EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000007365 (Gene tree)
Gene ID: 100399700
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 59425 bases
Position: chrNTIC01000002.1:71758568-71817992
Accession: 100399700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000047706	R3H	PF01424.22	3.6e-10	1	1
ENSCJAP00000013805	R3H	PF01424.22	3.7e-10	1	1
ENSCJAP00000013809	R3H	PF01424.22	3.7e-10	1	1
ENSCJAP00000047351	R3H	PF01424.22	3.8e-10	1	1
ENSCJAP00000013777	R3H	PF01424.22	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000014514	R3HDM2-202	2973	-	ENSCJAP00000013777	990 (aa)	-	F6VXL9
ENSCJAT00000053266	R3HDM2-203	2967	-	ENSCJAP00000047351	988 (aa)	XP_009002330	F7HX02
ENSCJAT00000014547	R3HDM2-201	3027	-	ENSCJAP00000013809	1008 (aa)	XP_009002327	F7CAV7
ENSCJAT00000052467	R3HDM2-205	2886	-	ENSCJAP00000047706	961 (aa)	-	F7FM04
ENSCJAT00000014543	R3HDM2-204	2895	-	ENSCJAP00000013805	964 (aa)	XP_009002333	F7CAY3

Gene Model

Click here to download ENSCJAG00000007365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000007365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000007365	R3HDM2	61	50.513	ENSCJAG00000012301	ARPP21	93	44.444
ENSCJAG00000007365	R3HDM2	95	57.178	ENSCJAG00000011718	R3HDM1	99	49.602

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000007365	R3HDM2	100	98.911	ENSG00000179912	R3HDM2	100	98.957	Homo_sapiens
ENSCJAG00000007365	R3HDM2	99	65.927	ENSAPOG00000020341	r3hdm2	99	66.149	Acanthochromis_polyacanthus
ENSCJAG00000007365	R3HDM2	56	36.033	ENSAPOG00000021873	-	79	34.251	Acanthochromis_polyacanthus
ENSCJAG00000007365	R3HDM2	100	93.403	ENSAMEG00000004812	R3HDM2	100	93.403	Ailuropoda_melanoleuca
ENSCJAG00000007365	R3HDM2	92	68.381	ENSACIG00000016146	r3hdm2	98	67.756	Amphilophus_citrinellus
ENSCJAG00000007365	R3HDM2	99	64.516	ENSAOCG00000023694	r3hdm2	99	64.862	Amphiprion_ocellaris
ENSCJAG00000007365	R3HDM2	62	35.474	ENSAOCG00000003840	-	79	37.347	Amphiprion_ocellaris
ENSCJAG00000007365	R3HDM2	61	36.103	ENSAPEG00000014325	-	78	35.490	Amphiprion_percula
ENSCJAG00000007365	R3HDM2	99	65.830	ENSAPEG00000008851	r3hdm2	100	67.819	Amphiprion_percula
ENSCJAG00000007365	R3HDM2	99	64.265	ENSATEG00000025024	r3hdm2	100	68.868	Anabas_testudineus
ENSCJAG00000007365	R3HDM2	100	68.640	ENSAPLG00000004298	R3HDM2	54	76.258	Anas_platyrhynchos
ENSCJAG00000007365	R3HDM2	100	81.827	ENSACAG00000006388	R3HDM2	100	81.925	Anolis_carolinensis
