EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000008111 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 678 bases
Position: chrNTIC01034389.1:112382337-112383014
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000014967	RRM_1	PF00076.22	1.4e-29	1	2
ENSCJAP00000014967	RRM_1	PF00076.22	1.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000015790	-	678	-	ENSCJAP00000014967	225 (aa)	-	F7ISW2

Gene Model

Click here to download ENSCJAG00000008111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000008111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000008111	-	88	91.371	ENSCJAG00000041713	-	97	87.324
ENSCJAG00000008111	-	78	65.909	ENSCJAG00000001187	SRSF9	91	56.897
ENSCJAG00000008111	-	71	44.578	ENSCJAG00000014884	SRSF5	86	38.710
ENSCJAG00000008111	-	81	38.660	ENSCJAG00000048403	SRSF6	62	39.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000008111	-	88	91.371	ENSG00000136450	SRSF1	98	90.625	Homo_sapiens
ENSCJAG00000008111	-	88	84.236	ENSAPOG00000008542	-	81	83.168	Acanthochromis_polyacanthus
ENSCJAG00000008111	-	86	83.420	ENSAPOG00000002748	-	78	82.902	Acanthochromis_polyacanthus
ENSCJAG00000008111	-	88	87.310	ENSAMEG00000002635	SRSF1	78	88.776	Ailuropoda_melanoleuca
ENSCJAG00000008111	-	86	83.420	ENSACIG00000008091	srsf1a	83	82.383	Amphilophus_citrinellus
ENSCJAG00000008111	-	88	84.236	ENSAOCG00000000337	-	81	83.168	Amphiprion_ocellaris
ENSCJAG00000008111	-	86	83.938	ENSAOCG00000010671	-	83	82.902	Amphiprion_ocellaris
ENSCJAG00000008111	-	88	84.236	ENSAPEG00000023352	-	80	83.168	Amphiprion_percula
ENSCJAG00000008111	-	86	83.938	ENSAPEG00000009915	-	83	82.902	Amphiprion_percula
ENSCJAG00000008111	-	90	80.693	ENSATEG00000021567	-	81	82.143	Anabas_testudineus
ENSCJAG00000008111	-	86	83.938	ENSATEG00000022403	-	77	82.902	Anabas_testudineus
ENSCJAG00000008111	-	88	89.340	ENSACAG00000005542	-	79	89.796	Anolis_carolinensis
ENSCJAG00000008111	-	89	69.000	ENSANAG00000025417	-	74	67.347	Aotus_nancymaae
ENSCJAG00000008111	-	88	91.371	ENSANAG00000020583	-	97	87.324	Aotus_nancymaae
ENSCJAG00000008111	-	86	83.417	ENSAMXG00000035996	srsf1a	79	85.427	Astyanax_mexicanus
ENSCJAG00000008111	-	59	73.548	ENSAMXG00000024373	-	72	72.903	Astyanax_mexicanus
ENSCJAG00000008111	-	88	91.371	ENSBTAG00000014766	SRSF1	79	91.837	Bos_taurus
ENSCJAG00000008111	-	88	91.371	ENSCAFG00000017430	SRSF1	77	91.837	Canis_familiaris
ENSCJAG00000008111	-	88	91.371	ENSCAFG00020025632	-	77	91.837	Canis_lupus_dingo
ENSCJAG00000008111	-	88	91.371	ENSCHIG00000010787	SRSF1	79	91.837	Capra_hircus
ENSCJAG00000008111	-	88	91.371	ENSTSYG00000013899	-	97	87.324	Carlito_syrichta
ENSCJAG00000008111	-	88	91.371	ENSCPOG00000032681	-	79	91.837	Cavia_porcellus
ENSCJAG00000008111	-	88	91.371	ENSCCAG00000029484	-	97	87.324	Cebus_capucinus
ENSCJAG00000008111	-	88	91.371	ENSCATG00000042294	-	97	87.324	Cercocebus_atys
