EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000008527 (Gene tree)
Gene ID: 100397407
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 96653 bases
Position: chrNTIC01036611.1:104680346-104776998
Accession: 100397407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000015788	RRM_5	PF13893.6	6.7e-07	1	2
ENSCJAP00000015788	RRM_5	PF13893.6	6.7e-07	2	2
ENSCJAP00000015788	RRM_1	PF00076.22	4.3e-43	1	4
ENSCJAP00000015788	RRM_1	PF00076.22	4.3e-43	2	4
ENSCJAP00000015788	RRM_1	PF00076.22	4.3e-43	3	4
ENSCJAP00000015788	RRM_1	PF00076.22	4.3e-43	4	4
ENSCJAP00000046060	RRM_1	PF00076.22	7.7e-33	1	3
ENSCJAP00000046060	RRM_1	PF00076.22	7.7e-33	2	3
ENSCJAP00000046060	RRM_1	PF00076.22	7.7e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000062420	SPEN-202	10728	-	ENSCJAP00000046060	3575 (aa)	-	F6ZBE2
ENSCJAT00000016680	SPEN-201	11028	XM_002750316	ENSCJAP00000015788	3675 (aa)	XP_002750362	F7DBI5

Gene Model

Click here to download ENSCJAG00000008527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000008527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000008527	SPEN	100	95.382	ENSG00000065526	SPEN	99	99.327	Homo_sapiens
ENSCJAG00000008527	SPEN	86	81.461	ENSAPOG00000009853	-	90	74.717	Acanthochromis_polyacanthus
ENSCJAG00000008527	SPEN	77	83.626	ENSAPOG00000011411	si:ch1073-335m2.2	75	79.429	Acanthochromis_polyacanthus
ENSCJAG00000008527	SPEN	100	86.834	ENSAMEG00000011817	SPEN	100	87.027	Ailuropoda_melanoleuca
ENSCJAG00000008527	SPEN	66	77.778	ENSAOCG00000008077	si:ch1073-335m2.2	72	77.778	Amphiprion_ocellaris
ENSCJAG00000008527	SPEN	85	81.461	ENSAOCG00000014505	-	89	49.163	Amphiprion_ocellaris
ENSCJAG00000008527	SPEN	76	83.626	ENSAPEG00000013515	si:ch1073-335m2.2	75	83.626	Amphiprion_percula
ENSCJAG00000008527	SPEN	86	81.461	ENSAPEG00000010288	-	89	48.769	Amphiprion_percula
ENSCJAG00000008527	SPEN	75	84.146	ENSATEG00000007674	si:ch1073-335m2.2	75	84.146	Anabas_testudineus
ENSCJAG00000008527	SPEN	96	82.584	ENSATEG00000005627	-	89	49.896	Anabas_testudineus
ENSCJAG00000008527	SPEN	96	71.652	ENSAPLG00000012618	SPEN	100	71.615	Anas_platyrhynchos
ENSCJAG00000008527	SPEN	96	83.908	ENSACAG00000013761	SPEN	100	84.291	Anolis_carolinensis
ENSCJAG00000008527	SPEN	99	97.520	ENSANAG00000034428	SPEN	99	97.520	Aotus_nancymaae
ENSCJAG00000008527	SPEN	96	81.461	ENSACLG00000016922	-	98	49.490	Astatotilapia_calliptera
ENSCJAG00000008527	SPEN	74	80.000	ENSACLG00000021433	si:ch1073-335m2.2	85	84.211	Astatotilapia_calliptera
ENSCJAG00000008527	SPEN	86	83.240	ENSAMXG00000012485	spen	89	82.065	Astyanax_mexicanus
