EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000007514 (Gene tree)
Gene ID: 100413728
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 31841 bases
Position: chrNTIC01005557.1:1426959-1458799
Accession: 100413728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000014168	ResIII	PF04851.15	1e-25	1	2
ENSCJAP00000014168	ResIII	PF04851.15	1e-25	2	2
ENSCJAP00000063344	ResIII	PF04851.15	1.6e-10	1	1
ENSCJAP00000014168	DEAD	PF00270.29	6.4e-52	1	2
ENSCJAP00000014168	DEAD	PF00270.29	6.4e-52	2	2
ENSCJAP00000063344	DEAD	PF00270.29	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000014932	SNRNP200-201	6411	XM_002757379	ENSCJAP00000014168	2136 (aa)	XP_002757425	F7IBV6
ENSCJAT00000075153	SNRNP200-202	2073	-	ENSCJAP00000063344	690 (aa)	-	A0A2R8NAJ9

Gene Model

Click here to download ENSCJAG00000007514's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000007514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000007514	SNRNP200	75	31.824	ENSCJAG00000001843	HFM1	58	31.824
ENSCJAG00000007514	SNRNP200	86	44.521	ENSCJAG00000001507	ASCC3	83	44.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000007514	SNRNP200	100	99.953	ENSG00000144028	SNRNP200	100	99.953	Homo_sapiens
ENSCJAG00000007514	SNRNP200	99	90.888	ENSAPOG00000010223	snrnp200	99	90.777	Acanthochromis_polyacanthus
ENSCJAG00000007514	SNRNP200	100	99.813	ENSAMEG00000008996	SNRNP200	100	99.813	Ailuropoda_melanoleuca
ENSCJAG00000007514	SNRNP200	97	90.203	ENSACIG00000001764	snrnp200	98	90.203	Amphilophus_citrinellus
ENSCJAG00000007514	SNRNP200	99	90.747	ENSAOCG00000024593	snrnp200	100	89.989	Amphiprion_ocellaris
ENSCJAG00000007514	SNRNP200	97	90.043	ENSAPEG00000012554	snrnp200	100	90.043	Amphiprion_percula
ENSCJAG00000007514	SNRNP200	99	90.606	ENSATEG00000022522	snrnp200	99	90.496	Anabas_testudineus
ENSCJAG00000007514	SNRNP200	99	97.690	ENSAPLG00000004313	SNRNP200	100	97.690	Anas_platyrhynchos
ENSCJAG00000007514	SNRNP200	99	97.497	ENSACAG00000000434	SNRNP200	100	97.497	Anolis_carolinensis
ENSCJAG00000007514	SNRNP200	100	95.476	ENSANAG00000036625	SNRNP200	100	95.896	Aotus_nancymaae
ENSCJAG00000007514	SNRNP200	99	90.465	ENSACLG00000011188	snrnp200	99	90.356	Astatotilapia_calliptera
ENSCJAG00000007514	SNRNP200	99	90.606	ENSAMXG00000005684	snrnp200	99	90.496	Astyanax_mexicanus
ENSCJAG00000007514	SNRNP200	100	99.251	ENSBTAG00000000848	SNRNP200	100	99.251	Bos_taurus
ENSCJAG00000007514	SNRNP200	100	100.000	ENSCAFG00020019979	SNRNP200	100	100.000	Canis_lupus_dingo
ENSCJAG00000007514	SNRNP200	100	99.438	ENSCHIG00000020611	SNRNP200	100	99.438	Capra_hircus
ENSCJAG00000007514	SNRNP200	100	100.000	ENSTSYG00000010467	SNRNP200	100	100.000	Carlito_syrichta
ENSCJAG00000007514	SNRNP200	99	99.389	ENSCAPG00000017234	SNRNP200	99	99.389	Cavia_aperea
ENSCJAG00000007514	SNRNP200	100	99.672	ENSCPOG00000006776	SNRNP200	100	99.672	Cavia_porcellus
