EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000007062 (Gene tree)
Gene ID: 100401762
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 34290 bases
Position: chrNTIC01036611.1:43236184-43270473
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000013272	KH_1	PF00013.29	2.2e-69	1	4
ENSCJAP00000013272	KH_1	PF00013.29	2.2e-69	2	4
ENSCJAP00000013272	KH_1	PF00013.29	2.2e-69	3	4
ENSCJAP00000013272	KH_1	PF00013.29	2.2e-69	4	4
ENSCJAP00000013209	KH_1	PF00013.29	2.4e-69	1	4
ENSCJAP00000013209	KH_1	PF00013.29	2.4e-69	2	4
ENSCJAP00000013209	KH_1	PF00013.29	2.4e-69	3	4
ENSCJAP00000013209	KH_1	PF00013.29	2.4e-69	4	4
ENSCJAP00000013209	KH_2	PF07650.17	2.6e-22	1	2
ENSCJAP00000013209	KH_2	PF07650.17	2.6e-22	2	2
ENSCJAP00000013272	KH_2	PF07650.17	2.6e-22	1	2
ENSCJAP00000013272	KH_2	PF07650.17	2.6e-22	2	2
ENSCJAP00000013272	DUF1897	PF09005.10	1.4e-11	1	2
ENSCJAP00000013272	DUF1897	PF09005.10	1.4e-11	2	2
ENSCJAP00000013209	DUF1897	PF09005.10	1.5e-11	1	2
ENSCJAP00000013209	DUF1897	PF09005.10	1.5e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000013985	FUBP1-201	3249	-	ENSCJAP00000013272	643 (aa)	-	U3CCE9
ENSCJAT00000013922	FUBP1-202	1968	-	ENSCJAP00000013209	655 (aa)	-	F6ZHP9

Gene Model

Click here to download ENSCJAG00000007062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000007062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000007062	FUBP1	60	35.294	ENSCJAG00000005783	PCBP4	74	33.333
ENSCJAG00000007062	FUBP1	93	55.032	ENSCJAG00000020542	FUBP3	82	65.268
ENSCJAG00000007062	FUBP1	93	60.720	ENSCJAG00000016627	KHSRP	61	68.578
ENSCJAG00000007062	FUBP1	53	31.609	ENSCJAG00000039497	NOVA1	51	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000007062	FUBP1	100	99.689	ENSG00000162613	FUBP1	100	99.689	Homo_sapiens
ENSCJAG00000007062	FUBP1	99	70.878	ENSAPOG00000014845	fubp1	70	76.035	Acanthochromis_polyacanthus
ENSCJAG00000007062	FUBP1	100	96.402	ENSAMEG00000007372	FUBP1	100	96.402	Ailuropoda_melanoleuca
ENSCJAG00000007062	FUBP1	100	69.432	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSCJAG00000007062	FUBP1	100	68.413	ENSAPEG00000012232	fubp1	72	77.243	Amphiprion_percula
ENSCJAG00000007062	FUBP1	99	72.628	ENSATEG00000018619	fubp1	70	78.366	Anabas_testudineus
ENSCJAG00000007062	FUBP1	93	97.508	ENSAPLG00000005965	FUBP1	100	97.508	Anas_platyrhynchos
ENSCJAG00000007062	FUBP1	99	86.237	ENSACAG00000006310	FUBP1	97	86.522	Anolis_carolinensis
ENSCJAG00000007062	FUBP1	99	71.429	ENSACLG00000006708	fubp1	72	78.146	Astatotilapia_calliptera
ENSCJAG00000007062	FUBP1	87	77.612	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSCJAG00000007062	FUBP1	100	99.845	ENSCAFG00000020361	FUBP1	100	99.845	Canis_familiaris
ENSCJAG00000007062	FUBP1	94	99.172	ENSTSYG00000000148	FUBP1	100	99.172	Carlito_syrichta
ENSCJAG00000007062	FUBP1	58	98.168	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSCJAG00000007062	FUBP1	100	98.480	ENSCPOG00000002757	FUBP1	100	98.480	Cavia_porcellus
ENSCJAG00000007062	FUBP1	100	84.682	ENSCCAG00000036537	FUBP1	100	84.971	Cebus_capucinus