ENSCJAG00000008527	SPEN	100	86.329	ENSBTAG00000018729	SPEN	100	86.298	Bos_taurus
ENSCJAG00000008527	SPEN	87	85.327	ENSCAFG00000016132	-	96	91.484	Canis_familiaris
ENSCJAG00000008527	SPEN	100	86.410	ENSCHIG00000025070	SPEN	100	86.380	Capra_hircus
ENSCJAG00000008527	SPEN	92	88.484	ENSTSYG00000036016	SPEN	99	88.359	Carlito_syrichta
ENSCJAG00000008527	SPEN	99	80.743	ENSCAPG00000013803	SPEN	100	80.961	Cavia_aperea
ENSCJAG00000008527	SPEN	99	80.989	ENSCPOG00000014036	SPEN	100	81.207	Cavia_porcellus
ENSCJAG00000008527	SPEN	100	93.583	ENSCCAG00000020258	SPEN	99	97.154	Cebus_capucinus
ENSCJAG00000008527	SPEN	95	100.000	ENSCATG00000015079	SPEN	99	99.265	Cercocebus_atys
ENSCJAG00000008527	SPEN	99	81.588	ENSCLAG00000002018	SPEN	99	90.385	Chinchilla_lanigera
ENSCJAG00000008527	SPEN	100	94.715	ENSCSAG00000000841	SPEN	100	94.444	Chlorocebus_sabaeus
ENSCJAG00000008527	SPEN	97	71.846	ENSCPBG00000010477	SPEN	100	71.930	Chrysemys_picta_bellii
ENSCJAG00000008527	SPEN	99	93.078	ENSCANG00000034547	SPEN	99	92.834	Colobus_angolensis_palliatus
ENSCJAG00000008527	SPEN	99	81.182	ENSCGRG00001007725	Spen	100	81.101	Cricetulus_griseus_chok1gshd
ENSCJAG00000008527	SPEN	99	80.169	ENSCGRG00000010581	Spen	100	79.951	Cricetulus_griseus_crigri
ENSCJAG00000008527	SPEN	83	84.270	ENSCSEG00000003915	-	91	51.000	Cynoglossus_semilaevis
ENSCJAG00000008527	SPEN	87	48.384	ENSCVAG00000016346	-	88	49.261	Cyprinodon_variegatus
ENSCJAG00000008527	SPEN	77	84.795	ENSCVAG00000009075	si:ch1073-335m2.2	85	84.795	Cyprinodon_variegatus
ENSCJAG00000008527	SPEN	72	63.454	ENSDARG00000074332	si:ch1073-335m2.2	89	52.698	Danio_rerio
ENSCJAG00000008527	SPEN	96	47.003	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSCJAG00000008527	SPEN	100	86.030	ENSDNOG00000041948	SPEN	100	86.057	Dasypus_novemcinctus
ENSCJAG00000008527	SPEN	99	76.965	ENSDORG00000023909	Spen	99	79.173	Dipodomys_ordii
ENSCJAG00000008527	SPEN	68	97.479	ENSETEG00000016692	-	67	97.479	Echinops_telfairi
ENSCJAG00000008527	SPEN	95	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSCJAG00000008527	SPEN	95	100.000	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSCJAG00000008527	SPEN	73	95.349	ENSEEUG00000010255	SPEN	76	95.349	Erinaceus_europaeus
ENSCJAG00000008527	SPEN	61	81.111	ENSELUG00000007726	si:ch1073-335m2.2	77	81.395	Esox_lucius
ENSCJAG00000008527	SPEN	86	63.607	ENSFALG00000003551	SPEN	100	63.844	Ficedula_albicollis
ENSCJAG00000008527	SPEN	99	81.585	ENSFDAG00000010212	SPEN	100	81.766	Fukomys_damarensis
ENSCJAG00000008527	SPEN	76	78.857	ENSFHEG00000004544	si:ch1073-335m2.2	86	78.857	Fundulus_heteroclitus