ENSCJAG00000007365	R3HDM2	98	94.731	ENSANAG00000031310	-	100	94.731	Aotus_nancymaae
ENSCJAG00000007365	R3HDM2	100	99.306	ENSANAG00000025397	-	100	99.306	Aotus_nancymaae
ENSCJAG00000007365	R3HDM2	99	63.897	ENSACLG00000019106	r3hdm2	99	64.605	Astatotilapia_calliptera
ENSCJAG00000007365	R3HDM2	93	61.622	ENSAMXG00000017180	r3hdm2	99	62.270	Astyanax_mexicanus
ENSCJAG00000007365	R3HDM2	100	97.068	ENSBTAG00000018361	R3HDM2	100	97.068	Bos_taurus
ENSCJAG00000007365	R3HDM2	100	96.637	ENSCAFG00000000215	R3HDM2	100	96.637	Canis_familiaris
ENSCJAG00000007365	R3HDM2	100	96.367	ENSCAFG00020023713	R3HDM2	100	96.367	Canis_lupus_dingo
ENSCJAG00000007365	R3HDM2	100	96.866	ENSCHIG00000014022	R3HDM2	100	96.866	Capra_hircus
ENSCJAG00000007365	R3HDM2	100	96.583	ENSTSYG00000001449	R3HDM2	100	96.583	Carlito_syrichta
ENSCJAG00000007365	R3HDM2	100	94.332	ENSCPOG00000009217	R3HDM2	100	94.332	Cavia_porcellus
ENSCJAG00000007365	R3HDM2	89	99.330	ENSCCAG00000026083	R3HDM2	100	99.314	Cebus_capucinus
ENSCJAG00000007365	R3HDM2	100	98.911	ENSCATG00000036929	R3HDM2	100	98.911	Cercocebus_atys
ENSCJAG00000007365	R3HDM2	100	95.065	ENSCLAG00000011997	R3HDM2	100	95.065	Chinchilla_lanigera
ENSCJAG00000007365	R3HDM2	100	95.331	ENSCSAG00000004911	R3HDM2	100	95.331	Chlorocebus_sabaeus
ENSCJAG00000007365	R3HDM2	75	92.123	ENSCHOG00000005636	R3HDM2	91	92.123	Choloepus_hoffmanni
ENSCJAG00000007365	R3HDM2	100	80.154	ENSCPBG00000013922	R3HDM2	100	80.462	Chrysemys_picta_bellii
ENSCJAG00000007365	R3HDM2	100	99.089	ENSCANG00000043807	R3HDM2	100	99.089	Colobus_angolensis_palliatus
ENSCJAG00000007365	R3HDM2	100	94.159	ENSCGRG00001017324	R3hdm2	100	94.159	Cricetulus_griseus_chok1gshd
ENSCJAG00000007365	R3HDM2	100	91.591	ENSCGRG00000003862	R3hdm2	100	91.591	Cricetulus_griseus_crigri
ENSCJAG00000007365	R3HDM2	96	65.909	ENSCSEG00000010925	r3hdm2	100	67.925	Cynoglossus_semilaevis
ENSCJAG00000007365	R3HDM2	99	63.083	ENSCVAG00000009058	r3hdm2	100	66.520	Cyprinodon_variegatus
ENSCJAG00000007365	R3HDM2	93	64.339	ENSDARG00000102610	r3hdm2	99	65.602	Danio_rerio
ENSCJAG00000007365	R3HDM2	100	92.546	ENSDNOG00000015033	R3HDM2	100	95.829	Dasypus_novemcinctus
ENSCJAG00000007365	R3HDM2	95	94.080	ENSDORG00000011462	R3hdm2	99	94.080	Dipodomys_ordii
ENSCJAG00000007365	R3HDM2	100	96.472	ENSEASG00005007091	R3HDM2	100	96.472	Equus_asinus_asinus
ENSCJAG00000007365	R3HDM2	100	97.065	ENSECAG00000003157	R3HDM2	100	97.065	Equus_caballus
ENSCJAG00000007365	R3HDM2	95	63.840	ENSELUG00000015969	r3hdm2	100	64.236	Esox_lucius
