EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCJAG00000007960 (Gene tree)
Gene ID
100396934
Gene Symbol
-
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Callithrix_jacchus
Status
putative
Strand
Minus strand
Length
17076 bases
Position
chrNTIC01038834.1:80229123-80246198
Accession
100396934
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCJAP00000014751RRM_1PF00076.228.3e-1511
ENSCJAP00000059597RRM_1PF00076.221.1e-1411
ENSCJAP00000053518RRM_1PF00076.221.3e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCJAT00000015565-813-ENSCJAP00000014751270 (aa)-F7IKW8
ENSCJAT00000068369-921-ENSCJAP00000059597306 (aa)XP_002753680F7IKW7
ENSCJAT00000084788-1041-ENSCJAP00000053518346 (aa)-A0A2R8M4C0
ENSCJAT00000081743-645-ENSCJAP00000060679214 (aa)-A0A2R8PCH7
Gene Model
Click here to download ENSCJAG00000007960's gene model file
Pathways
Pathway IDPathway NameSource
cjc03015mRNA surveillance pathwayKEGG
cjc05164Influenza AKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000007960's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCJAG00000007960-6698.315ENSCJAG00000004407-8998.315
ENSCJAG00000007960-7153.465ENSCJAG00000045284PABPN1L7152.500
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCJAG00000007960-10095.665ENSG00000258643BCL2L2-PABPN110095.665Homo_sapiens
ENSCJAG00000007960-100100.000ENSG00000100836PABPN1100100.000Homo_sapiens
ENSCJAG00000007960-8475.966ENSAPOG00000016425pabpn19975.536Acanthochromis_polyacanthus
ENSCJAG00000007960-70100.000ENSAMEG00000007048BCL2L2-PABPN1100100.000Ailuropoda_melanoleuca
ENSCJAG00000007960-7875.799ENSACIG00000021744pabpn19482.143Amphilophus_citrinellus
ENSCJAG00000007960-8475.966ENSAOCG00000015805pabpn19975.536Amphiprion_ocellaris
ENSCJAG00000007960-8475.966ENSAPEG00000009623pabpn19975.536Amphiprion_percula
ENSCJAG00000007960-8476.395ENSATEG00000020531pabpn19975.966Anabas_testudineus
ENSCJAG00000007960-7588.670ENSACAG00000006185-8379.747Anolis_carolinensis
ENSCJAG00000007960-10099.422ENSANAG00000024513-10099.422Aotus_nancymaae
ENSCJAG00000007960-7875.455ENSACLG00000016374pabpn17674.336Astatotilapia_calliptera
ENSCJAG00000007960-8477.682ENSAMXG00000000452pabpn19483.929Astyanax_mexicanus
ENSCJAG00000007960-9275.177ENSBTAG00000050594-8987.255Bos_taurus
ENSCJAG00000007960-10099.346ENSBTAG00000006884PABPN110099.346Bos_taurus
ENSCJAG00000007960-7198.429ENSBTAG00000053753-7198.429Bos_taurus
ENSCJAG00000007960-5460.274WBGene00003904pabp-29153.886Caenorhabditis_elegans
ENSCJAG00000007960-10097.059ENSCAFG00000011482PABPN110097.059Canis_familiaris
ENSCJAG00000007960-100100.000ENSCAFG00020007298-100100.000Canis_lupus_dingo
ENSCJAG00000007960-100100.000ENSCAFG00020006651-100100.000Canis_lupus_dingo
ENSCJAG00000007960-10099.673ENSCHIG00000012184PABPN110099.673Capra_hircus
ENSCJAG00000007960-10095.954ENSTSYG00000033996BCL2L2-PABPN1100100.000Carlito_syrichta
ENSCJAG00000007960-5199.275ENSCAPG00000009461-9999.275Cavia_aperea
ENSCJAG00000007960-10098.366ENSCPOG00000025574PABPN110098.366Cavia_porcellus