ENSCJAG00000008527	SPEN	61	82.635	ENSGMOG00000008156	si:ch1073-335m2.2	64	82.635	Gadus_morhua
ENSCJAG00000008527	SPEN	80	66.265	ENSGMOG00000008397	-	80	79.888	Gadus_morhua
ENSCJAG00000008527	SPEN	97	71.328	ENSGALG00000036932	SPEN	99	71.502	Gallus_gallus
ENSCJAG00000008527	SPEN	69	84.024	ENSGAFG00000021570	si:ch1073-335m2.2	86	84.024	Gambusia_affinis
ENSCJAG00000008527	SPEN	96	44.313	ENSGAFG00000015819	-	90	73.962	Gambusia_affinis
ENSCJAG00000008527	SPEN	79	81.287	ENSGACG00000001176	si:ch1073-335m2.2	82	81.287	Gasterosteus_aculeatus
ENSCJAG00000008527	SPEN	97	47.128	ENSGACG00000005341	-	99	47.000	Gasterosteus_aculeatus
ENSCJAG00000008527	SPEN	97	97.456	ENSGAGG00000020785	SPEN	100	72.321	Gopherus_agassizii
ENSCJAG00000008527	SPEN	100	95.246	ENSGGOG00000012041	SPEN	100	95.056	Gorilla_gorilla
ENSCJAG00000008527	SPEN	96	81.461	ENSHBUG00000020626	-	99	72.727	Haplochromis_burtoni
ENSCJAG00000008527	SPEN	68	84.211	ENSHBUG00000023253	si:ch1073-335m2.2	85	84.211	Haplochromis_burtoni
ENSCJAG00000008527	SPEN	100	80.942	ENSHGLG00000019259	SPEN	100	80.568	Heterocephalus_glaber_female
ENSCJAG00000008527	SPEN	89	85.456	ENSHGLG00100019294	SPEN	95	85.456	Heterocephalus_glaber_male
ENSCJAG00000008527	SPEN	71	81.250	ENSHCOG00000006004	si:ch1073-335m2.2	81	81.250	Hippocampus_comes
ENSCJAG00000008527	SPEN	76	79.268	ENSIPUG00000018212	si:ch1073-335m2.2	87	79.268	Ictalurus_punctatus
ENSCJAG00000008527	SPEN	96	82.778	ENSIPUG00000021668	spen	98	81.967	Ictalurus_punctatus
ENSCJAG00000008527	SPEN	99	85.442	ENSSTOG00000021428	SPEN	100	86.077	Ictidomys_tridecemlineatus
ENSCJAG00000008527	SPEN	100	82.670	ENSJJAG00000010882	Spen	100	82.562	Jaculus_jaculus
ENSCJAG00000008527	SPEN	77	83.041	ENSKMAG00000021725	si:ch1073-335m2.2	85	83.041	Kryptolebias_marmoratus
ENSCJAG00000008527	SPEN	87	80.899	ENSKMAG00000003882	-	89	49.140	Kryptolebias_marmoratus
ENSCJAG00000008527	SPEN	72	78.333	ENSLBEG00000020855	si:ch1073-335m2.2	71	78.333	Labrus_bergylta
ENSCJAG00000008527	SPEN	75	80.874	ENSLBEG00000019129	-	90	69.828	Labrus_bergylta
ENSCJAG00000008527	SPEN	83	81.863	ENSLACG00000003258	SPEN	89	95.679	Latimeria_chalumnae
ENSCJAG00000008527	SPEN	96	78.235	ENSLOCG00000007896	si:ch1073-335m2.2	99	78.235	Lepisosteus_oculatus
ENSCJAG00000008527	SPEN	99	86.392	ENSLAFG00000004524	SPEN	100	86.284	Loxodonta_africana
ENSCJAG00000008527	SPEN	100	94.634	ENSMFAG00000041974	SPEN	100	94.607	Macaca_fascicularis
ENSCJAG00000008527	SPEN	100	94.976	ENSMMUG00000008026	SPEN	100	94.867	Macaca_mulatta
ENSCJAG00000008527	SPEN	100	94.770	ENSMNEG00000042402	SPEN	100	94.743	Macaca_nemestrina
