EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000008494 (Gene tree)
Gene ID: 100400534
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 24123 bases
Position: chrNTIC01036611.1:144123080-144147202
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000015718	NOG1	PF06858.14	4.4e-26	1	1
ENSCJAP00000015718	MMR_HSR1	PF01926.23	1.5e-18	1	1
ENSCJAP00000015718	NOGCT	PF08155.11	8.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000016607	-	1911	-	ENSCJAP00000015718	636 (aa)	-	U3FSH7

Gene Model

Click here to download ENSCJAG00000008494's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000008494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000008494	-	100	98.270	ENSCJAG00000022962	-	100	98.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000008494	-	100	97.642	ENSG00000107937	GTPBP4	100	100.000	Homo_sapiens
ENSCJAG00000008494	-	100	82.704	ENSAPOG00000020433	gtpbp4	100	78.807	Acanthochromis_polyacanthus
ENSCJAG00000008494	-	100	93.082	ENSAMEG00000001845	GTPBP4	100	92.767	Ailuropoda_melanoleuca
ENSCJAG00000008494	-	100	78.931	ENSACIG00000018629	gtpbp4	100	78.774	Amphilophus_citrinellus
ENSCJAG00000008494	-	100	83.019	ENSAOCG00000000427	gtpbp4	93	82.862	Amphiprion_ocellaris
ENSCJAG00000008494	-	100	83.176	ENSAPEG00000002544	gtpbp4	100	83.019	Amphiprion_percula
ENSCJAG00000008494	-	100	83.491	ENSATEG00000012635	gtpbp4	95	83.333	Anabas_testudineus
ENSCJAG00000008494	-	52	79.279	ENSAPLG00000013790	-	100	79.279	Anas_platyrhynchos
ENSCJAG00000008494	-	100	84.748	ENSACAG00000002943	GTPBP4	100	84.591	Anolis_carolinensis
ENSCJAG00000008494	-	87	93.931	ENSANAG00000029209	-	100	93.931	Aotus_nancymaae
ENSCJAG00000008494	-	99	85.443	ENSANAG00000022188	-	99	85.285	Aotus_nancymaae
ENSCJAG00000008494	-	70	86.830	ENSACLG00000026330	gtpbp4	92	92.667	Astatotilapia_calliptera
ENSCJAG00000008494	-	100	82.862	ENSAMXG00000019771	gtpbp4	100	82.704	Astyanax_mexicanus
ENSCJAG00000008494	-	100	94.025	ENSBTAG00000014917	GTPBP4	100	93.711	Bos_taurus
ENSCJAG00000008494	-	99	52.984	WBGene00020297	nog-1	99	52.074	Caenorhabditis_elegans
ENSCJAG00000008494	-	93	94.397	ENSCAFG00000005536	GTPBP4	100	94.058	Canis_familiaris
ENSCJAG00000008494	-	100	94.654	ENSCAFG00020004307	GTPBP4	100	94.340	Canis_lupus_dingo
ENSCJAG00000008494	-	100	93.868	ENSCHIG00000018346	GTPBP4	100	93.553	Capra_hircus
ENSCJAG00000008494	-	100	95.440	ENSTSYG00000004977	GTPBP4	100	94.811	Carlito_syrichta
ENSCJAG00000008494	-	99	83.204	ENSCAPG00000002134	GTPBP4	99	82.737	Cavia_aperea
ENSCJAG00000008494	-	100	95.126	ENSCPOG00000013736	GTPBP4	100	94.654	Cavia_porcellus
ENSCJAG00000008494	-	100	74.843	ENSCCAG00000030115	-	100	74.057	Cebus_capucinus
ENSCJAG00000008494	-	99	98.420	ENSCCAG00000021627	-	92	98.420	Cebus_capucinus
ENSCJAG00000008494	-	100	98.113	ENSCATG00000004303	GTPBP4	100	98.113	Cercocebus_atys