ENSCJAG00000007960-100100.000ENSCCAG00000033954BCL2L2-PABPN1100100.000Cebus_capucinus
ENSCJAG00000007960-100100.000ENSCATG00000038536BCL2L2-PABPN1100100.000Cercocebus_atys
ENSCJAG00000007960-7680.000ENSCLAG00000012423PABPN15790.303Chinchilla_lanigera
ENSCJAG00000007960-10098.366ENSCSAG00000016036PABPN110098.366Chlorocebus_sabaeus
ENSCJAG00000007960-7688.293ENSCHOG00000004798BCL2L2-PABPN18888.293Choloepus_hoffmanni
ENSCJAG00000007960-6292.814ENSCPBG00000026060-9492.814Chrysemys_picta_bellii
ENSCJAG00000007960-7462.687ENSCING00000012468-8465.174Ciona_intestinalis
ENSCJAG00000007960-6660.674ENSCSAVG00000002001-9362.275Ciona_savignyi
ENSCJAG00000007960-10095.954ENSCANG00000009750BCL2L2-PABPN1100100.000Colobus_angolensis_palliatus
ENSCJAG00000007960-9682.712ENSCANG00000030980-9479.845Colobus_angolensis_palliatus
ENSCJAG00000007960-10097.386ENSCGRG00001019696Pabpn110099.438Cricetulus_griseus_chok1gshd
ENSCJAG00000007960-6699.438ENSCGRG00000011102Pabpn110099.438Cricetulus_griseus_crigri
ENSCJAG00000007960-8476.395ENSCSEG00000008774pabpn19975.966Cynoglossus_semilaevis
ENSCJAG00000007960-8473.391ENSCVAG00000003152pabpn19974.678Cyprinodon_variegatus
ENSCJAG00000007960-8477.253ENSDARG00000045373pabpn19976.824Danio_rerio
ENSCJAG00000007960-5261.702ENSDARG00000087996pabpn1l7266.387Danio_rerio
ENSCJAG00000007960-100100.000ENSDNOG00000023682PABPN1100100.000Dasypus_novemcinctus
ENSCJAG00000007960-10098.693ENSDORG00000028966-10098.693Dipodomys_ordii
ENSCJAG00000007960-8159.174FBgn0005648Pabp28263.351Drosophila_melanogaster
ENSCJAG00000007960-8471.179ENSEBUG00000002322pabpn19871.616Eptatretus_burgeri
ENSCJAG00000007960-100100.000ENSEASG00005011716PABPN1100100.000Equus_asinus_asinus
ENSCJAG00000007960-9999.671ENSECAG00000011652PABPN199100.000Equus_caballus
ENSCJAG00000007960-9391.197ENSEEUG00000012973-9776.125Erinaceus_europaeus
ENSCJAG00000007960-8478.059ENSELUG00000022654pabpn18585.437Esox_lucius
ENSCJAG00000007960-100100.000ENSFCAG00000031922PABPN1100100.000Felis_catus
ENSCJAG00000007960-6698.876ENSFDAG00000018381BCL2L2-PABPN110098.876Fukomys_damarensis
ENSCJAG00000007960-8471.674ENSFHEG00000007215pabpn19973.820Fundulus_heteroclitus
ENSCJAG00000007960-7976.471ENSGMOG00000003922pabpn17776.471Gadus_morhua
ENSCJAG00000007960-7289.796ENSGALG00000052930-7973.432Gallus_gallus
ENSCJAG00000007960-8476.068ENSGAFG00000017099pabpn19975.641Gambusia_affinis
ENSCJAG00000007960-8473.061ENSGACG00000002167pabpn19972.653Gasterosteus_aculeatus
ENSCJAG00000007960-9382.168ENSGGOG00000025919-9884.459Gorilla_gorilla
ENSCJAG00000007960-100100.000ENSGGOG00000022683-100100.000Gorilla_gorilla
ENSCJAG00000007960-9278.014ENSGGOG00000039675-9175.934Gorilla_gorilla
ENSCJAG00000007960-8476.395ENSHBUG00000019523pabpn19975.966Haplochromis_burtoni
ENSCJAG00000007960-9274.733ENSHGLG00000018588-7181.429Heterocephalus_glaber_female
ENSCJAG00000007960-10098.366ENSHGLG00000002927-10098.366Heterocephalus_glaber_female
ENSCJAG00000007960-6276.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSCJAG00000007960-9269.643ENSHGLG00100015565-7281.429Heterocephalus_glaber_male