ENSCJAG00000008527	SPEN	100	94.499	ENSMLEG00000039293	SPEN	99	94.309	Mandrillus_leucophaeus
ENSCJAG00000008527	SPEN	76	83.832	ENSMAMG00000023870	si:ch1073-335m2.2	85	83.832	Mastacembelus_armatus
ENSCJAG00000008527	SPEN	74	80.000	ENSMZEG00005011762	si:ch1073-335m2.2	85	84.211	Maylandia_zebra
ENSCJAG00000008527	SPEN	87	41.877	ENSMZEG00005021491	-	97	49.490	Maylandia_zebra
ENSCJAG00000008527	SPEN	100	97.843	ENSMAUG00000008318	Spen	99	97.843	Mesocricetus_auratus
ENSCJAG00000008527	SPEN	100	88.997	ENSMICG00000030994	SPEN	100	89.024	Microcebus_murinus
ENSCJAG00000008527	SPEN	100	81.184	ENSMOCG00000016083	Spen	100	81.590	Microtus_ochrogaster
ENSCJAG00000008527	SPEN	77	80.447	ENSMMOG00000021742	si:ch1073-335m2.2	85	80.447	Mola_mola
ENSCJAG00000008527	SPEN	97	70.690	ENSMODG00000003411	SPEN	100	70.506	Monodelphis_domestica
ENSCJAG00000008527	SPEN	86	82.022	ENSMALG00000008625	-	99	46.372	Monopterus_albus
ENSCJAG00000008527	SPEN	100	79.676	MGP_CAROLIEiJ_G0026745	Spen	100	79.913	Mus_caroli
ENSCJAG00000008527	SPEN	100	79.024	ENSMUSG00000040761	Spen	100	79.595	Mus_musculus
ENSCJAG00000008527	SPEN	100	78.876	MGP_PahariEiJ_G0029076	Spen	100	79.243	Mus_pahari
ENSCJAG00000008527	SPEN	100	79.251	MGP_SPRETEiJ_G0027724	Spen	100	79.822	Mus_spretus
ENSCJAG00000008527	SPEN	98	86.067	ENSMPUG00000016317	SPEN	100	86.310	Mustela_putorius_furo
ENSCJAG00000008527	SPEN	94	85.482	ENSMLUG00000010144	SPEN	99	93.939	Myotis_lucifugus
ENSCJAG00000008527	SPEN	100	78.149	ENSNGAG00000000641	Spen	96	84.372	Nannospalax_galili
ENSCJAG00000008527	SPEN	84	40.299	ENSNBRG00000022090	-	94	67.742	Neolamprologus_brichardi
ENSCJAG00000008527	SPEN	74	84.211	ENSNBRG00000005733	si:ch1073-335m2.2	83	84.211	Neolamprologus_brichardi
ENSCJAG00000008527	SPEN	99	94.952	ENSNLEG00000007652	SPEN	99	94.870	Nomascus_leucogenys
ENSCJAG00000008527	SPEN	87	93.750	ENSMEUG00000002422	SPEN	91	93.750	Notamacropus_eugenii
ENSCJAG00000008527	SPEN	93	89.706	ENSOPRG00000015800	SPEN	93	89.706	Ochotona_princeps
ENSCJAG00000008527	SPEN	100	90.215	ENSODEG00000016644	SPEN	100	77.092	Octodon_degus
ENSCJAG00000008527	SPEN	96	46.919	ENSONIG00000006573	-	99	81.273	Oreochromis_niloticus
ENSCJAG00000008527	SPEN	99	81.845	ENSOCUG00000010840	SPEN	99	89.109	Oryctolagus_cuniculus
ENSCJAG00000008527	SPEN	74	84.756	ENSORLG00000028894	-	91	84.756	Oryzias_latipes
ENSCJAG00000008527	SPEN	68	79.412	ENSORLG00000018414	si:ch1073-335m2.2	86	65.254	Oryzias_latipes
ENSCJAG00000008527	SPEN	74	84.756	ENSORLG00020007735	-	84	84.756	Oryzias_latipes_hni
ENSCJAG00000008527	SPEN	76	81.871	ENSORLG00020009351	si:ch1073-335m2.2	86	65.254	Oryzias_latipes_hni
