706	RRM_5	PF13893.6	8.4e-07	2	2
ENSCJAP00000044742	RRM_5	PF13893.6	2.4e-06	1	1
ENSCJAP00000012914	RRM_5	PF13893.6	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000054997	-	1533	-	ENSCJAP00000046590	510 (aa)	-	F7I1E3
ENSCJAT00000013489	-	867	-	ENSCJAP00000012799	288 (aa)	-	F6QWD8
ENSCJAT00000013611	-	2688	-	ENSCJAP00000012914	895 (aa)	XP_008983235	F6S1Q7
ENSCJAT00000013594	-	1680	-	ENSCJAP00000012899	559 (aa)	XP_008983270	F6T9I8
ENSCJAT00000060419	-	1656	-	ENSCJAP00000050706	551 (aa)	-	F7EWQ2
ENSCJAT00000062914	-	2529	-	ENSCJAP00000044742	842 (aa)	-	F7G8I9

Gene Model

Click here to download ENSCJAG00000006888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000006888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000006888	-	100	98.390	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSCJAG00000006888	-	99	98.214	ENSAMEG00000011347	-	100	98.214	Ailuropoda_melanoleuca
ENSCJAG00000006888	-	100	81.461	ENSAPLG00000008118	-	100	80.219	Anas_platyrhynchos
ENSCJAG00000006888	-	99	72.632	ENSACAG00000016233	-	99	71.916	Anolis_carolinensis
ENSCJAG00000006888	-	100	99.169	ENSANAG00000022951	-	100	99.169	Aotus_nancymaae
ENSCJAG00000006888	-	84	72.826	ENSANAG00000024654	-	99	72.826	Aotus_nancymaae
ENSCJAG00000006888	-	53	57.143	ENSACLG00000015903	matr3l1.1	62	57.143	Astatotilapia_calliptera
ENSCJAG00000006888	-	85	33.663	ENSAMXG00000010685	matr3l1.1	81	40.441	Astyanax_mexicanus
ENSCJAG00000006888	-	100	97.867	ENSBTAG00000006756	MATR3	100	97.867	Bos_taurus
ENSCJAG00000006888	-	99	96.863	ENSCAFG00000001345	MATR3	100	94.314	Canis_familiaris
ENSCJAG00000006888	-	100	97.630	ENSCAFG00020010504	-	100	97.630	Canis_lupus_dingo
ENSCJAG00000006888	-	99	97.451	ENSCHIG00000025746	-	100	92.977	Capra_hircus
ENSCJAG00000006888	-	99	98.228	ENSTSYG00000011028	-	98	97.561	Carlito_syrichta
ENSCJAG00000006888	-	99	97.239	ENSCPOG00000014076	-	99	96.953	Cavia_porcellus
ENSCJAG00000006888	-	57	47.692	ENSCCAG00000028170	ZNF638	74	32.597	Cebus_capucinus
ENSCJAG00000006888	-	100	99.642	ENSCCAG00000025074	-	100	99.642	Cebus_capucinus
ENSCJAG00000006888	-	100	98.569	ENSCATG00000041304	-	100	98.569	Cercocebus_atys
ENSCJAG00000006888	-	54	56.000	ENSCATG00000032207	ZNF638	74	32.222	Cercocebus_atys
ENSCJAG00000006888	-	99	97.436	ENSCLAG00000015998	-	99	93.065	Chinchilla_lanigera
ENSCJAG00000006888	-	99	98.622	ENSCSAG00000013075	-	100	93.855	Chlorocebus_sabaeus
ENSCJAG00000006888	-	100	80.175	ENSCPBG00000006303	-	100	80.066	Chrysemys_picta_bellii
ENSCJAG00000006888	-	100	98.771	ENSCANG00000028224	-	100	98.771	Colobus_angolensis_palliatus
ENSCJAG00000006888	-	99	97.047	ENSCGRG00001020227	Matr3	99	96.357	Cricetulus_griseus_chok1gshd
ENSCJAG00000006888	-	99	97.047	ENSCGRG00000011298	Matr3	100	92.737	Cricetulus_griseus_crigri
ENSCJAG00000006888	-	99	32.143	ENSCSEG00000012682	matr3l1.1	75	46.429	Cynoglossus_semilaevis
ENSCJAG00000006888	-	82	39.000	ENSCVAG00000005337	matr3l1.1	76	38.000	Cyprinodon_variegatus
ENSCJAG00000006888	-	100	97.661	ENSDNOG00000037723	-	100	97.661	Dasypus_novemcinctus
ENSCJAG00000006888	-	99	97.647	ENSEASG00005020857	-	100	93.200	Equus_asinus_asinus
ENSCJAG00000006888	-	99	97.451	ENSECAG00000012882	MATR3	100	93.088	Equus_caballus
ENSCJAG00000006888	-	82	42.718	ENSELUG00000021651	si:ch211-271b14.1	86	42.718	Esox_lucius