ENSCJAG00000007960-9795.509ENSHGLG00100006673-10099.438Heterocephalus_glaber_male
ENSCJAG00000007960-6288.304ENSHGLG00100018935-9488.304Heterocephalus_glaber_male
ENSCJAG00000007960-8472.414ENSHCOG00000004655pabpn19975.107Hippocampus_comes
ENSCJAG00000007960-8475.109ENSIPUG00000000180-8681.313Ictalurus_punctatus
ENSCJAG00000007960-8476.824ENSIPUG00000008085PABPN19976.395Ictalurus_punctatus
ENSCJAG00000007960-66100.000ENSSTOG00000029847BCL2L2-PABPN1100100.000Ictidomys_tridecemlineatus
ENSCJAG00000007960-66100.000ENSJJAG00000023507Gm20521100100.000Jaculus_jaculus
ENSCJAG00000007960-8475.641ENSKMAG00000018748pabpn19975.214Kryptolebias_marmoratus
ENSCJAG00000007960-8476.395ENSLBEG00000027266pabpn19975.966Labrus_bergylta
ENSCJAG00000007960-6687.640ENSLACG00000000646pabpn17989.444Latimeria_chalumnae
ENSCJAG00000007960-7765.238ENSLOCG00000004694pabpn1l9565.700Lepisosteus_oculatus
ENSCJAG00000007960-7977.679ENSLOCG00000000796pabpn16984.021Lepisosteus_oculatus
ENSCJAG00000007960-5699.338ENSLAFG00000031227-10099.338Loxodonta_africana
ENSCJAG00000007960-5292.908ENSMFAG00000031355-9992.908Macaca_fascicularis
ENSCJAG00000007960-10095.954ENSMFAG00000032183BCL2L2-PABPN1100100.000Macaca_fascicularis
ENSCJAG00000007960-10095.954ENSMMUG00000014747BCL2L2-PABPN1100100.000Macaca_mulatta
ENSCJAG00000007960-9778.595ENSMMUG00000048382-9570.775Macaca_mulatta
ENSCJAG00000007960-9677.692ENSMNEG00000035750-9992.908Macaca_nemestrina
ENSCJAG00000007960-100100.000ENSMNEG00000045065BCL2L2-PABPN1100100.000Macaca_nemestrina
ENSCJAG00000007960-9774.324ENSMLEG00000034623-9990.780Mandrillus_leucophaeus
ENSCJAG00000007960-10095.954ENSMLEG00000043862BCL2L2-PABPN1100100.000Mandrillus_leucophaeus
ENSCJAG00000007960-7976.786ENSMAMG00000007979pabpn17875.217Mastacembelus_armatus
ENSCJAG00000007960-7976.018ENSMZEG00005011904pabpn17775.566Maylandia_zebra
ENSCJAG00000007960-9897.342ENSMAUG00000007383Gm205219997.342Mesocricetus_auratus
ENSCJAG00000007960-10099.673ENSMICG00000010002BCL2L2-PABPN110099.673Microcebus_murinus
ENSCJAG00000007960-10097.059ENSMOCG00000018557Gm2052110097.059Microtus_ochrogaster
ENSCJAG00000007960-8476.824ENSMMOG00000005405pabpn19976.395Mola_mola
ENSCJAG00000007960-9996.700ENSMODG00000004535-9996.700Monodelphis_domestica
ENSCJAG00000007960-7976.018ENSMALG00000019612pabpn17875.217Monopterus_albus
ENSCJAG00000007960-10094.220MGP_CAROLIEiJ_G0019276Gm2052110094.220Mus_caroli
ENSCJAG00000007960-10096.405MGP_CAROLIEiJ_G0019277Pabpn110097.753Mus_caroli
ENSCJAG00000007960-10096.732ENSMUSG00000022194Pabpn110098.315Mus_musculus
ENSCJAG00000007960-10094.509ENSMUSG00000092232Gm2052110094.509Mus_musculus
ENSCJAG00000007960-10096.732MGP_PahariEiJ_G0030295Pabpn110098.315Mus_pahari
ENSCJAG00000007960-10094.509MGP_PahariEiJ_G0030294Gm2052110094.509Mus_pahari
ENSCJAG00000007960-10094.509MGP_SPRETEiJ_G0020165Gm2052110094.509Mus_spretus
ENSCJAG00000007960-10096.732MGP_SPRETEiJ_G0020166Pabpn110098.315Mus_spretus