ENSCJAG00000008527	SPEN	63	84.756	ENSORLG00015022085	-	86	84.756	Oryzias_latipes_hsok
ENSCJAG00000008527	SPEN	67	78.824	ENSORLG00015005537	si:ch1073-335m2.2	87	64.286	Oryzias_latipes_hsok
ENSCJAG00000008527	SPEN	79	65.254	ENSOMEG00000004509	si:ch1073-335m2.2	78	65.254	Oryzias_melastigma
ENSCJAG00000008527	SPEN	92	85.366	ENSOMEG00000007639	-	97	85.366	Oryzias_melastigma
ENSCJAG00000008527	SPEN	100	88.606	ENSOGAG00000025110	SPEN	100	88.525	Otolemur_garnettii
ENSCJAG00000008527	SPEN	99	85.687	ENSOARG00000008477	SPEN	99	85.575	Ovis_aries
ENSCJAG00000008527	SPEN	99	95.319	ENSPPAG00000035690	SPEN	100	95.155	Pan_paniscus
ENSCJAG00000008527	SPEN	100	95.327	ENSPTRG00000000210	SPEN	100	95.164	Pan_troglodytes
ENSCJAG00000008527	SPEN	100	93.781	ENSPANG00000006293	SPEN	100	93.726	Papio_anubis
ENSCJAG00000008527	SPEN	94	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	98	100.000	Paramormyrops_kingsleyae
ENSCJAG00000008527	SPEN	90	53.033	ENSPKIG00000002617	SPEN	90	81.273	Paramormyrops_kingsleyae
ENSCJAG00000008527	SPEN	96	91.925	ENSPSIG00000008026	SPEN	99	91.925	Pelodiscus_sinensis
ENSCJAG00000008527	SPEN	99	81.160	ENSPEMG00000022997	Spen	100	81.456	Peromyscus_maniculatus_bairdii
ENSCJAG00000008527	SPEN	58	85.207	ENSPFOG00000017986	si:ch1073-335m2.2	85	84.756	Poecilia_formosa
ENSCJAG00000008527	SPEN	68	85.207	ENSPLAG00000016625	si:ch1073-335m2.2	84	85.207	Poecilia_latipinna
ENSCJAG00000008527	SPEN	96	44.700	ENSPMEG00000006764	-	90	73.962	Poecilia_mexicana
ENSCJAG00000008527	SPEN	58	85.207	ENSPMEG00000002674	si:ch1073-335m2.2	76	85.207	Poecilia_mexicana
ENSCJAG00000008527	SPEN	96	44.850	ENSPREG00000010399	-	90	74.340	Poecilia_reticulata
ENSCJAG00000008527	SPEN	58	85.207	ENSPREG00000005357	si:ch1073-335m2.2	85	85.207	Poecilia_reticulata
ENSCJAG00000008527	SPEN	100	95.762	ENSPPYG00000001834	SPEN	100	95.545	Pongo_abelii
ENSCJAG00000008527	SPEN	88	92.527	ENSPCAG00000009543	SPEN	92	88.199	Procavia_capensis
ENSCJAG00000008527	SPEN	100	88.516	ENSPCOG00000021735	SPEN	100	88.407	Propithecus_coquereli
ENSCJAG00000008527	SPEN	84	94.468	ENSPVAG00000013794	SPEN	84	94.501	Pteropus_vampyrus
ENSCJAG00000008527	SPEN	57	84.211	ENSPNYG00000009042	si:ch1073-335m2.2	85	84.211	Pundamilia_nyererei
ENSCJAG00000008527	SPEN	96	81.461	ENSPNYG00000012379	-	98	49.745	Pundamilia_nyererei
ENSCJAG00000008527	SPEN	76	81.098	ENSPNAG00000011452	si:ch1073-335m2.2	84	81.098	Pygocentrus_nattereri
ENSCJAG00000008527	SPEN	96	84.181	ENSPNAG00000020795	spen	89	82.967	Pygocentrus_nattereri
ENSCJAG00000008527	SPEN	99	79.695	ENSRNOG00000033556	Spen	100	79.853	Rattus_norvegicus
