EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000008993 (Gene tree)
Gene ID: 100392289
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 63748 bases
Position: chrNTIC01012224.1:11883103-11946850
Accession: 100392289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000060423	RRM_1	PF00076.22	2.6e-09	1	1
ENSCJAP00000016605	RRM_1	PF00076.22	3.6e-09	1	1
ENSCJAP00000016578	RRM_1	PF00076.22	4.2e-09	1	1
ENSCJAP00000016619	RRM_1	PF00076.22	4.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000017555	SCAF4-202	3405	-	ENSCJAP00000016605	1134 (aa)	-	F6YLY3
ENSCJAT00000017570	SCAF4-204	3453	-	ENSCJAP00000016619	1150 (aa)	-	F6Y2H6
ENSCJAT00000017528	SCAF4-201	6117	-	ENSCJAP00000016578	1149 (aa)	XP_002761407	F7A4Z3
ENSCJAT00000082993	SCAF4-203	6644	-	ENSCJAP00000060423	835 (aa)	-	A0A2R8MJ07

Gene Model

Click here to download ENSCJAG00000008993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000008993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000008993	SCAF4	100	98.348	ENSG00000156304	SCAF4	100	98.348	Homo_sapiens
ENSCJAG00000008993	SCAF4	73	58.305	ENSAPOG00000019615	scaf4b	59	67.526	Acanthochromis_polyacanthus
ENSCJAG00000008993	SCAF4	90	59.067	ENSAPOG00000002946	scaf4a	55	56.822	Acanthochromis_polyacanthus
ENSCJAG00000008993	SCAF4	73	93.165	ENSAMEG00000014987	SCAF4	96	93.165	Ailuropoda_melanoleuca
ENSCJAG00000008993	SCAF4	77	60.440	ENSAOCG00000000615	scaf4a	55	59.070	Amphiprion_ocellaris
ENSCJAG00000008993	SCAF4	57	64.734	ENSAOCG00000010433	scaf4b	55	73.418	Amphiprion_ocellaris
ENSCJAG00000008993	SCAF4	57	64.734	ENSAPEG00000010913	scaf4b	55	73.418	Amphiprion_percula
ENSCJAG00000008993	SCAF4	77	60.073	ENSAPEG00000021229	scaf4a	55	58.921	Amphiprion_percula
ENSCJAG00000008993	SCAF4	66	57.143	ENSATEG00000011758	scaf4b	54	72.222	Anabas_testudineus
ENSCJAG00000008993	SCAF4	99	80.941	ENSAPLG00000002509	SCAF4	59	83.742	Anas_platyrhynchos
ENSCJAG00000008993	SCAF4	96	69.388	ENSACAG00000002569	SCAF4	59	79.757	Anolis_carolinensis
ENSCJAG00000008993	SCAF4	100	99.130	ENSANAG00000037494	SCAF4	100	99.130	Aotus_nancymaae
ENSCJAG00000008993	SCAF4	64	61.733	ENSACLG00000024833	scaf4b	55	74.051	Astatotilapia_calliptera
ENSCJAG00000008993	SCAF4	92	57.668	ENSAMXG00000008585	scaf4a	60	62.896	Astyanax_mexicanus
ENSCJAG00000008993	SCAF4	99	93.772	ENSBTAG00000018855	SCAF4	100	91.753	Bos_taurus
ENSCJAG00000008993	SCAF4	99	95.152	ENSCAFG00000008863	SCAF4	100	93.958	Canis_familiaris
ENSCJAG00000008993	SCAF4	99	91.013	ENSCAFG00020026019	SCAF4	100	92.126	Canis_lupus_dingo
ENSCJAG00000008993	SCAF4	99	93.445	ENSCHIG00000008385	SCAF4	100	91.436	Capra_hircus
ENSCJAG00000008993	SCAF4	99	95.990	ENSTSYG00000011344	SCAF4	99	96.591	Carlito_syrichta
ENSCJAG00000008993	SCAF4	99	90.877	ENSCPOG00000012443	SCAF4	100	89.914	Cavia_porcellus
ENSCJAG00000008993	SCAF4	100	99.043	ENSCCAG00000033727	SCAF4	100	99.043	Cebus_capucinus