ENSCJAG00000007514	SNRNP200	100	100.000	ENSCCAG00000033962	SNRNP200	100	100.000	Cebus_capucinus
ENSCJAG00000007514	SNRNP200	100	100.000	ENSCATG00000015790	SNRNP200	100	100.000	Cercocebus_atys
ENSCJAG00000007514	SNRNP200	100	99.532	ENSCLAG00000004116	SNRNP200	100	99.532	Chinchilla_lanigera
ENSCJAG00000007514	SNRNP200	100	99.906	ENSCSAG00000017369	SNRNP200	100	99.906	Chlorocebus_sabaeus
ENSCJAG00000007514	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSCJAG00000007514	SNRNP200	100	97.756	ENSCPBG00000022571	SNRNP200	100	97.756	Chrysemys_picta_bellii
ENSCJAG00000007514	SNRNP200	99	76.600	ENSCING00000005082	-	99	76.740	Ciona_intestinalis
ENSCJAG00000007514	SNRNP200	100	94.442	ENSCANG00000033932	SNRNP200	100	99.900	Colobus_angolensis_palliatus
ENSCJAG00000007514	SNRNP200	100	99.719	ENSCGRG00001022610	Snrnp200	100	99.719	Cricetulus_griseus_chok1gshd
ENSCJAG00000007514	SNRNP200	100	99.158	ENSCGRG00000016472	Snrnp200	100	99.158	Cricetulus_griseus_crigri
ENSCJAG00000007514	SNRNP200	100	89.888	ENSCSEG00000016399	snrnp200	100	89.888	Cynoglossus_semilaevis
ENSCJAG00000007514	SNRNP200	100	85.627	ENSCVAG00000017631	snrnp200	99	85.627	Cyprinodon_variegatus
ENSCJAG00000007514	SNRNP200	100	90.356	ENSDARG00000077536	snrnp200	99	90.356	Danio_rerio
ENSCJAG00000007514	SNRNP200	100	98.784	ENSDNOG00000011227	SNRNP200	100	98.315	Dasypus_novemcinctus
ENSCJAG00000007514	SNRNP200	100	97.101	ENSDORG00000005861	Snrnp200	100	97.101	Dipodomys_ordii
ENSCJAG00000007514	SNRNP200	100	74.302	FBgn0263599	l(3)72Ab	99	74.209	Drosophila_melanogaster
ENSCJAG00000007514	SNRNP200	100	98.936	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSCJAG00000007514	SNRNP200	83	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSCJAG00000007514	SNRNP200	100	98.695	ENSEASG00005001884	SNRNP200	100	98.695	Equus_asinus_asinus
ENSCJAG00000007514	SNRNP200	100	99.813	ENSECAG00000019675	SNRNP200	100	99.813	Equus_caballus
ENSCJAG00000007514	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSCJAG00000007514	SNRNP200	99	90.841	ENSELUG00000018948	snrnp200	99	90.730	Esox_lucius
ENSCJAG00000007514	SNRNP200	100	99.860	ENSFCAG00000010699	SNRNP200	100	99.860	Felis_catus
ENSCJAG00000007514	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSCJAG00000007514	SNRNP200	100	99.579	ENSFDAG00000004683	SNRNP200	100	99.579	Fukomys_damarensis
ENSCJAG00000007514	SNRNP200	100	87.781	ENSFHEG00000003786	snrnp200	99	87.781	Fundulus_heteroclitus
ENSCJAG00000007514	SNRNP200	100	89.673	ENSGMOG00000004881	snrnp200	99	89.626	Gadus_morhua
ENSCJAG00000007514	SNRNP200	100	88.015	ENSGAFG00000010807	snrnp200	99	88.015	Gambusia_affinis
ENSCJAG00000007514	SNRNP200	100	89.958	ENSGACG00000011474	snrnp200	99	89.865	Gasterosteus_aculeatus
ENSCJAG00000007514	SNRNP200	95	97.686	ENSGAGG00000016069	SNRNP200	99	97.686	Gopherus_agassizii