ENSCJAG00000007365	R3HDM2	100	96.637	ENSFCAG00000000192	R3HDM2	100	96.381	Felis_catus
ENSCJAG00000007365	R3HDM2	86	81.250	ENSFALG00000000255	R3HDM2	100	72.606	Ficedula_albicollis
ENSCJAG00000007365	R3HDM2	100	93.793	ENSFDAG00000019385	R3HDM2	100	94.778	Fukomys_damarensis
ENSCJAG00000007365	R3HDM2	99	62.882	ENSFHEG00000016484	r3hdm2	99	64.479	Fundulus_heteroclitus
ENSCJAG00000007365	R3HDM2	61	33.638	ENSFHEG00000007936	-	85	34.477	Fundulus_heteroclitus
ENSCJAG00000007365	R3HDM2	95	62.905	ENSGMOG00000007961	r3hdm2	100	61.341	Gadus_morhua
ENSCJAG00000007365	R3HDM2	100	79.636	ENSGALG00000043736	R3HDM2	100	77.186	Gallus_gallus
ENSCJAG00000007365	R3HDM2	60	35.123	ENSGAFG00000015558	-	91	32.993	Gambusia_affinis
ENSCJAG00000007365	R3HDM2	99	63.431	ENSGAFG00000013887	r3hdm2	100	66.418	Gambusia_affinis
ENSCJAG00000007365	R3HDM2	95	65.554	ENSGACG00000006442	r3hdm2	100	66.207	Gasterosteus_aculeatus
ENSCJAG00000007365	R3HDM2	100	80.667	ENSGAGG00000017797	R3HDM2	100	80.864	Gopherus_agassizii
ENSCJAG00000007365	R3HDM2	100	98.713	ENSGGOG00000015007	R3HDM2	100	98.713	Gorilla_gorilla
ENSCJAG00000007365	R3HDM2	50	35.325	ENSHBUG00000018525	-	77	35.201	Haplochromis_burtoni
ENSCJAG00000007365	R3HDM2	100	94.862	ENSHGLG00000010434	-	100	94.862	Heterocephalus_glaber_female
ENSCJAG00000007365	R3HDM2	88	87.671	ENSHGLG00000010421	-	97	87.671	Heterocephalus_glaber_female
ENSCJAG00000007365	R3HDM2	100	94.763	ENSHGLG00100004183	-	100	94.763	Heterocephalus_glaber_male
ENSCJAG00000007365	R3HDM2	96	83.543	ENSHGLG00100018871	-	99	83.543	Heterocephalus_glaber_male
ENSCJAG00000007365	R3HDM2	99	63.941	ENSHCOG00000001142	r3hdm2	96	65.144	Hippocampus_comes
ENSCJAG00000007365	R3HDM2	98	73.966	ENSIPUG00000023873	r3hdm2	99	61.789	Ictalurus_punctatus
ENSCJAG00000007365	R3HDM2	100	91.446	ENSSTOG00000013424	R3HDM2	100	92.974	Ictidomys_tridecemlineatus
ENSCJAG00000007365	R3HDM2	100	95.743	ENSJJAG00000010001	R3hdm2	100	95.842	Jaculus_jaculus
ENSCJAG00000007365	R3HDM2	93	69.093	ENSKMAG00000012695	r3hdm2	99	68.321	Kryptolebias_marmoratus
ENSCJAG00000007365	R3HDM2	66	31.507	ENSKMAG00000004052	-	93	31.564	Kryptolebias_marmoratus
ENSCJAG00000007365	R3HDM2	99	64.354	ENSLBEG00000013115	r3hdm2	96	64.034	Labrus_bergylta
ENSCJAG00000007365	R3HDM2	95	69.859	ENSLACG00000019064	r3hdm2	100	69.960	Latimeria_chalumnae
ENSCJAG00000007365	R3HDM2	100	70.796	ENSLOCG00000005976	r3hdm2	100	71.009	Lepisosteus_oculatus