ENSCJAG00000008111	-	88	91.371	ENSCLAG00000014707	-	79	91.837	Chinchilla_lanigera
ENSCJAG00000008111	-	88	90.355	ENSCSAG00000005642	-	77	90.816	Chlorocebus_sabaeus
ENSCJAG00000008111	-	88	91.371	ENSCHOG00000001899	SRSF1	79	91.837	Choloepus_hoffmanni
ENSCJAG00000008111	-	88	89.848	ENSCPBG00000009851	-	79	90.306	Chrysemys_picta_bellii
ENSCJAG00000008111	-	88	91.371	ENSCANG00000029726	-	97	87.324	Colobus_angolensis_palliatus
ENSCJAG00000008111	-	88	91.371	ENSCGRG00001000670	Srsf1	77	91.837	Cricetulus_griseus_chok1gshd
ENSCJAG00000008111	-	88	91.371	ENSCGRG00000005590	Srsf1	79	91.837	Cricetulus_griseus_crigri
ENSCJAG00000008111	-	86	83.163	ENSCSEG00000014272	-	81	80.829	Cynoglossus_semilaevis
ENSCJAG00000008111	-	87	77.358	ENSCSEG00000009973	-	81	76.303	Cynoglossus_semilaevis
ENSCJAG00000008111	-	86	82.051	ENSCVAG00000005458	-	91	81.967	Cyprinodon_variegatus
ENSCJAG00000008111	-	86	83.938	ENSCVAG00000018617	-	78	82.902	Cyprinodon_variegatus
ENSCJAG00000008111	-	86	81.373	ENSDARG00000057691	srsf1a	99	82.723	Danio_rerio
ENSCJAG00000008111	-	86	89.175	ENSDARG00000017843	srsf1b	79	89.175	Danio_rerio
ENSCJAG00000008111	-	88	91.371	ENSDNOG00000011737	-	77	91.837	Dasypus_novemcinctus
ENSCJAG00000008111	-	88	91.371	ENSDORG00000015082	Srsf1	79	91.837	Dipodomys_ordii
ENSCJAG00000008111	-	82	90.217	ENSETEG00000005349	-	63	90.710	Echinops_telfairi
ENSCJAG00000008111	-	88	91.371	ENSEASG00005002922	-	77	91.837	Equus_asinus_asinus
ENSCJAG00000008111	-	88	91.371	ENSECAG00000016654	SRSF1	79	91.837	Equus_caballus
ENSCJAG00000008111	-	82	91.304	ENSEEUG00000009255	-	63	91.803	Erinaceus_europaeus
ENSCJAG00000008111	-	86	85.567	ENSELUG00000021646	srsf1a	77	82.990	Esox_lucius
ENSCJAG00000008111	-	88	91.371	ENSFCAG00000002250	-	92	91.351	Felis_catus
ENSCJAG00000008111	-	88	71.574	ENSFALG00000005062	-	77	71.939	Ficedula_albicollis
ENSCJAG00000008111	-	88	91.371	ENSFDAG00000010646	-	79	91.837	Fukomys_damarensis
ENSCJAG00000008111	-	86	83.938	ENSFHEG00000003174	srsf1a	83	82.902	Fundulus_heteroclitus
ENSCJAG00000008111	-	88	81.313	ENSGMOG00000014787	-	80	79.793	Gadus_morhua
ENSCJAG00000008111	-	88	89.848	ENSGALG00000005525	SRSF1	79	90.306	Gallus_gallus
ENSCJAG00000008111	-	88	79.798	ENSGACG00000020621	srsf1b	79	78.571	Gasterosteus_aculeatus
ENSCJAG00000008111	-	88	89.848	ENSGAGG00000022965	-	77	90.306	Gopherus_agassizii
ENSCJAG00000008111	-	88	91.371	ENSGGOG00000004386	SRSF1	97	87.324	Gorilla_gorilla
ENSCJAG00000008111	-	86	83.420	ENSHBUG00000016788	srsf1a	80	82.383	Haplochromis_burtoni
ENSCJAG00000008111	-	73	91.463	ENSHGLG00000000669	-	76	91.463	Heterocephalus_glaber_female
ENSCJAG00000008111	-	73	91.463	ENSHGLG00000000600	-	76	91.463	Heterocephalus_glaber_female
ENSCJAG00000008111	-	88	91.371	ENSHGLG00100016906	-	79	91.837	Heterocephalus_glaber_male
ENSCJAG00000008111	-	86	77.665	ENSHCOG00000018918	srsf1a	77	80.711	Hippocampus_comes
ENSCJAG00000008111	-	86	82.412	ENSIPUG00000017039	srsf1a	79	85.930	Ictalurus_punctatus