ENSCJAG00000008494	-	100	95.126	ENSCLAG00000011323	GTPBP4	100	94.654	Chinchilla_lanigera
ENSCJAG00000008494	-	100	98.270	ENSCSAG00000014097	GTPBP4	100	98.270	Chlorocebus_sabaeus
ENSCJAG00000008494	-	96	96.496	ENSCHOG00000012602	GTPBP4	88	96.496	Choloepus_hoffmanni
ENSCJAG00000008494	-	100	86.635	ENSCPBG00000008398	GTPBP4	100	86.321	Chrysemys_picta_bellii
ENSCJAG00000008494	-	100	63.509	ENSCING00000001957	-	100	63.975	Ciona_intestinalis
ENSCJAG00000008494	-	100	63.077	ENSCSAVG00000009793	-	99	78.502	Ciona_savignyi
ENSCJAG00000008494	-	100	93.427	ENSCANG00000014168	GTPBP4	100	92.801	Colobus_angolensis_palliatus
ENSCJAG00000008494	-	100	96.226	ENSCGRG00001013765	Gtpbp4	100	96.226	Cricetulus_griseus_chok1gshd
ENSCJAG00000008494	-	100	96.226	ENSCGRG00000012171	Gtpbp4	100	96.226	Cricetulus_griseus_crigri
ENSCJAG00000008494	-	100	78.145	ENSCSEG00000007352	gtpbp4	100	77.987	Cynoglossus_semilaevis
ENSCJAG00000008494	-	100	81.447	ENSCVAG00000008993	gtpbp4	100	81.289	Cyprinodon_variegatus
ENSCJAG00000008494	-	100	82.075	ENSDARG00000018961	gtpbp4	100	81.918	Danio_rerio
ENSCJAG00000008494	-	67	93.911	ENSDNOG00000006746	GTPBP4	100	92.974	Dasypus_novemcinctus
ENSCJAG00000008494	-	83	100.000	ENSDORG00000010884	Gtpbp4	96	100.000	Dipodomys_ordii
ENSCJAG00000008494	-	100	59.604	FBgn0028473	Non1	100	58.752	Drosophila_melanogaster
ENSCJAG00000008494	-	74	91.000	ENSETEG00000016840	-	71	87.000	Echinops_telfairi
ENSCJAG00000008494	-	98	63.376	ENSEBUG00000010311	gtpbp4	99	62.898	Eptatretus_burgeri
ENSCJAG00000008494	-	100	95.283	ENSEASG00005019082	GTPBP4	100	94.654	Equus_asinus_asinus
ENSCJAG00000008494	-	100	95.283	ENSECAG00000001700	GTPBP4	100	94.654	Equus_caballus
ENSCJAG00000008494	-	100	93.261	ENSEEUG00000009889	GTPBP4	91	93.261	Erinaceus_europaeus
ENSCJAG00000008494	-	100	81.348	ENSELUG00000008578	gtpbp4	96	81.664	Esox_lucius
ENSCJAG00000008494	-	100	94.811	ENSFCAG00000026213	GTPBP4	100	94.497	Felis_catus
ENSCJAG00000008494	-	99	84.834	ENSFALG00000006971	GTPBP4	87	86.478	Ficedula_albicollis
ENSCJAG00000008494	-	100	95.440	ENSFDAG00000000998	GTPBP4	100	94.969	Fukomys_damarensis
ENSCJAG00000008494	-	100	82.547	ENSFHEG00000012922	gtpbp4	100	82.390	Fundulus_heteroclitus
ENSCJAG00000008494	-	100	81.289	ENSGMOG00000016090	gtpbp4	100	81.132	Gadus_morhua
ENSCJAG00000008494	-	100	85.849	ENSGALG00000006703	GTPBP4	100	85.849	Gallus_gallus
ENSCJAG00000008494	-	100	82.862	ENSGAFG00000002075	gtpbp4	100	82.704	Gambusia_affinis
ENSCJAG00000008494	-	100	81.761	ENSGACG00000017481	gtpbp4	100	81.604	Gasterosteus_aculeatus
ENSCJAG00000008494	-	93	86.927	ENSGAGG00000018689	GTPBP4	100	86.587	Gopherus_agassizii
ENSCJAG00000008494	-	100	97.799	ENSGGOG00000013372	GTPBP4	100	97.799	Gorilla_gorilla
ENSCJAG00000008494	-	100	83.333	ENSHBUG00000000192	gtpbp4	100	83.176	Haplochromis_burtoni