ENSCJAG00000007514	SNRNP200	100	100.000	ENSGGOG00000005174	SNRNP200	100	100.000	Gorilla_gorilla
ENSCJAG00000007514	SNRNP200	97	87.727	ENSHBUG00000011322	snrnp200	99	87.774	Haplochromis_burtoni
ENSCJAG00000007514	SNRNP200	100	99.672	ENSHGLG00000006654	SNRNP200	100	99.672	Heterocephalus_glaber_female
ENSCJAG00000007514	SNRNP200	100	99.672	ENSHGLG00100018594	SNRNP200	100	99.672	Heterocephalus_glaber_male
ENSCJAG00000007514	SNRNP200	50	81.844	ENSIPUG00000007770	-	89	81.818	Ictalurus_punctatus
ENSCJAG00000007514	SNRNP200	100	99.813	ENSSTOG00000016351	SNRNP200	100	99.813	Ictidomys_tridecemlineatus
ENSCJAG00000007514	SNRNP200	100	99.625	ENSJJAG00000023659	Snrnp200	100	99.625	Jaculus_jaculus
ENSCJAG00000007514	SNRNP200	100	87.541	ENSKMAG00000003665	snrnp200	99	87.541	Kryptolebias_marmoratus
ENSCJAG00000007514	SNRNP200	100	90.262	ENSLBEG00000021585	snrnp200	99	90.262	Labrus_bergylta
ENSCJAG00000007514	SNRNP200	82	94.664	ENSLACG00000000226	SNRNP200	99	94.664	Latimeria_chalumnae
ENSCJAG00000007514	SNRNP200	100	92.182	ENSLOCG00000015198	snrnp200	99	92.182	Lepisosteus_oculatus
ENSCJAG00000007514	SNRNP200	100	99.438	ENSLAFG00000015626	SNRNP200	100	99.438	Loxodonta_africana
ENSCJAG00000007514	SNRNP200	100	100.000	ENSMFAG00000040174	SNRNP200	100	100.000	Macaca_fascicularis
ENSCJAG00000007514	SNRNP200	100	100.000	ENSMMUG00000023261	SNRNP200	100	100.000	Macaca_mulatta
ENSCJAG00000007514	SNRNP200	100	99.860	ENSMNEG00000032398	SNRNP200	100	99.860	Macaca_nemestrina
ENSCJAG00000007514	SNRNP200	100	100.000	ENSMLEG00000019083	SNRNP200	100	100.000	Mandrillus_leucophaeus
ENSCJAG00000007514	SNRNP200	100	90.173	ENSMAMG00000007851	snrnp200	99	90.126	Mastacembelus_armatus
ENSCJAG00000007514	SNRNP200	97	87.727	ENSMZEG00005010787	snrnp200	99	87.774	Maylandia_zebra
ENSCJAG00000007514	SNRNP200	97	97.242	ENSMGAG00000001831	SNRNP200	100	97.242	Meleagris_gallopavo
ENSCJAG00000007514	SNRNP200	100	99.766	ENSMAUG00000011825	Snrnp200	100	99.766	Mesocricetus_auratus
ENSCJAG00000007514	SNRNP200	100	99.813	ENSMICG00000004710	SNRNP200	100	99.813	Microcebus_murinus
ENSCJAG00000007514	SNRNP200	100	97.191	ENSMOCG00000011814	Snrnp200	100	97.191	Microtus_ochrogaster
ENSCJAG00000007514	SNRNP200	99	88.962	ENSMMOG00000014167	snrnp200	99	88.858	Mola_mola
ENSCJAG00000007514	SNRNP200	100	98.923	ENSMODG00000008475	SNRNP200	100	98.923	Monodelphis_domestica
ENSCJAG00000007514	SNRNP200	99	90.794	ENSMALG00000001973	snrnp200	99	90.684	Monopterus_albus
ENSCJAG00000007514	SNRNP200	100	99.579	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.579	Mus_caroli
ENSCJAG00000007514	SNRNP200	100	99.625	ENSMUSG00000003660	Snrnp200	100	99.625	Mus_musculus
ENSCJAG00000007514	SNRNP200	100	99.672	MGP_PahariEiJ_G0025695	Snrnp200	100	99.672	Mus_pahari