ENSCJAG00000008111	-	88	86.802	ENSIPUG00000008750	srsf1b	80	85.714	Ictalurus_punctatus
ENSCJAG00000008111	-	88	91.371	ENSSTOG00000000243	-	95	89.947	Ictidomys_tridecemlineatus
ENSCJAG00000008111	-	88	91.371	ENSJJAG00000000102	-	79	91.837	Jaculus_jaculus
ENSCJAG00000008111	-	56	82.677	ENSJJAG00000014464	-	94	80.159	Jaculus_jaculus
ENSCJAG00000008111	-	86	84.974	ENSKMAG00000019232	srsf1a	78	81.865	Kryptolebias_marmoratus
ENSCJAG00000008111	-	86	82.902	ENSLBEG00000020864	-	83	81.865	Labrus_bergylta
ENSCJAG00000008111	-	88	77.000	ENSLBEG00000015294	-	80	78.392	Labrus_bergylta
ENSCJAG00000008111	-	86	87.629	ENSLACG00000014160	srsf1a	73	86.598	Latimeria_chalumnae
ENSCJAG00000008111	-	88	88.325	ENSLOCG00000005994	srsf1a	79	87.245	Lepisosteus_oculatus
ENSCJAG00000008111	-	88	91.371	ENSLAFG00000025743	SRSF1	79	91.837	Loxodonta_africana
ENSCJAG00000008111	-	88	91.371	ENSMFAG00000040003	-	97	87.324	Macaca_fascicularis
ENSCJAG00000008111	-	88	89.848	ENSMMUG00000003260	-	94	90.256	Macaca_mulatta
ENSCJAG00000008111	-	88	91.371	ENSMMUG00000004725	SRSF1	97	87.324	Macaca_mulatta
ENSCJAG00000008111	-	88	91.371	ENSMNEG00000027680	-	97	87.324	Macaca_nemestrina
ENSCJAG00000008111	-	88	89.340	ENSMNEG00000015983	-	77	89.796	Macaca_nemestrina
ENSCJAG00000008111	-	88	86.294	ENSMLEG00000015243	-	77	87.245	Mandrillus_leucophaeus
ENSCJAG00000008111	-	88	91.371	ENSMLEG00000040509	SRSF1	79	91.837	Mandrillus_leucophaeus
ENSCJAG00000008111	-	88	82.741	ENSMAMG00000019687	-	79	82.143	Mastacembelus_armatus
ENSCJAG00000008111	-	88	87.310	ENSMAMG00000019691	-	81	85.714	Mastacembelus_armatus
ENSCJAG00000008111	-	86	83.938	ENSMAMG00000018454	-	78	82.902	Mastacembelus_armatus
ENSCJAG00000008111	-	88	91.371	ENSMAUG00000021845	Srsf1	79	91.837	Mesocricetus_auratus
ENSCJAG00000008111	-	88	91.371	ENSMICG00000013639	-	97	87.324	Microcebus_murinus
ENSCJAG00000008111	-	88	91.371	ENSMOCG00000001996	Srsf1	79	91.837	Microtus_ochrogaster
ENSCJAG00000008111	-	86	83.420	ENSMMOG00000014354	srsf1a	83	81.347	Mola_mola
ENSCJAG00000008111	-	82	86.486	ENSMODG00000014781	-	63	89.674	Monodelphis_domestica
ENSCJAG00000008111	-	90	72.414	ENSMALG00000007763	-	79	75.510	Monopterus_albus
ENSCJAG00000008111	-	86	84.974	ENSMALG00000017129	-	75	82.383	Monopterus_albus
ENSCJAG00000008111	-	88	91.371	MGP_CAROLIEiJ_G0016943	Srsf1	94	89.947	Mus_caroli
ENSCJAG00000008111	-	88	91.371	ENSMUSG00000018379	Srsf1	94	89.947	Mus_musculus
ENSCJAG00000008111	-	88	91.371	MGP_PahariEiJ_G0018074	Srsf1	79	91.837	Mus_pahari
ENSCJAG00000008111	-	88	91.371	MGP_SPRETEiJ_G0017790	Srsf1	94	89.947	Mus_spretus
ENSCJAG00000008111	-	88	91.371	ENSMPUG00000015369	SRSF1	79	91.837	Mustela_putorius_furo
ENSCJAG00000008111	-	88	91.371	ENSMLUG00000011040	SRSF1	79	91.837	Myotis_lucifugus
ENSCJAG00000008111	-	90	80.296	ENSMLUG00000023995	-	79	83.163	Myotis_lucifugus