ENSCJAG00000008993	SCAF4	100	97.656	ENSCATG00000030379	SCAF4	100	97.656	Cercocebus_atys
ENSCJAG00000008993	SCAF4	98	92.677	ENSCLAG00000006298	SCAF4	100	91.493	Chinchilla_lanigera
ENSCJAG00000008993	SCAF4	100	97.828	ENSCSAG00000009438	SCAF4	100	97.828	Chlorocebus_sabaeus
ENSCJAG00000008993	SCAF4	100	98.000	ENSCANG00000029847	SCAF4	100	98.000	Colobus_angolensis_palliatus
ENSCJAG00000008993	SCAF4	99	83.278	ENSCGRG00001020821	Scaf4	100	82.562	Cricetulus_griseus_chok1gshd
ENSCJAG00000008993	SCAF4	80	56.164	ENSCSEG00000012808	-	61	60.500	Cynoglossus_semilaevis
ENSCJAG00000008993	SCAF4	89	57.255	ENSCSEG00000019549	scaf4a	53	55.303	Cynoglossus_semilaevis
ENSCJAG00000008993	SCAF4	58	61.502	ENSCVAG00000009142	scaf4b	55	71.519	Cyprinodon_variegatus
ENSCJAG00000008993	SCAF4	88	57.213	ENSDARG00000077093	scaf4a	56	57.273	Danio_rerio
ENSCJAG00000008993	SCAF4	100	89.478	ENSDNOG00000019014	SCAF4	94	89.739	Dasypus_novemcinctus
ENSCJAG00000008993	SCAF4	92	97.436	ENSETEG00000000583	SCAF4	94	97.436	Echinops_telfairi
ENSCJAG00000008993	SCAF4	99	95.928	ENSEASG00005007756	SCAF4	100	93.734	Equus_asinus_asinus
ENSCJAG00000008993	SCAF4	99	96.048	ENSECAG00000014248	SCAF4	100	93.908	Equus_caballus
ENSCJAG00000008993	SCAF4	65	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSCJAG00000008993	SCAF4	99	94.537	ENSFCAG00000002228	SCAF4	100	92.381	Felis_catus
ENSCJAG00000008993	SCAF4	99	89.252	ENSFDAG00000017780	SCAF4	100	89.510	Fukomys_damarensis
ENSCJAG00000008993	SCAF4	67	58.696	ENSFHEG00000007634	scaf4b	55	71.519	Fundulus_heteroclitus
ENSCJAG00000008993	SCAF4	57	55.897	ENSGMOG00000018812	SCAF8	54	47.450	Gadus_morhua
ENSCJAG00000008993	SCAF4	99	80.815	ENSGALG00000033965	SCAF4	59	83.817	Gallus_gallus
ENSCJAG00000008993	SCAF4	65	70.122	ENSGACG00000020580	scaf4a	54	70.122	Gasterosteus_aculeatus
ENSCJAG00000008993	SCAF4	91	95.317	ENSGGOG00000015557	SCAF4	100	98.628	Gorilla_gorilla
ENSCJAG00000008993	SCAF4	99	92.571	ENSHGLG00000010582	SCAF4	100	91.323	Heterocephalus_glaber_female
ENSCJAG00000008993	SCAF4	98	92.446	ENSHGLG00100009441	SCAF4	100	91.217	Heterocephalus_glaber_male
ENSCJAG00000008993	SCAF4	57	55.455	ENSIPUG00000019311	-	57	66.901	Ictalurus_punctatus
ENSCJAG00000008993	SCAF4	69	49.770	ENSIPUG00000011285	scaf4	63	63.024	Ictalurus_punctatus
ENSCJAG00000008993	SCAF4	99	86.602	ENSSTOG00000004450	SCAF4	100	87.223	Ictidomys_tridecemlineatus
ENSCJAG00000008993	SCAF4	99	91.130	ENSJJAG00000019447	Scaf4	99	89.395	Jaculus_jaculus
ENSCJAG00000008993	SCAF4	71	57.831	ENSKMAG00000005742	scaf4b	59	69.231	Kryptolebias_marmoratus
ENSCJAG00000008993	SCAF4	92	54.282	ENSLBEG00000014675	scaf4a	54	53.261	Labrus_bergylta
ENSCJAG00000008993	SCAF4	95	64.828	ENSLACG00000013913	SCAF4	59	70.016	Latimeria_chalumnae
ENSCJAG00000008993	SCAF4	99	62.266	ENSLOCG00000009162	scaf4a	59	67.905	Lepisosteus_oculatus