ENSCJAG00000007365	R3HDM2	100	91.954	ENSLAFG00000006510	R3HDM2	100	91.954	Loxodonta_africana
ENSCJAG00000007365	R3HDM2	100	98.890	ENSMFAG00000036385	R3HDM2	100	98.890	Macaca_fascicularis
ENSCJAG00000007365	R3HDM2	100	98.890	ENSMMUG00000021789	R3HDM2	100	98.890	Macaca_mulatta
ENSCJAG00000007365	R3HDM2	100	98.814	ENSMNEG00000025314	R3HDM2	100	98.814	Macaca_nemestrina
ENSCJAG00000007365	R3HDM2	100	99.010	ENSMLEG00000028915	R3HDM2	100	99.010	Mandrillus_leucophaeus
ENSCJAG00000007365	R3HDM2	99	63.516	ENSMAMG00000009793	r3hdm2	99	63.267	Mastacembelus_armatus
ENSCJAG00000007365	R3HDM2	56	35.762	ENSMAMG00000011755	-	86	33.794	Mastacembelus_armatus
ENSCJAG00000007365	R3HDM2	99	63.897	ENSMZEG00005007319	r3hdm2	99	64.605	Maylandia_zebra
ENSCJAG00000007365	R3HDM2	100	97.286	ENSMICG00000012389	R3HDM2	100	97.286	Microcebus_murinus
ENSCJAG00000007365	R3HDM2	100	94.263	ENSMOCG00000014425	R3hdm2	100	94.263	Microtus_ochrogaster
ENSCJAG00000007365	R3HDM2	95	66.421	ENSMMOG00000007448	r3hdm2	99	66.524	Mola_mola
ENSCJAG00000007365	R3HDM2	85	77.532	ENSMALG00000010211	r3hdm2	99	65.213	Monopterus_albus
ENSCJAG00000007365	R3HDM2	100	94.867	MGP_CAROLIEiJ_G0015896	R3hdm2	100	94.867	Mus_caroli
ENSCJAG00000007365	R3HDM2	100	95.158	ENSMUSG00000025404	R3hdm2	100	95.158	Mus_musculus
ENSCJAG00000007365	R3HDM2	100	94.450	MGP_PahariEiJ_G0031189	R3hdm2	100	95.441	Mus_pahari
ENSCJAG00000007365	R3HDM2	100	94.773	MGP_SPRETEiJ_G0016722	R3hdm2	100	94.773	Mus_spretus
ENSCJAG00000007365	R3HDM2	98	91.139	ENSMPUG00000001818	R3HDM2	97	92.113	Mustela_putorius_furo
ENSCJAG00000007365	R3HDM2	100	93.186	ENSMLUG00000004980	R3HDM2	100	93.186	Myotis_lucifugus
ENSCJAG00000007365	R3HDM2	100	96.627	ENSNGAG00000018800	R3hdm2	100	96.627	Nannospalax_galili
ENSCJAG00000007365	R3HDM2	93	67.679	ENSNBRG00000004483	r3hdm2	99	68.177	Neolamprologus_brichardi
ENSCJAG00000007365	R3HDM2	100	99.009	ENSNLEG00000017351	R3HDM2	100	99.009	Nomascus_leucogenys
ENSCJAG00000007365	R3HDM2	99	80.422	ENSMEUG00000008588	R3HDM2	100	80.230	Notamacropus_eugenii
ENSCJAG00000007365	R3HDM2	100	88.595	ENSOPRG00000013670	R3HDM2	100	88.595	Ochotona_princeps
ENSCJAG00000007365	R3HDM2	99	67.062	ENSONIG00000005075	r3hdm2	99	67.224	Oreochromis_niloticus
ENSCJAG00000007365	R3HDM2	100	92.939	ENSOCUG00000013258	R3HDM2	100	92.939	Oryctolagus_cuniculus
ENSCJAG00000007365	R3HDM2	99	64.237	ENSORLG00000005502	r3hdm2	99	62.628	Oryzias_latipes
ENSCJAG00000007365	R3HDM2	99	63.062	ENSORLG00020017069	r3hdm2	99	63.590	Oryzias_latipes_hni
