EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000008482 (Gene tree)
Gene ID: 100389820
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 17645 bases
Position: chrNTIC01038834.1:80605308-80622952
Accession: 100389820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000015677	RRM_1	PF00076.22	6.1e-35	1	2
ENSCJAP00000015677	RRM_1	PF00076.22	6.1e-35	2	2
ENSCJAP00000015676	RRM_1	PF00076.22	7.8e-35	1	2
ENSCJAP00000015676	RRM_1	PF00076.22	7.8e-35	2	2
ENSCJAP00000015678	RRM_1	PF00076.22	8.5e-35	1	2
ENSCJAP00000015678	RRM_1	PF00076.22	8.5e-35	2	2
ENSCJAP00000015671	RRM_1	PF00076.22	9.4e-35	1	2
ENSCJAP00000015671	RRM_1	PF00076.22	9.4e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000016564	RBM23-204	1218	-	ENSCJAP00000015677	405 (aa)	-	F7GP44
ENSCJAT00000016565	RBM23-202	1649	-	ENSCJAP00000015678	450 (aa)	-	F7GP41
ENSCJAT00000016563	RBM23-203	1616	XM_009005739	ENSCJAP00000015676	439 (aa)	XP_009003987	F7GP46
ENSCJAT00000016558	RBM23-201	1697	-	ENSCJAP00000015671	466 (aa)	-	F7GP57

Gene Model

Click here to download ENSCJAG00000008482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000008482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000008482	RBM23	53	31.298	ENSCJAG00000019682	TIAL1	80	32.061
ENSCJAG00000008482	RBM23	98	56.103	ENSCJAG00000017535	RBM39	74	69.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000008482	RBM23	100	92.857	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSCJAG00000008482	RBM23	100	84.701	ENSAMEG00000007322	RBM23	100	87.583	Ailuropoda_melanoleuca
ENSCJAG00000008482	RBM23	78	76.524	ENSACAG00000001569	RBM23	96	67.396	Anolis_carolinensis
ENSCJAG00000008482	RBM23	100	75.854	ENSANAG00000033790	-	100	74.260	Aotus_nancymaae
ENSCJAG00000008482	RBM23	100	84.233	ENSBTAG00000038333	RBM23	100	85.529	Bos_taurus
ENSCJAG00000008482	RBM23	100	79.739	ENSCAFG00000011217	RBM23	100	81.917	Canis_familiaris
ENSCJAG00000008482	RBM23	100	86.547	ENSCAFG00020007711	RBM23	100	88.565	Canis_lupus_dingo
ENSCJAG00000008482	RBM23	100	85.745	ENSCHIG00000025709	RBM23	100	85.313	Capra_hircus
ENSCJAG00000008482	RBM23	100	87.500	ENSTSYG00000014755	RBM23	100	95.926	Carlito_syrichta
ENSCJAG00000008482	RBM23	100	78.132	ENSCCAG00000028584	-	100	80.741	Cebus_capucinus
ENSCJAG00000008482	RBM23	100	94.989	ENSCCAG00000025114	-	100	95.444	Cebus_capucinus
ENSCJAG00000008482	RBM23	100	91.646	ENSCATG00000017832	RBM23	100	94.182	Cercocebus_atys
ENSCJAG00000008482	RBM23	100	89.819	ENSCSAG00000016213	RBM23	100	91.403	Chlorocebus_sabaeus
ENSCJAG00000008482	RBM23	100	65.541	ENSCPBG00000026096	RBM23	96	68.090	Chrysemys_picta_bellii
ENSCJAG00000008482	RBM23	95	91.169	ENSCANG00000001893	RBM23	100	91.688	Colobus_angolensis_palliatus
ENSCJAG00000008482	RBM23	100	86.067	ENSDNOG00000032457	RBM23	100	86.966	Dasypus_novemcinctus
ENSCJAG00000008482	RBM23	67	95.926	ENSDORG00000004926	-	100	95.926	Dipodomys_ordii
ENSCJAG00000008482	RBM23	54	80.000	ENSETEG00000017915	-	93	80.000	Echinops_telfairi
ENSCJAG00000008482	RBM23	96	83.759	ENSEASG00005011696	RBM23	95	86.079	Equus_asinus_asinus
ENSCJAG00000008482	RBM23	100	82.326	ENSECAG00000009910	RBM23	100	84.651	Equus_caballus
ENSCJAG00000008482	RBM23	100	82.183	ENSEEUG00000015560	RBM23	100	82.960	Erinaceus_europaeus
ENSCJAG00000008482	RBM23	100	84.753	ENSFCAG00000006632	RBM23	100	87.444	Felis_catus
ENSCJAG00000008482	RBM23	100	91.872	ENSGGOG00000015707	RBM23	100	93.596	Gorilla_gorilla
ENSCJAG00000008482	RBM23	100	81.124	ENSHGLG00100006114	RBM23	99	82.247	Heterocephalus_glaber_male
ENSCJAG00000008482	RBM23	67	95.556	ENSSTOG00000010354	RBM23	100	95.556	Ictidomys_tridecemlineatus