ENSCJAG00000008993	SCAF4	99	97.163	ENSLAFG00000010710	SCAF4	100	91.354	Loxodonta_africana
ENSCJAG00000008993	SCAF4	100	97.835	ENSMFAG00000037668	SCAF4	100	97.835	Macaca_fascicularis
ENSCJAG00000008993	SCAF4	100	97.749	ENSMMUG00000001712	SCAF4	100	97.749	Macaca_mulatta
ENSCJAG00000008993	SCAF4	100	97.751	ENSMNEG00000032966	SCAF4	100	97.751	Macaca_nemestrina
ENSCJAG00000008993	SCAF4	99	98.180	ENSMLEG00000039674	SCAF4	100	97.900	Mandrillus_leucophaeus
ENSCJAG00000008993	SCAF4	99	80.579	ENSMGAG00000014515	SCAF4	59	83.901	Meleagris_gallopavo
ENSCJAG00000008993	SCAF4	98	89.183	ENSMAUG00000013307	Scaf4	100	88.137	Mesocricetus_auratus
ENSCJAG00000008993	SCAF4	99	97.719	ENSMICG00000005256	SCAF4	100	96.606	Microcebus_murinus
ENSCJAG00000008993	SCAF4	100	85.134	ENSMOCG00000012087	Scaf4	95	91.085	Microtus_ochrogaster
ENSCJAG00000008993	SCAF4	99	87.635	ENSMODG00000021040	SCAF4	100	83.507	Monodelphis_domestica
ENSCJAG00000008993	SCAF4	100	83.837	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.859	Mus_caroli
ENSCJAG00000008993	SCAF4	100	83.265	ENSMUSG00000022983	Scaf4	95	89.345	Mus_musculus
ENSCJAG00000008993	SCAF4	100	82.224	MGP_PahariEiJ_G0016649	Scaf4	95	87.786	Mus_pahari
ENSCJAG00000008993	SCAF4	100	84.016	MGP_SPRETEiJ_G0021850	Scaf4	100	85.526	Mus_spretus
ENSCJAG00000008993	SCAF4	100	92.721	ENSMPUG00000001078	SCAF4	100	92.548	Mustela_putorius_furo
ENSCJAG00000008993	SCAF4	99	82.955	ENSMLUG00000011472	SCAF4	99	77.956	Myotis_lucifugus
ENSCJAG00000008993	SCAF4	98	93.341	ENSNGAG00000005214	Scaf4	99	91.499	Nannospalax_galili
ENSCJAG00000008993	SCAF4	100	98.261	ENSNLEG00000003569	SCAF4	100	98.261	Nomascus_leucogenys
ENSCJAG00000008993	SCAF4	83	92.784	ENSOPRG00000007016	SCAF4	77	89.130	Ochotona_princeps
ENSCJAG00000008993	SCAF4	100	88.832	ENSODEG00000002718	SCAF4	100	88.747	Octodon_degus
ENSCJAG00000008993	SCAF4	51	78.205	ENSONIG00000005610	scaf4b	66	79.137	Oreochromis_niloticus
ENSCJAG00000008993	SCAF4	99	90.453	ENSOCUG00000008336	SCAF4	100	89.100	Oryctolagus_cuniculus
ENSCJAG00000008993	SCAF4	73	57.480	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSCJAG00000008993	SCAF4	61	60.345	ENSORLG00020013853	scaf4b	63	63.725	Oryzias_latipes_hni
ENSCJAG00000008993	SCAF4	99	88.697	ENSOGAG00000014653	SCAF4	94	94.975	Otolemur_garnettii
ENSCJAG00000008993	SCAF4	98	92.780	ENSOARG00000013894	SCAF4	99	90.641	Ovis_aries
ENSCJAG00000008993	SCAF4	100	98.348	ENSPPAG00000028535	SCAF4	100	98.348	Pan_paniscus
ENSCJAG00000008993	SCAF4	99	94.699	ENSPPRG00000000635	SCAF4	100	92.738	Panthera_pardus
ENSCJAG00000008993	SCAF4	99	93.439	ENSPTIG00000021578	SCAF4	99	89.640	Panthera_tigris_altaica
ENSCJAG00000008993	SCAF4	100	98.348	ENSPTRG00000013848	SCAF4	100	98.348	Pan_troglodytes
ENSCJAG00000008993	SCAF4	100	97.922	ENSPANG00000017332	SCAF4	100	97.922	Papio_anubis