ENSCJAG00000008494	-	100	95.283	ENSHGLG00000013071	GTPBP4	100	94.811	Heterocephalus_glaber_female
ENSCJAG00000008494	-	100	95.283	ENSHGLG00100017850	GTPBP4	100	94.811	Heterocephalus_glaber_male
ENSCJAG00000008494	-	100	87.127	ENSHGLG00100002964	-	100	86.813	Heterocephalus_glaber_male
ENSCJAG00000008494	-	100	82.889	ENSHCOG00000011543	gtpbp4	100	82.732	Hippocampus_comes
ENSCJAG00000008494	-	100	83.176	ENSIPUG00000014417	GTPBP4	100	83.019	Ictalurus_punctatus
ENSCJAG00000008494	-	100	95.755	ENSSTOG00000010042	-	100	95.755	Ictidomys_tridecemlineatus
ENSCJAG00000008494	-	100	86.950	ENSSTOG00000023023	-	100	86.321	Ictidomys_tridecemlineatus
ENSCJAG00000008494	-	100	93.868	ENSJJAG00000010021	Gtpbp4	100	93.553	Jaculus_jaculus
ENSCJAG00000008494	-	100	80.818	ENSKMAG00000021705	gtpbp4	100	80.660	Kryptolebias_marmoratus
ENSCJAG00000008494	-	100	77.708	ENSLBEG00000021419	gtpbp4	100	81.017	Labrus_bergylta
ENSCJAG00000008494	-	100	83.805	ENSLACG00000001449	GTPBP4	100	83.648	Latimeria_chalumnae
ENSCJAG00000008494	-	100	81.595	ENSLOCG00000012279	gtpbp4	100	81.442	Lepisosteus_oculatus
ENSCJAG00000008494	-	100	94.497	ENSLAFG00000018578	GTPBP4	100	94.025	Loxodonta_africana
ENSCJAG00000008494	-	100	97.799	ENSMFAG00000046251	GTPBP4	100	97.799	Macaca_fascicularis
ENSCJAG00000008494	-	100	94.969	ENSMMUG00000010813	GTPBP4	100	94.969	Macaca_mulatta
ENSCJAG00000008494	-	100	97.956	ENSMNEG00000044366	GTPBP4	100	97.956	Macaca_nemestrina
ENSCJAG00000008494	-	100	97.799	ENSMLEG00000039605	GTPBP4	100	97.799	Mandrillus_leucophaeus
ENSCJAG00000008494	-	100	83.491	ENSMAMG00000013763	gtpbp4	92	83.333	Mastacembelus_armatus
ENSCJAG00000008494	-	100	83.491	ENSMZEG00005006621	gtpbp4	100	83.333	Maylandia_zebra
ENSCJAG00000008494	-	100	95.755	ENSMAUG00000000571	Gtpbp4	100	95.283	Mesocricetus_auratus
ENSCJAG00000008494	-	100	95.912	ENSMICG00000013332	GTPBP4	100	95.912	Microcebus_murinus
ENSCJAG00000008494	-	100	95.912	ENSMOCG00000002209	Gtpbp4	100	95.283	Microtus_ochrogaster
ENSCJAG00000008494	-	100	79.403	ENSMMOG00000011257	gtpbp4	100	79.245	Mola_mola
ENSCJAG00000008494	-	100	90.252	ENSMODG00000005978	GTPBP4	100	90.409	Monodelphis_domestica
ENSCJAG00000008494	-	100	82.075	ENSMALG00000012488	gtpbp4	100	81.918	Monopterus_albus
ENSCJAG00000008494	-	99	94.322	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	94.224	Mus_caroli
ENSCJAG00000008494	-	100	95.755	ENSMUSG00000021149	Gtpbp4	100	95.283	Mus_musculus
ENSCJAG00000008494	-	100	95.597	MGP_PahariEiJ_G0019265	Gtpbp4	100	95.126	Mus_pahari
ENSCJAG00000008494	-	99	95.584	MGP_SPRETEiJ_G0019073	Gtpbp4	100	95.110	Mus_spretus
ENSCJAG00000008494	-	93	93.039	ENSMPUG00000016221	GTPBP4	100	92.530	Mustela_putorius_furo
ENSCJAG00000008494	-	100	93.868	ENSMLUG00000028192	GTPBP4	100	93.553	Myotis_lucifugus