ENSCJAG00000007062	FUBP1	100	99.689	ENSCATG00000042126	FUBP1	100	99.689	Cercocebus_atys
ENSCJAG00000007062	FUBP1	100	99.379	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSCJAG00000007062	FUBP1	100	99.689	ENSCSAG00000001402	FUBP1	100	99.689	Chlorocebus_sabaeus
ENSCJAG00000007062	FUBP1	100	99.084	ENSCHOG00000008177	FUBP1	100	99.084	Choloepus_hoffmanni
ENSCJAG00000007062	FUBP1	100	98.145	ENSCGRG00001007103	Fubp1	100	98.145	Cricetulus_griseus_chok1gshd
ENSCJAG00000007062	FUBP1	94	98.847	ENSCGRG00000003372	Fubp1	100	98.847	Cricetulus_griseus_crigri
ENSCJAG00000007062	FUBP1	100	70.706	ENSCSEG00000021412	fubp1	70	76.316	Cynoglossus_semilaevis
ENSCJAG00000007062	FUBP1	99	69.747	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSCJAG00000007062	FUBP1	100	70.091	ENSDARG00000029248	fubp1	70	76.940	Danio_rerio
ENSCJAG00000007062	FUBP1	68	73.077	ENSDNOG00000034565	-	83	74.699	Dasypus_novemcinctus
ENSCJAG00000007062	FUBP1	100	99.237	ENSDORG00000016534	Fubp1	100	99.237	Dipodomys_ordii
ENSCJAG00000007062	FUBP1	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSCJAG00000007062	FUBP1	83	47.826	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSCJAG00000007062	FUBP1	99	97.917	ENSEEUG00000001287	FUBP1	89	97.917	Erinaceus_europaeus
ENSCJAG00000007062	FUBP1	100	68.939	ENSELUG00000007990	fubp1	70	74.675	Esox_lucius
ENSCJAG00000007062	FUBP1	99	96.417	ENSFALG00000005768	FUBP1	98	95.969	Ficedula_albicollis
ENSCJAG00000007062	FUBP1	100	98.931	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSCJAG00000007062	FUBP1	100	71.626	ENSFHEG00000005230	fubp1	70	78.808	Fundulus_heteroclitus
ENSCJAG00000007062	FUBP1	100	66.513	ENSGMOG00000003370	fubp1	70	69.956	Gadus_morhua
ENSCJAG00000007062	FUBP1	100	96.744	ENSGALG00000008939	FUBP1	100	96.744	Gallus_gallus
ENSCJAG00000007062	FUBP1	100	70.287	ENSGAFG00000020972	fubp1	91	77.955	Gambusia_affinis
ENSCJAG00000007062	FUBP1	100	70.336	ENSGACG00000016563	fubp1	70	75.877	Gasterosteus_aculeatus
ENSCJAG00000007062	FUBP1	100	70.326	ENSHBUG00000009835	fubp1	85	76.923	Haplochromis_burtoni
ENSCJAG00000007062	FUBP1	72	91.595	ENSHGLG00000002808	-	72	91.429	Heterocephalus_glaber_female
ENSCJAG00000007062	FUBP1	100	98.764	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSCJAG00000007062	FUBP1	100	98.764	ENSHGLG00100003417	-	100	98.764	Heterocephalus_glaber_male
ENSCJAG00000007062	FUBP1	72	92.457	ENSHGLG00100001414	-	72	92.088	Heterocephalus_glaber_male
ENSCJAG00000007062	FUBP1	100	68.619	ENSHCOG00000000910	fubp1	70	75.107	Hippocampus_comes
ENSCJAG00000007062	FUBP1	100	74.277	ENSIPUG00000009896	fubp1	70	77.851	Ictalurus_punctatus
ENSCJAG00000007062	FUBP1	100	99.845	ENSSTOG00000014312	FUBP1	100	99.845	Ictidomys_tridecemlineatus
ENSCJAG00000007062	FUBP1	100	98.452	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSCJAG00000007062	FUBP1	100	71.121	ENSKMAG00000018897	fubp1	69	77.263	Kryptolebias_marmoratus
ENSCJAG00000007062	FUBP1	100	67.316	ENSLBEG00000012700	fubp1	72	75.159	Labrus_bergylta