ENSCJAG00000007514	SNRNP200	100	99.625	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSCJAG00000007514	SNRNP200	100	99.766	ENSMPUG00000008949	SNRNP200	100	99.766	Mustela_putorius_furo
ENSCJAG00000007514	SNRNP200	100	99.252	ENSMLUG00000010493	SNRNP200	100	99.252	Myotis_lucifugus
ENSCJAG00000007514	SNRNP200	100	95.552	ENSMLUG00000027511	-	100	95.552	Myotis_lucifugus
ENSCJAG00000007514	SNRNP200	100	99.860	ENSNGAG00000021993	Snrnp200	100	99.860	Nannospalax_galili
ENSCJAG00000007514	SNRNP200	90	90.261	ENSNBRG00000017960	snrnp200	98	90.261	Neolamprologus_brichardi
ENSCJAG00000007514	SNRNP200	100	98.632	ENSNLEG00000000025	SNRNP200	100	96.377	Nomascus_leucogenys
ENSCJAG00000007514	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSCJAG00000007514	SNRNP200	100	95.927	ENSOPRG00000015464	SNRNP200	100	95.927	Ochotona_princeps
ENSCJAG00000007514	SNRNP200	100	99.532	ENSODEG00000008366	SNRNP200	100	99.532	Octodon_degus
ENSCJAG00000007514	SNRNP200	99	90.465	ENSONIG00000010714	snrnp200	99	90.356	Oreochromis_niloticus
ENSCJAG00000007514	SNRNP200	100	99.719	ENSOCUG00000009864	SNRNP200	100	99.719	Oryctolagus_cuniculus
ENSCJAG00000007514	SNRNP200	100	90.309	ENSORLG00000012286	snrnp200	100	90.309	Oryzias_latipes
ENSCJAG00000007514	SNRNP200	100	90.356	ENSORLG00020004648	snrnp200	100	90.356	Oryzias_latipes_hni
ENSCJAG00000007514	SNRNP200	100	90.309	ENSORLG00015019114	snrnp200	100	90.339	Oryzias_latipes_hsok
ENSCJAG00000007514	SNRNP200	99	90.559	ENSOMEG00000011834	snrnp200	99	90.449	Oryzias_melastigma
ENSCJAG00000007514	SNRNP200	100	99.860	ENSOGAG00000006879	SNRNP200	100	99.860	Otolemur_garnettii
ENSCJAG00000007514	SNRNP200	100	99.088	ENSOARG00000013949	SNRNP200	100	98.409	Ovis_aries
ENSCJAG00000007514	SNRNP200	100	100.000	ENSPPAG00000041559	SNRNP200	100	100.000	Pan_paniscus
ENSCJAG00000007514	SNRNP200	100	99.860	ENSPPRG00000004435	SNRNP200	100	99.860	Panthera_pardus
ENSCJAG00000007514	SNRNP200	100	99.391	ENSPTIG00000006380	SNRNP200	100	99.391	Panthera_tigris_altaica
ENSCJAG00000007514	SNRNP200	100	100.000	ENSPTRG00000012230	SNRNP200	100	100.000	Pan_troglodytes
ENSCJAG00000007514	SNRNP200	100	100.000	ENSPANG00000006017	SNRNP200	100	100.000	Papio_anubis
ENSCJAG00000007514	SNRNP200	100	91.105	ENSPKIG00000014762	snrnp200	99	91.105	Paramormyrops_kingsleyae
ENSCJAG00000007514	SNRNP200	100	97.269	ENSPSIG00000008580	SNRNP200	100	96.724	Pelodiscus_sinensis
ENSCJAG00000007514	SNRNP200	100	99.130	ENSPEMG00000020700	-	100	99.541	Peromyscus_maniculatus_bairdii
ENSCJAG00000007514	SNRNP200	100	98.923	ENSPCIG00000023050	SNRNP200	100	98.923	Phascolarctos_cinereus
ENSCJAG00000007514	SNRNP200	100	90.360	ENSPFOG00000015110	snrnp200	99	90.360	Poecilia_formosa
ENSCJAG00000007514	SNRNP200	97	90.220	ENSPLAG00000006711	snrnp200	99	90.220	Poecilia_latipinna
ENSCJAG00000007514	SNRNP200	97	90.165	ENSPMEG00000021166	snrnp200	99	90.165	Poecilia_mexicana