ENSCJAG00000007365	R3HDM2	99	63.158	ENSORLG00015012735	r3hdm2	99	63.654	Oryzias_latipes_hsok
ENSCJAG00000007365	R3HDM2	99	61.345	ENSOMEG00000018079	r3hdm2	99	61.986	Oryzias_melastigma
ENSCJAG00000007365	R3HDM2	100	96.937	ENSOGAG00000012055	R3HDM2	100	96.937	Otolemur_garnettii
ENSCJAG00000007365	R3HDM2	96	83.631	ENSOGAG00000027966	-	99	83.263	Otolemur_garnettii
ENSCJAG00000007365	R3HDM2	100	96.670	ENSOARG00000006929	R3HDM2	100	96.670	Ovis_aries
ENSCJAG00000007365	R3HDM2	100	98.911	ENSPPAG00000034395	R3HDM2	100	98.911	Pan_paniscus
ENSCJAG00000007365	R3HDM2	100	96.670	ENSPPRG00000009240	R3HDM2	100	96.670	Panthera_pardus
ENSCJAG00000007365	R3HDM2	100	96.670	ENSPTIG00000008752	R3HDM2	100	96.670	Panthera_tigris_altaica
ENSCJAG00000007365	R3HDM2	100	98.789	ENSPTRG00000046457	R3HDM2	100	98.789	Pan_troglodytes
ENSCJAG00000007365	R3HDM2	98	97.782	ENSPANG00000024002	R3HDM2	100	97.782	Papio_anubis
ENSCJAG00000007365	R3HDM2	95	66.967	ENSPKIG00000003171	r3hdm2	99	65.414	Paramormyrops_kingsleyae
ENSCJAG00000007365	R3HDM2	63	73.113	ENSPSIG00000006954	R3HDM2	100	72.926	Pelodiscus_sinensis
ENSCJAG00000007365	R3HDM2	93	69.872	ENSPMGG00000007061	r3hdm2	99	69.272	Periophthalmus_magnuspinnatus
ENSCJAG00000007365	R3HDM2	100	93.939	ENSPEMG00000015964	R3hdm2	100	93.939	Peromyscus_maniculatus_bairdii
ENSCJAG00000007365	R3HDM2	100	90.937	ENSPCIG00000023841	R3HDM2	100	90.332	Phascolarctos_cinereus
ENSCJAG00000007365	R3HDM2	94	72.895	ENSPFOG00000006077	r3hdm2	98	73.421	Poecilia_formosa
ENSCJAG00000007365	R3HDM2	99	64.723	ENSPLAG00000002971	r3hdm2	99	66.277	Poecilia_latipinna
ENSCJAG00000007365	R3HDM2	61	32.424	ENSPMEG00000014457	-	72	36.495	Poecilia_mexicana
ENSCJAG00000007365	R3HDM2	99	64.723	ENSPMEG00000005330	r3hdm2	99	66.277	Poecilia_mexicana
ENSCJAG00000007365	R3HDM2	99	64.723	ENSPREG00000008424	r3hdm2	100	64.787	Poecilia_reticulata
ENSCJAG00000007365	R3HDM2	98	92.531	ENSPPYG00000004685	R3HDM2	81	92.252	Pongo_abelii
ENSCJAG00000007365	R3HDM2	88	93.750	ENSPCAG00000014642	R3HDM2	91	95.455	Procavia_capensis
ENSCJAG00000007365	R3HDM2	100	97.477	ENSPCOG00000013201	R3HDM2	100	97.477	Propithecus_coquereli
ENSCJAG00000007365	R3HDM2	100	93.846	ENSPVAG00000003967	R3HDM2	100	93.846	Pteropus_vampyrus
ENSCJAG00000007365	R3HDM2	94	65.831	ENSPNYG00000013479	r3hdm2	100	66.044	Pundamilia_nyererei
ENSCJAG00000007365	R3HDM2	98	66.055	ENSPNAG00000017473	r3hdm2	99	62.773	Pygocentrus_nattereri
ENSCJAG00000007365	R3HDM2	100	93.756	ENSRNOG00000007801	R3hdm2	100	93.756	Rattus_norvegicus