ENSCJAG00000007960-61100.000ENSMPUG00000006775-99100.000Mustela_putorius_furo
ENSCJAG00000007960-7097.884ENSMLUG00000003800-10097.884Myotis_lucifugus
ENSCJAG00000007960-9289.085ENSMLUG00000012452-9278.445Myotis_lucifugus
ENSCJAG00000007960-9486.822ENSMLUG00000028677-9287.550Myotis_lucifugus
ENSCJAG00000007960-10095.376ENSNGAG00000019529Gm2052110095.376Nannospalax_galili
ENSCJAG00000007960-7976.018ENSNBRG00000023955pabpn19482.143Neolamprologus_brichardi
ENSCJAG00000007960-10095.954ENSNLEG00000015007-10095.954Nomascus_leucogenys
ENSCJAG00000007960-9776.510ENSNLEG00000030598-7981.991Nomascus_leucogenys
ENSCJAG00000007960-5572.973ENSNLEG00000035292-9972.973Nomascus_leucogenys
ENSCJAG00000007960-6687.079ENSODEG00000011555-8986.826Octodon_degus
ENSCJAG00000007960-9282.206ENSODEG00000003739-7586.425Octodon_degus
ENSCJAG00000007960-10098.366ENSODEG00000002083BCL2L2-PABPN110098.366Octodon_degus
ENSCJAG00000007960-7976.018ENSONIG00000008112pabpn17775.566Oreochromis_niloticus
ENSCJAG00000007960-5496.575ENSOANG00000009218-10096.575Ornithorhynchus_anatinus
ENSCJAG00000007960-9996.711ENSOCUG00000016174PABPN110096.711Oryctolagus_cuniculus
ENSCJAG00000007960-8374.026ENSORLG00000027900pabpn19773.593Oryzias_latipes
ENSCJAG00000007960-7677.725ENSORLG00020004681pabpn17875.652Oryzias_latipes_hni
ENSCJAG00000007960-8476.824ENSORLG00015000018pabpn19976.395Oryzias_latipes_hsok
ENSCJAG00000007960-8373.593ENSOMEG00000016618pabpn18373.160Oryzias_melastigma
ENSCJAG00000007960-100100.000ENSOGAG00000008710PABPN1100100.000Otolemur_garnettii
ENSCJAG00000007960-10095.954ENSOARG00000019336BCL2L2-PABPN19295.954Ovis_aries
ENSCJAG00000007960-6283.234ENSPPAG00000039421-9383.234Pan_paniscus
ENSCJAG00000007960-10095.954ENSPPAG00000028984BCL2L2-PABPN199100.000Pan_paniscus
ENSCJAG00000007960-100100.000ENSPPRG00000010567PABPN1100100.000Panthera_pardus
ENSCJAG00000007960-66100.000ENSPTIG00000001063BCL2L2-PABPN1100100.000Panthera_tigris_altaica
ENSCJAG00000007960-9178.884ENSPTRG00000047273-9079.592Pan_troglodytes
ENSCJAG00000007960-100100.000ENSPTRG00000006167BCL2L2100100.000Pan_troglodytes
ENSCJAG00000007960-9779.054ENSPANG00000023326-9992.908Papio_anubis
ENSCJAG00000007960-100100.000ENSPANG00000021100BCL2L2-PABPN1100100.000Papio_anubis
ENSCJAG00000007960-8476.395ENSPKIG00000018052pabpn19975.966Paramormyrops_kingsleyae
ENSCJAG00000007960-7363.131ENSPKIG00000008340pabpn1l9263.131Paramormyrops_kingsleyae
ENSCJAG00000007960-7085.789ENSPKIG00000008144-6782.266Paramormyrops_kingsleyae
ENSCJAG00000007960-7975.566ENSPMGG00000022027pabpn18075.113Periophthalmus_magnuspinnatus
ENSCJAG00000007960-10097.386ENSPEMG00000008332Gm2052110097.386Peromyscus_maniculatus_bairdii
ENSCJAG00000007960-6675.000ENSPMAG00000006212pabpn18476.355Petromyzon_marinus
ENSCJAG00000007960-10096.732ENSPCIG00000027751-10096.732Phascolarctos_cinereus
ENSCJAG00000007960-8473.077ENSPFOG00000010351pabpn19874.359Poecilia_formosa
ENSCJAG00000007960-7975.225ENSPLAG00000022696pabpn17874.459Poecilia_latipinna
ENSCJAG00000007960-8473.077ENSPMEG00000020856pabpn19974.359Poecilia_mexicana