ENSCJAG00000007514	SNRNP200	100	90.449	ENSPREG00000008875	snrnp200	99	90.449	Poecilia_reticulata
ENSCJAG00000007514	SNRNP200	100	99.953	ENSPPYG00000012068	SNRNP200	100	99.953	Pongo_abelii
ENSCJAG00000007514	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSCJAG00000007514	SNRNP200	100	99.860	ENSPCOG00000024608	SNRNP200	100	99.860	Propithecus_coquereli
ENSCJAG00000007514	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSCJAG00000007514	SNRNP200	99	86.042	ENSPNYG00000017476	snrnp200	99	85.948	Pundamilia_nyererei
ENSCJAG00000007514	SNRNP200	100	86.096	ENSPNAG00000010998	snrnp200	99	86.096	Pygocentrus_nattereri
ENSCJAG00000007514	SNRNP200	100	99.766	ENSRNOG00000012157	Snrnp200	100	99.766	Rattus_norvegicus
ENSCJAG00000007514	SNRNP200	100	100.000	ENSRBIG00000044690	-	100	100.000	Rhinopithecus_bieti
ENSCJAG00000007514	SNRNP200	100	100.000	ENSRROG00000037952	-	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000007514	SNRNP200	100	100.000	ENSSBOG00000035471	SNRNP200	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000007514	SNRNP200	97	98.839	ENSSHAG00000000758	SNRNP200	100	98.839	Sarcophilus_harrisii
ENSCJAG00000007514	SNRNP200	99	91.639	ENSSFOG00015018826	snrnp200	99	91.526	Scleropages_formosus
ENSCJAG00000007514	SNRNP200	99	90.465	ENSSMAG00000005463	snrnp200	99	90.356	Scophthalmus_maximus
ENSCJAG00000007514	SNRNP200	99	90.700	ENSSDUG00000021410	snrnp200	99	90.590	Seriola_dumerili
ENSCJAG00000007514	SNRNP200	99	90.653	ENSSLDG00000010884	snrnp200	99	90.543	Seriola_lalandi_dorsalis
ENSCJAG00000007514	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSCJAG00000007514	SNRNP200	100	97.519	ENSSPUG00000003726	-	100	97.519	Sphenodon_punctatus
ENSCJAG00000007514	SNRNP200	99	90.747	ENSSPAG00000001842	snrnp200	99	90.637	Stegastes_partitus
ENSCJAG00000007514	SNRNP200	100	99.672	ENSSSCG00000008127	SNRNP200	100	99.672	Sus_scrofa
ENSCJAG00000007514	SNRNP200	99	87.975	ENSTGUG00000014475	-	100	87.975	Taeniopygia_guttata
ENSCJAG00000007514	SNRNP200	99	90.371	ENSTRUG00000001307	snrnp200	99	90.262	Takifugu_rubripes
ENSCJAG00000007514	SNRNP200	100	85.925	ENSTNIG00000004320	snrnp200	100	85.925	Tetraodon_nigroviridis
ENSCJAG00000007514	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSCJAG00000007514	SNRNP200	100	99.485	ENSTTRG00000004983	SNRNP200	100	99.485	Tursiops_truncatus
ENSCJAG00000007514	SNRNP200	95	90.729	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSCJAG00000007514	SNRNP200	100	99.860	ENSUMAG00000012385	SNRNP200	100	99.860	Ursus_maritimus
ENSCJAG00000007514	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSCJAG00000007514	SNRNP200	100	100.000	ENSVVUG00000026247	SNRNP200	100	100.000	Vulpes_vulpes
ENSCJAG00000007514	SNRNP200	100	94.343	ENSXETG00000001243	snrnp200	100	94.343	Xenopus_tropicalis
ENSCJAG00000007514	SNRNP200	97	90.471	ENSXMAG00000002058	snrnp200	98	90.471	Xiphophorus_maculatus