ENSCJAG00000008527	SPEN	99	94.800	ENSRBIG00000039654	SPEN	100	94.581	Rhinopithecus_bieti
ENSCJAG00000008527	SPEN	99	94.816	ENSRROG00000035686	SPEN	100	94.533	Rhinopithecus_roxellana
ENSCJAG00000008527	SPEN	97	96.707	ENSSBOG00000028770	SPEN	99	96.707	Saimiri_boliviensis_boliviensis
ENSCJAG00000008527	SPEN	96	70.885	ENSSHAG00000004960	SPEN	99	93.182	Sarcophilus_harrisii
ENSCJAG00000008527	SPEN	77	90.854	ENSSFOG00015010267	si:ch1073-335m2.2	84	84.211	Scleropages_formosus
ENSCJAG00000008527	SPEN	84	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	Scleropages_formosus
ENSCJAG00000008527	SPEN	58	79.429	ENSSMAG00000000125	si:ch1073-335m2.2	85	73.558	Scophthalmus_maximus
ENSCJAG00000008527	SPEN	86	82.022	ENSSMAG00000008996	-	90	48.345	Scophthalmus_maximus
ENSCJAG00000008527	SPEN	89	75.124	ENSSDUG00000008416	si:ch1073-335m2.2	86	79.429	Seriola_dumerili
ENSCJAG00000008527	SPEN	91	82.584	ENSSDUG00000003476	-	90	75.655	Seriola_dumerili
ENSCJAG00000008527	SPEN	91	82.584	ENSSLDG00000012950	-	90	75.655	Seriola_lalandi_dorsalis
ENSCJAG00000008527	SPEN	78	79.429	ENSSLDG00000023347	si:ch1073-335m2.2	85	79.429	Seriola_lalandi_dorsalis
ENSCJAG00000008527	SPEN	86	66.161	ENSSPUG00000001866	-	100	66.131	Sphenodon_punctatus
ENSCJAG00000008527	SPEN	77	84.211	ENSSPAG00000012454	si:ch1073-335m2.2	85	84.211	Stegastes_partitus
ENSCJAG00000008527	SPEN	86	81.461	ENSSPAG00000006014	-	90	75.094	Stegastes_partitus
ENSCJAG00000008527	SPEN	85	87.424	ENSSSCG00000034484	SPEN	99	87.170	Sus_scrofa
ENSCJAG00000008527	SPEN	96	45.290	ENSTRUG00000024350	-	88	51.005	Takifugu_rubripes
ENSCJAG00000008527	SPEN	77	82.456	ENSTNIG00000014666	si:ch1073-335m2.2	75	82.456	Tetraodon_nigroviridis
ENSCJAG00000008527	SPEN	93	77.435	ENSTNIG00000010907	-	88	77.682	Tetraodon_nigroviridis
ENSCJAG00000008527	SPEN	76	94.860	ENSTBEG00000003628	SPEN	77	94.860	Tupaia_belangeri
ENSCJAG00000008527	SPEN	78	94.884	ENSTTRG00000015704	SPEN	79	94.884	Tursiops_truncatus
ENSCJAG00000008527	SPEN	100	87.085	ENSUAMG00000009600	SPEN	100	86.981	Ursus_americanus
ENSCJAG00000008527	SPEN	100	85.764	ENSUMAG00000021641	SPEN	100	85.580	Ursus_maritimus
ENSCJAG00000008527	SPEN	95	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSCJAG00000008527	SPEN	97	55.784	ENSXETG00000023114	SPEN	99	55.676	Xenopus_tropicalis
ENSCJAG00000008527	SPEN	60	84.024	ENSXCOG00000004516	si:ch1073-335m2.2	77	84.024	Xiphophorus_couchianus
ENSCJAG00000008527	SPEN	60	84.024	ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	Xiphophorus_maculatus
ENSCJAG00000008527	SPEN	96	44.728	ENSXMAG00000021384	-	90	72.075	Xiphophorus_maculatus