ENSCJAG00000007960-8473.504ENSPREG00000011278pabpn19974.786Poecilia_reticulata
ENSCJAG00000007960-9694.218ENSPPYG00000005663PABPN19994.218Pongo_abelii
ENSCJAG00000007960-7384.500ENSPCAG00000005902PABPN19273.333Procavia_capensis
ENSCJAG00000007960-10099.673ENSPCOG00000028047BCL2L2-PABPN110099.673Propithecus_coquereli
ENSCJAG00000007960-10097.059ENSPVAG00000005270PABPN110097.059Pteropus_vampyrus
ENSCJAG00000007960-8476.395ENSPNYG00000013182pabpn19975.966Pundamilia_nyererei
ENSCJAG00000007960-8477.682ENSPNAG00000023526pabpn19977.253Pygocentrus_nattereri
ENSCJAG00000007960-7462.500ENSPNAG00000021666pabpn1l9464.179Pygocentrus_nattereri
ENSCJAG00000007960-10097.059ENSRNOG00000042195Pabpn110097.059Rattus_norvegicus
ENSCJAG00000007960-9783.667ENSRBIG00000039547-9275.177Rhinopithecus_bieti
ENSCJAG00000007960-9285.357ENSRBIG00000042811-9086.636Rhinopithecus_bieti
ENSCJAG00000007960-9795.808ENSRBIG00000040762BCL2L2-PABPN19995.808Rhinopithecus_bieti
ENSCJAG00000007960-9282.143ENSRROG00000036409-8371.756Rhinopithecus_roxellana
ENSCJAG00000007960-9983.607ENSRROG00000040409-9275.532Rhinopithecus_roxellana
ENSCJAG00000007960-9795.509ENSRROG00000045535BCL2L2-PABPN1100100.000Rhinopithecus_roxellana
ENSCJAG00000007960-10099.422ENSSBOG00000026930BCL2L2-PABPN110099.422Saimiri_boliviensis_boliviensis
ENSCJAG00000007960-8571.186ENSSHAG00000007707-9970.386Sarcophilus_harrisii
ENSCJAG00000007960-7097.354ENSSHAG00000014841-8797.354Sarcophilus_harrisii
ENSCJAG00000007960-8475.966ENSSFOG00015014718pabpn19975.536Scleropages_formosus
ENSCJAG00000007960-7781.340ENSSFOG00015012565pabpn19081.553Scleropages_formosus
ENSCJAG00000007960-7959.434ENSSFOG00015015833pabpn1l8763.918Scleropages_formosus
ENSCJAG00000007960-8476.395ENSSMAG00000020157pabpn19975.966Scophthalmus_maximus
ENSCJAG00000007960-7976.018ENSSDUG00000020582pabpn17875.217Seriola_dumerili
ENSCJAG00000007960-8476.395ENSSLDG00000007118pabpn19975.966Seriola_lalandi_dorsalis
ENSCJAG00000007960-6291.617ENSSPUG00000018308-9491.617Sphenodon_punctatus
ENSCJAG00000007960-8476.395ENSSPAG00000021658pabpn19975.966Stegastes_partitus
ENSCJAG00000007960-6555.114ENSSSCG00000038472-9154.491Sus_scrofa
ENSCJAG00000007960-7873.810ENSSSCG00000034805-7669.118Sus_scrofa
ENSCJAG00000007960-100100.000ENSSSCG00000002023PABPN1100100.000Sus_scrofa
ENSCJAG00000007960-8476.824ENSTRUG00000023664pabpn19976.395Takifugu_rubripes
ENSCJAG00000007960-7779.524ENSTNIG00000005369pabpn19379.710Tetraodon_nigroviridis
ENSCJAG00000007960-10099.346ENSUAMG00000024460PABPN110099.346Ursus_americanus
ENSCJAG00000007960-10095.954ENSUMAG00000014288BCL2L2-PABPN110095.954Ursus_maritimus
ENSCJAG00000007960-10095.954ENSVVUG00000019912BCL2L2-PABPN110095.954Vulpes_vulpes
ENSCJAG00000007960-7390.306ENSXETG00000014597pabpn16692.893Xenopus_tropicalis
ENSCJAG00000007960-6568.927ENSXCOG00000005158pabpn18981.579Xiphophorus_couchianus
ENSCJAG00000007960-8473.932ENSXMAG00000006196pabpn19975.214Xiphophorus_maculatus

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