ENSCJAG00000008494	-	100	94.497	ENSNGAG00000015364	Gtpbp4	100	94.497	Nannospalax_galili
ENSCJAG00000008494	-	87	82.222	ENSNBRG00000019965	gtpbp4	86	82.222	Neolamprologus_brichardi
ENSCJAG00000008494	-	100	98.428	ENSNLEG00000013495	GTPBP4	100	98.428	Nomascus_leucogenys
ENSCJAG00000008494	-	64	90.909	ENSMEUG00000016215	-	67	93.750	Notamacropus_eugenii
ENSCJAG00000008494	-	89	97.305	ENSOPRG00000008671	GTPBP4	86	97.305	Ochotona_princeps
ENSCJAG00000008494	-	100	93.868	ENSODEG00000019152	-	100	93.396	Octodon_degus
ENSCJAG00000008494	-	100	95.912	ENSODEG00000000962	-	100	95.912	Octodon_degus
ENSCJAG00000008494	-	100	83.491	ENSONIG00000017707	gtpbp4	100	83.333	Oreochromis_niloticus
ENSCJAG00000008494	-	99	87.421	ENSOANG00000006095	-	99	87.579	Ornithorhynchus_anatinus
ENSCJAG00000008494	-	59	87.071	ENSOCUG00000014716	-	100	87.071	Oryctolagus_cuniculus
ENSCJAG00000008494	-	100	94.025	ENSOCUG00000016120	-	100	93.711	Oryctolagus_cuniculus
ENSCJAG00000008494	-	100	81.604	ENSORLG00000006151	gtpbp4	100	81.447	Oryzias_latipes
ENSCJAG00000008494	-	100	81.604	ENSORLG00020020899	gtpbp4	100	81.447	Oryzias_latipes_hni
ENSCJAG00000008494	-	100	81.447	ENSORLG00015020562	gtpbp4	100	81.289	Oryzias_latipes_hsok
ENSCJAG00000008494	-	100	81.918	ENSOMEG00000019684	gtpbp4	100	81.604	Oryzias_melastigma
ENSCJAG00000008494	-	100	96.541	ENSOGAG00000011941	GTPBP4	100	96.541	Otolemur_garnettii
ENSCJAG00000008494	-	100	93.584	ENSOARG00000015047	GTPBP4	100	93.114	Ovis_aries
ENSCJAG00000008494	-	100	97.799	ENSPPAG00000042066	GTPBP4	100	97.799	Pan_paniscus
ENSCJAG00000008494	-	100	94.969	ENSPPRG00000009895	GTPBP4	100	94.654	Panthera_pardus
ENSCJAG00000008494	-	100	94.969	ENSPTIG00000008569	GTPBP4	100	94.654	Panthera_tigris_altaica
ENSCJAG00000008494	-	71	97.792	ENSPTRG00000002236	GTPBP4	87	97.792	Pan_troglodytes
ENSCJAG00000008494	-	100	97.956	ENSPANG00000023543	GTPBP4	100	97.956	Papio_anubis
ENSCJAG00000008494	-	100	82.233	ENSPKIG00000012301	gtpbp4	100	82.233	Paramormyrops_kingsleyae
ENSCJAG00000008494	-	56	91.317	ENSPSIG00000005442	GTPBP4	93	91.317	Pelodiscus_sinensis
ENSCJAG00000008494	-	100	79.088	ENSPMGG00000001462	gtpbp4	100	78.931	Periophthalmus_magnuspinnatus
ENSCJAG00000008494	-	100	95.440	ENSPEMG00000015091	-	100	94.969	Peromyscus_maniculatus_bairdii
ENSCJAG00000008494	-	100	70.755	ENSPEMG00000012279	-	100	70.283	Peromyscus_maniculatus_bairdii
ENSCJAG00000008494	-	100	75.472	ENSPMAG00000000905	gtpbp4	100	75.472	Petromyzon_marinus
ENSCJAG00000008494	-	100	90.094	ENSPCIG00000026082	GTPBP4	100	90.252	Phascolarctos_cinereus
ENSCJAG00000008494	-	100	82.862	ENSPFOG00000000026	gtpbp4	100	82.704	Poecilia_formosa
ENSCJAG00000008494	-	92	83.475	ENSPLAG00000002898	gtpbp4	97	83.305	Poecilia_latipinna
ENSCJAG00000008494	-	100	83.019	ENSPMEG00000016422	gtpbp4	100	82.862	Poecilia_mexicana