ENSCJAG00000008993	SCAF4	88	64.597	ENSPKIG00000022408	scaf4a	90	67.066	Paramormyrops_kingsleyae
ENSCJAG00000008993	SCAF4	99	81.045	ENSPSIG00000014242	SCAF4	57	84.651	Pelodiscus_sinensis
ENSCJAG00000008993	SCAF4	63	54.667	ENSPMAG00000006192	SCAF8	72	63.758	Petromyzon_marinus
ENSCJAG00000008993	SCAF4	83	87.500	ENSPCIG00000028183	SCAF4	91	81.651	Phascolarctos_cinereus
ENSCJAG00000008993	SCAF4	64	56.115	ENSPLAG00000004403	-	53	71.338	Poecilia_latipinna
ENSCJAG00000008993	SCAF4	64	56.786	ENSPMEG00000006666	-	54	71.975	Poecilia_mexicana
ENSCJAG00000008993	SCAF4	58	62.736	ENSPREG00000013510	scaf4b	54	71.975	Poecilia_reticulata
ENSCJAG00000008993	SCAF4	100	98.435	ENSPPYG00000011355	SCAF4	100	98.435	Pongo_abelii
ENSCJAG00000008993	SCAF4	99	96.882	ENSPCOG00000018710	SCAF4	100	95.222	Propithecus_coquereli
ENSCJAG00000008993	SCAF4	99	93.758	ENSPVAG00000005220	SCAF4	100	92.428	Pteropus_vampyrus
ENSCJAG00000008993	SCAF4	64	61.011	ENSPNYG00000010526	scaf4b	55	74.051	Pundamilia_nyererei
ENSCJAG00000008993	SCAF4	96	59.169	ENSPNAG00000016892	scaf4a	60	64.018	Pygocentrus_nattereri
ENSCJAG00000008993	SCAF4	98	88.000	ENSRNOG00000002104	Scaf4	95	85.897	Rattus_norvegicus
ENSCJAG00000008993	SCAF4	99	95.702	ENSRBIG00000040007	SCAF4	100	95.648	Rhinopithecus_bieti
ENSCJAG00000008993	SCAF4	100	98.000	ENSRROG00000029488	SCAF4	100	98.000	Rhinopithecus_roxellana
ENSCJAG00000008993	SCAF4	99	86.315	ENSSHAG00000001581	SCAF4	100	82.783	Sarcophilus_harrisii
ENSCJAG00000008993	SCAF4	89	47.132	ENSSFOG00015006338	scaf4a	54	57.749	Scleropages_formosus
ENSCJAG00000008993	SCAF4	95	54.545	ENSSMAG00000017901	scaf4a	53	53.451	Scophthalmus_maximus
ENSCJAG00000008993	SCAF4	66	57.092	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSCJAG00000008993	SCAF4	90	58.301	ENSSDUG00000012918	scaf4a	54	59.403	Seriola_dumerili
ENSCJAG00000008993	SCAF4	61	61.649	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSCJAG00000008993	SCAF4	90	58.398	ENSSLDG00000021671	scaf4a	54	59.431	Seriola_lalandi_dorsalis
ENSCJAG00000008993	SCAF4	61	61.649	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSCJAG00000008993	SCAF4	99	92.317	ENSSARG00000009994	SCAF4	100	89.168	Sorex_araneus
ENSCJAG00000008993	SCAF4	100	90.250	ENSSSCG00000021023	SCAF4	100	90.250	Sus_scrofa
ENSCJAG00000008993	SCAF4	98	72.179	ENSTGUG00000013464	SCAF4	57	86.047	Taeniopygia_guttata
ENSCJAG00000008993	SCAF4	70	58.681	ENSTRUG00000009536	-	65	58.065	Takifugu_rubripes
ENSCJAG00000008993	SCAF4	99	94.660	ENSTTRG00000010963	SCAF4	100	91.659	Tursiops_truncatus
ENSCJAG00000008993	SCAF4	99	92.695	ENSUAMG00000008860	SCAF4	100	90.688	Ursus_americanus
ENSCJAG00000008993	SCAF4	98	92.552	ENSUMAG00000016962	SCAF4	100	91.189	Ursus_maritimus
ENSCJAG00000008993	SCAF4	98	95.244	ENSVVUG00000002953	SCAF4	100	94.102	Vulpes_vulpes
ENSCJAG00000008993	SCAF4	99	55.371	ENSXETG00000007351	scaf4	91	66.714	Xenopus_tropicalis