ENSCJAG00000008111	-	88	91.371	ENSNGAG00000011395	Srsf1	79	91.837	Nannospalax_galili
ENSCJAG00000008111	-	99	75.000	ENSNBRG00000008041	srsf1b	88	73.953	Neolamprologus_brichardi
ENSCJAG00000008111	-	88	91.371	ENSNLEG00000008088	-	97	87.324	Nomascus_leucogenys
ENSCJAG00000008111	-	56	82.677	ENSMEUG00000002783	-	99	87.302	Notamacropus_eugenii
ENSCJAG00000008111	-	59	92.424	ENSOPRG00000001234	-	72	92.424	Ochotona_princeps
ENSCJAG00000008111	-	88	91.878	ENSODEG00000011481	-	79	91.878	Octodon_degus
ENSCJAG00000008111	-	89	86.500	ENSONIG00000004860	-	80	84.694	Oreochromis_niloticus
ENSCJAG00000008111	-	86	83.420	ENSONIG00000013160	-	77	82.383	Oreochromis_niloticus
ENSCJAG00000008111	-	89	67.500	ENSOCUG00000010894	-	75	68.063	Oryctolagus_cuniculus
ENSCJAG00000008111	-	86	83.938	ENSORLG00000004580	srsf1a	78	82.902	Oryzias_latipes
ENSCJAG00000008111	-	86	83.938	ENSORLG00020009456	srsf1a	83	82.902	Oryzias_latipes_hni
ENSCJAG00000008111	-	86	83.938	ENSORLG00015014384	srsf1a	83	82.902	Oryzias_latipes_hsok
ENSCJAG00000008111	-	78	82.955	ENSOMEG00000004106	srsf1a	71	81.250	Oryzias_melastigma
ENSCJAG00000008111	-	92	91.787	ENSOGAG00000025950	-	79	91.837	Otolemur_garnettii
ENSCJAG00000008111	-	88	84.772	ENSOARG00000008323	SRSF1	78	85.714	Ovis_aries
ENSCJAG00000008111	-	88	91.371	ENSPPAG00000043403	-	97	87.324	Pan_paniscus
ENSCJAG00000008111	-	88	91.371	ENSPPRG00000004238	-	92	91.351	Panthera_pardus
ENSCJAG00000008111	-	88	91.371	ENSPTRG00000049077	SRSF1	97	87.324	Pan_troglodytes
ENSCJAG00000008111	-	88	91.371	ENSPANG00000022305	-	97	87.324	Papio_anubis
ENSCJAG00000008111	-	87	68.367	ENSPANG00000030275	-	74	67.179	Papio_anubis
ENSCJAG00000008111	-	86	86.082	ENSPKIG00000007204	srsf1a	83	86.010	Paramormyrops_kingsleyae
ENSCJAG00000008111	-	88	86.802	ENSPKIG00000012857	srsf1b	80	85.714	Paramormyrops_kingsleyae
ENSCJAG00000008111	-	88	84.422	ENSPSIG00000009000	-	79	85.204	Pelodiscus_sinensis
ENSCJAG00000008111	-	87	79.592	ENSPMGG00000005467	-	77	79.348	Periophthalmus_magnuspinnatus
ENSCJAG00000008111	-	86	81.865	ENSPMGG00000013112	-	79	83.333	Periophthalmus_magnuspinnatus
ENSCJAG00000008111	-	88	91.371	ENSPEMG00000021416	Srsf1	79	91.837	Peromyscus_maniculatus_bairdii
ENSCJAG00000008111	-	88	86.869	ENSPCIG00000006076	-	79	89.848	Phascolarctos_cinereus
ENSCJAG00000008111	-	88	82.828	ENSPFOG00000018325	-	70	82.474	Poecilia_formosa
ENSCJAG00000008111	-	88	82.828	ENSPLAG00000008416	srsf1b	79	82.474	Poecilia_latipinna
ENSCJAG00000008111	-	88	82.828	ENSPMEG00000002388	-	79	82.474	Poecilia_mexicana
ENSCJAG00000008111	-	55	79.675	ENSPMEG00000014312	-	98	79.675	Poecilia_mexicana
ENSCJAG00000008111	-	55	79.675	ENSPMEG00000020607	-	98	79.675	Poecilia_mexicana
ENSCJAG00000008111	-	86	83.938	ENSPREG00000009667	srsf1a	78	82.902	Poecilia_reticulata
ENSCJAG00000008111	-	88	91.371	ENSPPYG00000008240	SRSF1	79	91.837	Pongo_abelii
ENSCJAG00000008111	-	88	91.371	ENSPCAG00000005199	SRSF1	79	91.837	Procavia_capensis