ENSCJAG00000006888	-	74	49.123	ENSELUG00000021848	matr3l1.1	75	51.515	Esox_lucius
ENSCJAG00000006888	-	100	97.504	ENSFCAG00000021911	-	100	97.504	Felis_catus
ENSCJAG00000006888	-	100	79.235	ENSFALG00000003071	-	100	79.126	Ficedula_albicollis
ENSCJAG00000006888	-	100	95.349	ENSFDAG00000017675	-	100	95.349	Fukomys_damarensis
ENSCJAG00000006888	-	100	81.051	ENSGALG00000002478	MATR3	100	79.847	Gallus_gallus
ENSCJAG00000006888	-	100	80.066	ENSGAGG00000011386	-	100	79.956	Gopherus_agassizii
ENSCJAG00000006888	-	100	98.694	ENSGGOG00000007308	-	100	98.694	Gorilla_gorilla
ENSCJAG00000006888	-	100	96.959	ENSHGLG00000004673	MATR3	100	96.959	Heterocephalus_glaber_female
ENSCJAG00000006888	-	99	97.835	ENSHGLG00100006442	-	100	97.839	Heterocephalus_glaber_male
ENSCJAG00000006888	-	58	49.057	ENSHCOG00000013223	matr3l1.1	74	50.000	Hippocampus_comes
ENSCJAG00000006888	-	100	97.504	ENSSTOG00000014746	-	100	97.504	Ictidomys_tridecemlineatus
ENSCJAG00000006888	-	99	70.000	ENSJJAG00000011022	-	95	82.353	Jaculus_jaculus
ENSCJAG00000006888	-	100	95.707	ENSJJAG00000021710	-	100	95.707	Jaculus_jaculus
ENSCJAG00000006888	-	63	43.210	ENSLBEG00000018267	matr3l1.1	84	43.210	Labrus_bergylta
ENSCJAG00000006888	-	99	57.296	ENSLACG00000006743	-	99	58.691	Latimeria_chalumnae
ENSCJAG00000006888	-	100	98.883	ENSMFAG00000000634	-	100	98.883	Macaca_fascicularis
ENSCJAG00000006888	-	60	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSCJAG00000006888	-	100	98.883	ENSMMUG00000016741	MATR3	100	98.883	Macaca_mulatta
ENSCJAG00000006888	-	100	98.748	ENSMNEG00000042856	-	100	98.748	Macaca_nemestrina
ENSCJAG00000006888	-	100	98.748	ENSMLEG00000041178	-	100	98.748	Mandrillus_leucophaeus
ENSCJAG00000006888	-	71	48.235	ENSMAMG00000013840	matr3l1.1	78	36.905	Mastacembelus_armatus
ENSCJAG00000006888	-	100	80.942	ENSMGAG00000001331	-	100	79.737	Meleagris_gallopavo
ENSCJAG00000006888	-	99	96.654	ENSMAUG00000011647	Matr3	100	92.626	Mesocricetus_auratus
ENSCJAG00000006888	-	98	97.206	ENSMICG00000012438	-	99	97.211	Microcebus_murinus
ENSCJAG00000006888	-	100	96.064	ENSMOCG00000015711	Matr3	100	96.064	Microtus_ochrogaster
ENSCJAG00000006888	-	99	87.573	ENSMODG00000011925	-	99	85.317	Monodelphis_domestica
ENSCJAG00000006888	-	100	96.601	MGP_CAROLIEiJ_G0022108	Matr3	100	97.053	Mus_caroli
ENSCJAG00000006888	-	99	97.047	ENSMUSG00000037236	Matr3	100	92.737	Mus_musculus
ENSCJAG00000006888	-	100	96.601	MGP_PahariEiJ_G0018842	Matr3	100	97.053	Mus_pahari
ENSCJAG00000006888	-	100	96.064	MGP_SPRETEiJ_G0023020	Matr3	100	96.464	Mus_spretus
ENSCJAG00000006888	-	100	94.760	ENSMPUG00000009297	-	100	94.760	Mustela_putorius_furo
ENSCJAG00000006888	-	99	96.086	ENSMLUG00000005798	-	99	92.094	Myotis_lucifugus
ENSCJAG00000006888	-	100	97.138	ENSNGAG00000017452	Matr3	100	97.138	Nannospalax_galili
ENSCJAG00000006888	-	50	56.000	ENSNLEG00000010274	ZNF638	74	32.044	Nomascus_leucogenys
ENSCJAG00000006888	-	100	98.812	ENSNLEG00000009093	-	100	98.812	Nomascus_leucogenys
ENSCJAG00000006888	-	99	93.468	ENSOPRG00000016511	-	100	93.468	Ochotona_princeps
ENSCJAG00000006888	-	99	97.041	ENSODEG00000003015	-	99	96.774	Octodon_degus
ENSCJAG00000006888	-	99	97.638	ENSOCUG00000026311	MATR3	100	93.184	Oryctolagus_cuniculus
ENSCJAG00000006888	-	51	48.148	ENSORLG00000025674	matr3l1.1	78	38.849	Oryzias_latipes