ENSCJAG00000008494	-	100	79.088	ENSPREG00000019870	gtpbp4	100	78.931	Poecilia_reticulata
ENSCJAG00000008494	-	100	98.270	ENSPPYG00000002037	GTPBP4	100	98.270	Pongo_abelii
ENSCJAG00000008494	-	100	91.195	ENSPCOG00000014382	-	100	90.566	Propithecus_coquereli
ENSCJAG00000008494	-	97	90.113	ENSPCOG00000014602	-	100	89.303	Propithecus_coquereli
ENSCJAG00000008494	-	92	95.283	ENSPVAG00000005882	GTPBP4	86	95.283	Pteropus_vampyrus
ENSCJAG00000008494	-	100	74.057	ENSPNYG00000024251	gtpbp4	100	73.899	Pundamilia_nyererei
ENSCJAG00000008494	-	100	83.491	ENSPNAG00000019977	gtpbp4	100	83.333	Pygocentrus_nattereri
ENSCJAG00000008494	-	100	95.597	ENSRNOG00000016217	Gtpbp4	100	95.597	Rattus_norvegicus
ENSCJAG00000008494	-	100	97.484	ENSRBIG00000028875	GTPBP4	100	97.484	Rhinopithecus_bieti
ENSCJAG00000008494	-	100	97.484	ENSRROG00000030798	GTPBP4	100	97.484	Rhinopithecus_roxellana
ENSCJAG00000008494	-	99	46.626	YPL093W	-	99	45.399	Saccharomyces_cerevisiae
ENSCJAG00000008494	-	100	98.585	ENSSBOG00000028421	GTPBP4	100	98.585	Saimiri_boliviensis_boliviensis
ENSCJAG00000008494	-	99	89.841	ENSSHAG00000014713	GTPBP4	94	89.841	Sarcophilus_harrisii
ENSCJAG00000008494	-	100	83.648	ENSSFOG00015003167	gtpbp4	100	83.491	Scleropages_formosus
ENSCJAG00000008494	-	100	82.390	ENSSMAG00000005863	gtpbp4	100	82.233	Scophthalmus_maximus
ENSCJAG00000008494	-	100	82.233	ENSSDUG00000006534	gtpbp4	100	82.075	Seriola_dumerili
ENSCJAG00000008494	-	100	82.233	ENSSLDG00000020688	gtpbp4	100	82.075	Seriola_lalandi_dorsalis
ENSCJAG00000008494	-	61	99.010	ENSSARG00000003409	-	79	99.010	Sorex_araneus
ENSCJAG00000008494	-	100	86.635	ENSSPUG00000002153	GTPBP4	100	86.164	Sphenodon_punctatus
ENSCJAG00000008494	-	63	72.682	ENSSPAG00000014583	gtpbp4	100	72.431	Stegastes_partitus
ENSCJAG00000008494	-	100	91.824	ENSSSCG00000028602	GTPBP4	100	91.824	Sus_scrofa
ENSCJAG00000008494	-	99	83.968	ENSTGUG00000000820	GTPBP4	100	85.714	Taeniopygia_guttata
ENSCJAG00000008494	-	100	81.761	ENSTRUG00000003900	gtpbp4	100	81.604	Takifugu_rubripes
ENSCJAG00000008494	-	100	83.176	ENSTNIG00000007992	gtpbp4	100	83.019	Tetraodon_nigroviridis
ENSCJAG00000008494	-	100	80.343	ENSTBEG00000003613	GTPBP4	100	79.407	Tupaia_belangeri
ENSCJAG00000008494	-	100	88.629	ENSTTRG00000011163	GTPBP4	100	88.162	Tursiops_truncatus
ENSCJAG00000008494	-	100	93.553	ENSUAMG00000013191	GTPBP4	100	93.239	Ursus_americanus
ENSCJAG00000008494	-	93	92.869	ENSUMAG00000016138	GTPBP4	100	92.530	Ursus_maritimus
ENSCJAG00000008494	-	100	94.340	ENSVVUG00000008608	GTPBP4	98	94.025	Vulpes_vulpes
ENSCJAG00000008494	-	100	73.899	ENSXETG00000018097	gtpbp4	100	75.224	Xenopus_tropicalis
ENSCJAG00000008494	-	100	76.839	ENSXCOG00000019953	gtpbp4	98	76.682	Xiphophorus_couchianus
ENSCJAG00000008494	-	100	82.316	ENSXMAG00000006719	gtpbp4	100	82.160	Xiphophorus_maculatus