ENSCJAG00000008111	-	88	91.371	ENSPCOG00000023654	-	97	87.324	Propithecus_coquereli
ENSCJAG00000008111	-	88	69.697	ENSPCOG00000025736	-	94	69.231	Propithecus_coquereli
ENSCJAG00000008111	-	60	94.286	ENSPVAG00000000519	-	54	94.286	Pteropus_vampyrus
ENSCJAG00000008111	-	88	84.772	ENSPNAG00000014601	srsf1b	79	83.673	Pygocentrus_nattereri
ENSCJAG00000008111	-	86	86.082	ENSPNAG00000022241	srsf1a	78	84.536	Pygocentrus_nattereri
ENSCJAG00000008111	-	88	91.371	ENSRNOG00000050323	Srsf1	79	91.837	Rattus_norvegicus
ENSCJAG00000008111	-	88	91.371	ENSRBIG00000034445	-	97	87.324	Rhinopithecus_bieti
ENSCJAG00000008111	-	88	91.371	ENSRROG00000041506	-	97	87.324	Rhinopithecus_roxellana
ENSCJAG00000008111	-	88	91.371	ENSSBOG00000025377	-	97	87.324	Saimiri_boliviensis_boliviensis
ENSCJAG00000008111	-	88	86.869	ENSSHAG00000002552	-	79	89.848	Sarcophilus_harrisii
ENSCJAG00000008111	-	88	87.817	ENSSFOG00015004800	srsf1a	79	86.294	Scleropages_formosus
ENSCJAG00000008111	-	86	82.383	ENSSMAG00000007018	-	78	81.347	Scophthalmus_maximus
ENSCJAG00000008111	-	88	80.392	ENSSMAG00000009719	-	80	79.310	Scophthalmus_maximus
ENSCJAG00000008111	-	86	82.902	ENSSDUG00000011303	-	83	81.865	Seriola_dumerili
ENSCJAG00000008111	-	88	76.238	ENSSDUG00000003929	-	82	78.173	Seriola_dumerili
ENSCJAG00000008111	-	82	77.297	ENSSLDG00000016895	-	76	78.022	Seriola_lalandi_dorsalis
ENSCJAG00000008111	-	88	75.758	ENSSLDG00000016868	-	77	76.142	Seriola_lalandi_dorsalis
ENSCJAG00000008111	-	86	82.902	ENSSLDG00000010543	-	78	81.865	Seriola_lalandi_dorsalis
ENSCJAG00000008111	-	82	91.304	ENSSARG00000010949	-	63	91.803	Sorex_araneus
ENSCJAG00000008111	-	88	89.848	ENSSPUG00000000804	-	95	88.360	Sphenodon_punctatus
ENSCJAG00000008111	-	88	81.340	ENSSPAG00000014152	-	81	81.250	Stegastes_partitus
ENSCJAG00000008111	-	86	84.456	ENSSPAG00000022562	-	78	82.383	Stegastes_partitus
ENSCJAG00000008111	-	88	91.371	ENSSSCG00000017626	-	79	91.837	Sus_scrofa
ENSCJAG00000008111	-	59	90.226	ENSTGUG00000008416	-	72	90.226	Taeniopygia_guttata
ENSCJAG00000008111	-	86	82.902	ENSTRUG00000003691	srsf1a	78	81.865	Takifugu_rubripes
ENSCJAG00000008111	-	86	82.902	ENSTNIG00000016223	srsf1a	77	81.865	Tetraodon_nigroviridis
ENSCJAG00000008111	-	82	90.217	ENSTBEG00000015378	-	63	90.710	Tupaia_belangeri
ENSCJAG00000008111	-	59	92.424	ENSTTRG00000007310	SRSF1	72	92.424	Tursiops_truncatus
ENSCJAG00000008111	-	88	91.371	ENSUAMG00000009858	SRSF1	79	91.837	Ursus_americanus
ENSCJAG00000008111	-	88	91.371	ENSUMAG00000000455	-	77	91.837	Ursus_maritimus
ENSCJAG00000008111	-	88	90.863	ENSVPAG00000010094	SRSF1	79	91.327	Vicugna_pacos
ENSCJAG00000008111	-	88	91.371	ENSVVUG00000011882	-	77	91.837	Vulpes_vulpes
ENSCJAG00000008111	-	88	83.756	ENSXETG00000008954	srsf1	81	79.535	Xenopus_tropicalis
ENSCJAG00000008111	-	86	83.938	ENSXMAG00000011766	srsf1a	78	82.902	Xiphophorus_maculatus