ENSCJAG00000006888	-	71	37.121	ENSORLG00020009362	matr3l1.1	79	38.686	Oryzias_latipes_hni
ENSCJAG00000006888	-	63	48.148	ENSORLG00015018551	matr3l1.1	80	37.333	Oryzias_latipes_hsok
ENSCJAG00000006888	-	67	39.474	ENSOMEG00000022287	matr3l1.1	80	36.364	Oryzias_melastigma
ENSCJAG00000006888	-	99	98.622	ENSOGAG00000010607	-	100	93.743	Otolemur_garnettii
ENSCJAG00000006888	-	99	97.451	ENSOARG00000016931	-	99	92.977	Ovis_aries
ENSCJAG00000006888	-	100	98.659	ENSPPAG00000001418	-	100	98.659	Pan_paniscus
ENSCJAG00000006888	-	99	92.913	ENSPPAG00000026720	-	100	91.055	Pan_paniscus
ENSCJAG00000006888	-	100	97.683	ENSPPRG00000008004	-	100	97.683	Panthera_pardus
ENSCJAG00000006888	-	99	97.647	ENSPTIG00000010711	-	100	93.023	Panthera_tigris_altaica
ENSCJAG00000006888	-	100	98.659	ENSPTRG00000017294	MATR3	100	98.659	Pan_troglodytes
ENSCJAG00000006888	-	99	98.622	ENSPANG00000032489	-	98	98.711	Papio_anubis
ENSCJAG00000006888	-	100	98.883	ENSPANG00000012018	-	100	98.883	Papio_anubis
ENSCJAG00000006888	-	93	41.379	ENSPKIG00000000333	matr3l1.1	74	41.379	Paramormyrops_kingsleyae
ENSCJAG00000006888	-	100	80.635	ENSPSIG00000014598	-	100	80.525	Pelodiscus_sinensis
ENSCJAG00000006888	-	99	97.047	ENSPEMG00000020679	Matr3	100	92.737	Peromyscus_maniculatus_bairdii
ENSCJAG00000006888	-	100	98.883	ENSPPYG00000015835	-	100	98.883	Pongo_abelii
ENSCJAG00000006888	-	100	98.211	ENSPCOG00000025718	-	100	98.211	Propithecus_coquereli
ENSCJAG00000006888	-	99	98.452	ENSPVAG00000015431	-	100	98.635	Pteropus_vampyrus
ENSCJAG00000006888	-	57	46.512	ENSPNYG00000015855	-	96	39.062	Pundamilia_nyererei
ENSCJAG00000006888	-	99	96.260	ENSRNOG00000019875	Matr3	100	92.291	Rattus_norvegicus
ENSCJAG00000006888	-	100	98.748	ENSRBIG00000034713	-	100	98.748	Rhinopithecus_bieti
ENSCJAG00000006888	-	100	98.748	ENSRROG00000039415	-	100	98.821	Rhinopithecus_roxellana
ENSCJAG00000006888	-	50	56.000	ENSRROG00000045431	ZNF638	74	32.778	Rhinopithecus_roxellana
ENSCJAG00000006888	-	99	97.835	ENSRROG00000043949	-	99	96.223	Rhinopithecus_roxellana
ENSCJAG00000006888	-	51	47.692	ENSSBOG00000029960	ZNF638	74	32.597	Saimiri_boliviensis_boliviensis
ENSCJAG00000006888	-	100	99.463	ENSSBOG00000030159	-	100	99.463	Saimiri_boliviensis_boliviensis
ENSCJAG00000006888	-	99	87.767	ENSSHAG00000010331	-	99	85.428	Sarcophilus_harrisii
ENSCJAG00000006888	-	59	55.556	ENSSDUG00000015369	matr3l1.1	72	51.471	Seriola_dumerili
ENSCJAG00000006888	-	99	79.540	ENSSPUG00000019236	-	99	79.276	Sphenodon_punctatus
ENSCJAG00000006888	-	100	97.504	ENSSSCG00000014343	-	100	97.504	Sus_scrofa
ENSCJAG00000006888	-	99	80.066	ENSTGUG00000014568	MATR3	99	79.299	Taeniopygia_guttata
ENSCJAG00000006888	-	52	37.327	ENSTRUG00000001692	-	74	34.448	Takifugu_rubripes
ENSCJAG00000006888	-	57	57.143	ENSTNIG00000003166	matr3l1.1	71	57.143	Tetraodon_nigroviridis
ENSCJAG00000006888	-	86	96.982	ENSUAMG00000000097	-	99	96.982	Ursus_americanus
ENSCJAG00000006888	-	99	97.255	ENSUMAG00000015808	-	100	94.203	Ursus_maritimus
ENSCJAG00000006888	-	100	97.775	ENSVPAG00000006337	-	100	97.775	Vicugna_pacos
ENSCJAG00000006888	-	100	97.326	ENSVVUG00000020287	-	100	97.326	Vulpes_vulpes
ENSCJAG00000006888	-	100	55.423	ENSXETG00000003838	matr3	100	54.783	Xenopus_tropicalis
ENSCJAG00000006888	-	64	34.343	ENSXMAG00000014107	-	77	34.343	Xiphophorus_maculatus