ENSCJAG00000008482	RBM23	100	84.598	ENSLAFG00000018567	RBM23	100	83.259	Loxodonta_africana
ENSCJAG00000008482	RBM23	100	91.629	ENSMFAG00000037595	RBM23	100	92.081	Macaca_fascicularis
ENSCJAG00000008482	RBM23	100	91.629	ENSMMUG00000018381	RBM23	100	92.081	Macaca_mulatta
ENSCJAG00000008482	RBM23	100	91.156	ENSMNEG00000042442	RBM23	100	91.610	Macaca_nemestrina
ENSCJAG00000008482	RBM23	100	84.075	ENSMLEG00000039954	RBM23	100	84.543	Mandrillus_leucophaeus
ENSCJAG00000008482	RBM23	100	85.268	ENSMICG00000006364	RBM23	100	94.074	Microcebus_murinus
ENSCJAG00000008482	RBM23	71	89.905	ENSMODG00000024448	RBM23	100	85.495	Monodelphis_domestica
ENSCJAG00000008482	RBM23	100	86.966	ENSMPUG00000007151	RBM23	100	87.865	Mustela_putorius_furo
ENSCJAG00000008482	RBM23	100	82.273	ENSMLUG00000012923	RBM23	100	82.045	Myotis_lucifugus
ENSCJAG00000008482	RBM23	100	92.647	ENSNLEG00000014792	RBM23	100	92.157	Nomascus_leucogenys
ENSCJAG00000008482	RBM23	58	97.143	ENSMEUG00000014548	-	53	97.143	Notamacropus_eugenii
ENSCJAG00000008482	RBM23	72	84.161	ENSOPRG00000001092	RBM23	100	85.843	Ochotona_princeps
ENSCJAG00000008482	RBM23	71	90.102	ENSOCUG00000002006	RBM23	100	88.591	Oryctolagus_cuniculus
ENSCJAG00000008482	RBM23	99	76.974	ENSOGAG00000014794	RBM23	100	77.944	Otolemur_garnettii
ENSCJAG00000008482	RBM23	100	84.881	ENSOARG00000019398	RBM23	100	84.449	Ovis_aries
ENSCJAG00000008482	RBM23	100	93.213	ENSPPAG00000037922	RBM23	100	92.760	Pan_paniscus
ENSCJAG00000008482	RBM23	100	84.529	ENSPPRG00000023344	RBM23	100	87.444	Panthera_pardus
ENSCJAG00000008482	RBM23	73	94.000	ENSPTIG00000007831	RBM23	100	86.323	Panthera_tigris_altaica
ENSCJAG00000008482	RBM23	100	92.647	ENSPTRG00000006151	RBM23	100	93.137	Pan_troglodytes
ENSCJAG00000008482	RBM23	97	87.646	ENSPANG00000001324	RBM23	100	95.221	Papio_anubis
ENSCJAG00000008482	RBM23	71	89.905	ENSPCIG00000027773	RBM23	100	84.314	Phascolarctos_cinereus
ENSCJAG00000008482	RBM23	100	88.208	ENSPPYG00000005649	RBM23	100	89.623	Pongo_abelii
ENSCJAG00000008482	RBM23	100	65.766	ENSPCAG00000006669	RBM23	100	64.640	Procavia_capensis
ENSCJAG00000008482	RBM23	100	86.384	ENSPCOG00000018564	RBM23	100	95.556	Propithecus_coquereli
ENSCJAG00000008482	RBM23	100	86.771	ENSPVAG00000013785	RBM23	100	86.771	Pteropus_vampyrus
ENSCJAG00000008482	RBM23	100	90.950	ENSRBIG00000039276	RBM23	100	91.176	Rhinopithecus_bieti
ENSCJAG00000008482	RBM23	100	90.950	ENSRROG00000044026	RBM23	100	91.176	Rhinopithecus_roxellana
ENSCJAG00000008482	RBM23	100	96.141	ENSSBOG00000023037	-	100	96.141	Saimiri_boliviensis_boliviensis
ENSCJAG00000008482	RBM23	97	70.726	ENSSBOG00000034977	-	99	69.555	Saimiri_boliviensis_boliviensis
ENSCJAG00000008482	RBM23	71	89.905	ENSSHAG00000012932	RBM23	100	84.532	Sarcophilus_harrisii
ENSCJAG00000008482	RBM23	100	85.202	ENSSARG00000005165	RBM23	100	87.668	Sorex_araneus
ENSCJAG00000008482	RBM23	100	67.281	ENSSPUG00000000489	RBM23	96	69.111	Sphenodon_punctatus
ENSCJAG00000008482	RBM23	100	84.410	ENSSSCG00000026700	RBM23	100	85.135	Sus_scrofa
ENSCJAG00000008482	RBM23	100	82.119	ENSTBEG00000011543	RBM23	100	82.561	Tupaia_belangeri
ENSCJAG00000008482	RBM23	100	81.473	ENSTTRG00000001500	RBM23	100	83.632	Tursiops_truncatus
ENSCJAG00000008482	RBM23	100	85.906	ENSUAMG00000008524	RBM23	100	88.591	Ursus_americanus
ENSCJAG00000008482	RBM23	100	85.906	ENSUMAG00000014075	RBM23	100	88.591	Ursus_maritimus
ENSCJAG00000008482	RBM23	100	86.547	ENSVVUG00000019815	RBM23	100	88.565	Vulpes_vulpes
ENSCJAG00000008482	RBM23	73	75.329	ENSXETG00000022623	rbm23	100	65.929	Xenopus_tropicalis