ENSCJAG00000007062	FUBP1	98	71.598	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSCJAG00000007062	FUBP1	100	96.006	ENSLAFG00000003273	FUBP1	100	98.198	Loxodonta_africana
ENSCJAG00000007062	FUBP1	100	99.844	ENSMFAG00000031825	FUBP1	100	99.844	Macaca_fascicularis
ENSCJAG00000007062	FUBP1	100	99.689	ENSMMUG00000002899	FUBP1	100	99.689	Macaca_mulatta
ENSCJAG00000007062	FUBP1	100	99.689	ENSMNEG00000045212	FUBP1	100	99.689	Macaca_nemestrina
ENSCJAG00000007062	FUBP1	100	71.538	ENSMZEG00005024298	fubp1	70	78.556	Maylandia_zebra
ENSCJAG00000007062	FUBP1	94	97.025	ENSMGAG00000009424	FUBP1	100	97.025	Meleagris_gallopavo
ENSCJAG00000007062	FUBP1	100	98.632	ENSMAUG00000016428	Fubp1	100	98.632	Mesocricetus_auratus
ENSCJAG00000007062	FUBP1	100	98.480	ENSMOCG00000014751	Fubp1	100	98.658	Microtus_ochrogaster
ENSCJAG00000007062	FUBP1	87	74.000	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSCJAG00000007062	FUBP1	96	91.024	ENSMODG00000020804	FUBP1	100	91.024	Monodelphis_domestica
ENSCJAG00000007062	FUBP1	100	70.923	ENSMALG00000015173	fubp1	70	77.263	Monopterus_albus
ENSCJAG00000007062	FUBP1	100	98.168	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.168	Mus_caroli
ENSCJAG00000007062	FUBP1	100	97.863	ENSMUSG00000028034	Fubp1	100	97.863	Mus_musculus
ENSCJAG00000007062	FUBP1	100	98.626	MGP_PahariEiJ_G0027191	Fubp1	100	99.291	Mus_pahari
ENSCJAG00000007062	FUBP1	100	98.015	MGP_SPRETEiJ_G0026693	Fubp1	100	98.015	Mus_spretus
ENSCJAG00000007062	FUBP1	100	95.224	ENSMLUG00000014802	FUBP1	100	95.224	Myotis_lucifugus
ENSCJAG00000007062	FUBP1	100	94.745	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSCJAG00000007062	FUBP1	100	69.612	ENSNBRG00000015099	fubp1	72	78.146	Neolamprologus_brichardi
ENSCJAG00000007062	FUBP1	100	95.666	ENSNLEG00000009772	FUBP1	100	95.666	Nomascus_leucogenys
ENSCJAG00000007062	FUBP1	90	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSCJAG00000007062	FUBP1	90	99.254	ENSOPRG00000001175	FUBP1	91	97.945	Ochotona_princeps
ENSCJAG00000007062	FUBP1	99	67.239	ENSODEG00000003657	-	99	66.459	Octodon_degus
ENSCJAG00000007062	FUBP1	100	99.084	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSCJAG00000007062	FUBP1	99	70.238	ENSONIG00000018381	fubp1	69	78.556	Oreochromis_niloticus
ENSCJAG00000007062	FUBP1	89	93.234	ENSOANG00000009777	FUBP1	99	93.069	Ornithorhynchus_anatinus
ENSCJAG00000007062	FUBP1	99	69.159	ENSORLG00000003540	fubp1	71	77.925	Oryzias_latipes
ENSCJAG00000007062	FUBP1	100	68.444	ENSORLG00020005908	fubp1	70	77.263	Oryzias_latipes_hni
ENSCJAG00000007062	FUBP1	99	70.872	ENSORLG00015008779	fubp1	70	77.263	Oryzias_latipes_hsok
ENSCJAG00000007062	FUBP1	100	70.497	ENSOMEG00000021943	fubp1	70	76.211	Oryzias_melastigma
ENSCJAG00000007062	FUBP1	100	95.827	ENSOGAG00000014233	FUBP1	100	95.827	Otolemur_garnettii
ENSCJAG00000007062	FUBP1	100	96.833	ENSOARG00000013259	FUBP1	100	96.682	Ovis_aries
ENSCJAG00000007062	FUBP1	100	99.845	ENSPPRG00000000413	FUBP1	100	99.845	Panthera_pardus