ENSCJAG00000007365	R3HDM2	100	96.333	ENSRBIG00000037403	R3HDM2	100	96.333	Rhinopithecus_bieti
ENSCJAG00000007365	R3HDM2	100	99.009	ENSRROG00000022271	R3HDM2	100	99.009	Rhinopithecus_roxellana
ENSCJAG00000007365	R3HDM2	100	99.504	ENSSBOG00000023547	R3HDM2	100	99.504	Saimiri_boliviensis_boliviensis
ENSCJAG00000007365	R3HDM2	100	84.814	ENSSHAG00000003511	R3HDM2	99	91.572	Sarcophilus_harrisii
ENSCJAG00000007365	R3HDM2	94	70.551	ENSSFOG00015011219	r3hdm2	99	68.998	Scleropages_formosus
ENSCJAG00000007365	R3HDM2	99	64.140	ENSSMAG00000012073	r3hdm2	100	68.147	Scophthalmus_maximus
ENSCJAG00000007365	R3HDM2	99	65.861	ENSSDUG00000019269	r3hdm2	100	67.711	Seriola_dumerili
ENSCJAG00000007365	R3HDM2	99	64.667	ENSSLDG00000005252	r3hdm2	100	68.182	Seriola_lalandi_dorsalis
ENSCJAG00000007365	R3HDM2	93	90.037	ENSSARG00000003958	R3HDM2	94	90.037	Sorex_araneus
ENSCJAG00000007365	R3HDM2	100	78.947	ENSSPUG00000014132	R3HDM2	100	78.752	Sphenodon_punctatus
ENSCJAG00000007365	R3HDM2	99	65.990	ENSSPAG00000022594	r3hdm2	100	69.747	Stegastes_partitus
ENSCJAG00000007365	R3HDM2	63	34.661	ENSSPAG00000016856	-	80	35.605	Stegastes_partitus
ENSCJAG00000007365	R3HDM2	100	97.470	ENSSSCG00000026498	R3HDM2	100	97.470	Sus_scrofa
ENSCJAG00000007365	R3HDM2	72	76.172	ENSTGUG00000015881	R3HDM2	100	76.010	Taeniopygia_guttata
ENSCJAG00000007365	R3HDM2	94	66.172	ENSTRUG00000015075	r3hdm2	99	66.986	Takifugu_rubripes
ENSCJAG00000007365	R3HDM2	91	76.667	ENSTNIG00000007057	r3hdm2	88	77.222	Tetraodon_nigroviridis
ENSCJAG00000007365	R3HDM2	81	96.774	ENSTBEG00000015967	R3HDM2	81	96.774	Tupaia_belangeri
ENSCJAG00000007365	R3HDM2	96	90.086	ENSTTRG00000013082	R3HDM2	93	89.009	Tursiops_truncatus
ENSCJAG00000007365	R3HDM2	100	96.670	ENSUAMG00000020913	R3HDM2	100	93.463	Ursus_americanus
ENSCJAG00000007365	R3HDM2	100	91.239	ENSUMAG00000019179	R3HDM2	100	92.649	Ursus_maritimus
ENSCJAG00000007365	R3HDM2	100	87.428	ENSVPAG00000008656	R3HDM2	100	87.428	Vicugna_pacos
ENSCJAG00000007365	R3HDM2	98	93.359	ENSVVUG00000018014	R3HDM2	97	93.359	Vulpes_vulpes
ENSCJAG00000007365	R3HDM2	100	74.145	ENSXETG00000017153	r3hdm2	100	73.394	Xenopus_tropicalis
ENSCJAG00000007365	R3HDM2	85	65.814	ENSXCOG00000013882	r3hdm2	100	66.127	Xiphophorus_couchianus
ENSCJAG00000007365	R3HDM2	60	34.545	ENSXMAG00000002994	-	91	32.847	Xiphophorus_maculatus
ENSCJAG00000007365	R3HDM2	99	63.429	ENSXMAG00000017978	r3hdm2	100	66.127	Xiphophorus_maculatus