ENSCJAG00000007062	FUBP1	100	99.845	ENSPTIG00000019450	FUBP1	100	99.845	Panthera_tigris_altaica
ENSCJAG00000007062	FUBP1	95	96.236	ENSPSIG00000012965	FUBP1	100	96.959	Pelodiscus_sinensis
ENSCJAG00000007062	FUBP1	99	71.561	ENSPMGG00000009060	fubp1	71	76.906	Periophthalmus_magnuspinnatus
ENSCJAG00000007062	FUBP1	100	97.720	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSCJAG00000007062	FUBP1	58	61.966	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSCJAG00000007062	FUBP1	100	68.421	ENSPLAG00000021170	fubp1	72	78.808	Poecilia_latipinna
ENSCJAG00000007062	FUBP1	99	72.671	ENSPMEG00000004747	fubp1	73	78.808	Poecilia_mexicana
ENSCJAG00000007062	FUBP1	99	71.692	ENSPREG00000017911	fubp1	70	78.808	Poecilia_reticulata
ENSCJAG00000007062	FUBP1	72	99.783	ENSPPYG00000001219	-	70	99.783	Pongo_abelii
ENSCJAG00000007062	FUBP1	100	98.779	ENSPCAG00000012617	FUBP1	100	98.779	Procavia_capensis
ENSCJAG00000007062	FUBP1	100	99.845	ENSPCOG00000024974	FUBP1	100	99.845	Propithecus_coquereli
ENSCJAG00000007062	FUBP1	100	95.267	ENSPVAG00000014637	FUBP1	100	95.267	Pteropus_vampyrus
ENSCJAG00000007062	FUBP1	100	71.516	ENSPNYG00000004552	fubp1	73	78.414	Pundamilia_nyererei
ENSCJAG00000007062	FUBP1	100	72.700	ENSPNAG00000016207	fubp1	87	77.223	Pygocentrus_nattereri
ENSCJAG00000007062	FUBP1	100	98.452	ENSRNOG00000043370	Fubp1	100	98.452	Rattus_norvegicus
ENSCJAG00000007062	FUBP1	100	99.689	ENSRBIG00000042950	FUBP1	100	99.689	Rhinopithecus_bieti
ENSCJAG00000007062	FUBP1	100	99.689	ENSRROG00000043534	FUBP1	100	99.689	Rhinopithecus_roxellana
ENSCJAG00000007062	FUBP1	100	99.845	ENSSBOG00000027299	FUBP1	100	99.845	Saimiri_boliviensis_boliviensis
ENSCJAG00000007062	FUBP1	94	97.858	ENSSHAG00000005367	FUBP1	100	98.732	Sarcophilus_harrisii
ENSCJAG00000007062	FUBP1	100	72.985	ENSSFOG00015010213	fubp1	70	79.341	Scleropages_formosus
ENSCJAG00000007062	FUBP1	99	70.152	ENSSDUG00000007383	fubp1	68	76.724	Seriola_dumerili
ENSCJAG00000007062	FUBP1	100	70.242	ENSSLDG00000022863	fubp1	72	76.754	Seriola_lalandi_dorsalis
ENSCJAG00000007062	FUBP1	100	97.491	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSCJAG00000007062	FUBP1	99	88.654	ENSSPUG00000008389	FUBP1	100	86.111	Sphenodon_punctatus
ENSCJAG00000007062	FUBP1	99	72.403	ENSSPAG00000010161	fubp1	69	77.925	Stegastes_partitus
ENSCJAG00000007062	FUBP1	93	96.382	ENSTGUG00000006841	FUBP1	100	96.382	Taeniopygia_guttata
ENSCJAG00000007062	FUBP1	93	72.575	ENSTRUG00000004615	fubp1	65	78.146	Takifugu_rubripes
ENSCJAG00000007062	FUBP1	50	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSCJAG00000007062	FUBP1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSCJAG00000007062	FUBP1	100	99.542	ENSTTRG00000000096	FUBP1	100	99.542	Tursiops_truncatus
ENSCJAG00000007062	FUBP1	99	99.689	ENSVPAG00000004709	FUBP1	100	99.538	Vicugna_pacos
ENSCJAG00000007062	FUBP1	100	69.040	ENSXCOG00000019354	fubp1	72	77.263	Xiphophorus_couchianus
ENSCJAG00000007062	FUBP1	97	72.089	ENSXMAG00000007168	fubp1	73	78.587	Xiphophorus_maculatus