EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000009106 (Gene tree)
Gene ID: 100400000
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 55557 bases
Position: chrNTIC01013335.1:24238535-24294091
Accession: 100400000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000016809	zf-CCCH	PF00642.24	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000017771	RC3H1-201	3640	XM_008984986	ENSCJAP00000016809	1133 (aa)	XP_008983234	F6YKI3

Gene Model

Click here to download ENSCJAG00000009106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000009106	RC3H1	96	52.905	ENSCJAG00000020050	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009106	RC3H1	100	98.588	ENSG00000135870	RC3H1	100	98.588	Homo_sapiens
ENSCJAG00000009106	RC3H1	100	96.911	ENSAMEG00000015657	RC3H1	100	96.911	Ailuropoda_melanoleuca
ENSCJAG00000009106	RC3H1	100	87.881	ENSAPLG00000005341	RC3H1	100	87.794	Anas_platyrhynchos
ENSCJAG00000009106	RC3H1	100	85.079	ENSACAG00000015271	RC3H1	100	85.079	Anolis_carolinensis
ENSCJAG00000009106	RC3H1	100	99.470	ENSANAG00000036716	RC3H1	100	99.470	Aotus_nancymaae
ENSCJAG00000009106	RC3H1	100	95.499	ENSBTAG00000052708	RC3H1	100	95.499	Bos_taurus
ENSCJAG00000009106	RC3H1	100	96.911	ENSCAFG00000014434	RC3H1	100	96.911	Canis_familiaris
ENSCJAG00000009106	RC3H1	100	96.825	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSCJAG00000009106	RC3H1	100	95.852	ENSCHIG00000002873	RC3H1	100	95.852	Capra_hircus
ENSCJAG00000009106	RC3H1	99	95.146	ENSTSYG00000003913	RC3H1	99	95.057	Carlito_syrichta
ENSCJAG00000009106	RC3H1	100	91.093	ENSCPOG00000004349	RC3H1	100	90.741	Cavia_porcellus
ENSCJAG00000009106	RC3H1	100	97.352	ENSCCAG00000025652	RC3H1	100	97.352	Cebus_capucinus
ENSCJAG00000009106	RC3H1	100	98.764	ENSCATG00000033497	RC3H1	100	98.764	Cercocebus_atys
ENSCJAG00000009106	RC3H1	100	94.621	ENSCLAG00000011267	RC3H1	100	94.533	Chinchilla_lanigera
ENSCJAG00000009106	RC3H1	96	98.711	ENSCSAG00000011823	RC3H1	85	98.711	Chlorocebus_sabaeus
ENSCJAG00000009106	RC3H1	93	96.304	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSCJAG00000009106	RC3H1	100	98.765	ENSCANG00000032120	RC3H1	100	98.765	Colobus_angolensis_palliatus
ENSCJAG00000009106	RC3H1	100	94.175	ENSCGRG00001020812	Rc3h1	100	93.733	Cricetulus_griseus_chok1gshd
ENSCJAG00000009106	RC3H1	100	94.175	ENSCGRG00000011952	Rc3h1	100	93.733	Cricetulus_griseus_crigri
ENSCJAG00000009106	RC3H1	55	94.855	ENSDNOG00000011494	RC3H1	99	94.855	Dasypus_novemcinctus
ENSCJAG00000009106	RC3H1	100	95.410	ENSDORG00000004855	Rc3h1	100	95.410	Dipodomys_ordii
ENSCJAG00000009106	RC3H1	81	96.407	ENSETEG00000012064	RC3H1	87	96.407	Echinops_telfairi
ENSCJAG00000009106	RC3H1	100	95.852	ENSEASG00005017000	RC3H1	100	95.852	Equus_asinus_asinus
ENSCJAG00000009106	RC3H1	100	95.675	ENSECAG00000021208	RC3H1	100	95.675	Equus_caballus
ENSCJAG00000009106	RC3H1	89	83.488	ENSEEUG00000014861	RC3H1	93	83.488	Erinaceus_europaeus
ENSCJAG00000009106	RC3H1	100	97.529	ENSFCAG00000014924	RC3H1	100	97.529	Felis_catus
ENSCJAG00000009106	RC3H1	100	86.812	ENSFALG00000002947	RC3H1	100	86.201	Ficedula_albicollis
ENSCJAG00000009106	RC3H1	100	94.533	ENSFDAG00000013303	RC3H1	100	94.444	Fukomys_damarensis
ENSCJAG00000009106	RC3H1	100	86.854	ENSGALG00000004587	RC3H1	100	86.766	Gallus_gallus
ENSCJAG00000009106	RC3H1	100	87.467	ENSGAGG00000018194	RC3H1	100	87.642	Gopherus_agassizii
ENSCJAG00000009106	RC3H1	100	91.909	ENSGGOG00000005735	RC3H1	100	91.909	Gorilla_gorilla
ENSCJAG00000009106	RC3H1	88	88.363	ENSHGLG00000004183	-	99	88.315	Heterocephalus_glaber_female
ENSCJAG00000009106	RC3H1	100	94.092	ENSHGLG00100008577	RC3H1	100	94.004	Heterocephalus_glaber_male
ENSCJAG00000009106	RC3H1	100	96.208	ENSSTOG00000016033	RC3H1	100	96.208	Ictidomys_tridecemlineatus
ENSCJAG00000009106	RC3H1	100	94.704	ENSJJAG00000018915	Rc3h1	100	94.528	Jaculus_jaculus
ENSCJAG00000009106	RC3H1	100	75.022	ENSLACG00000016186	RC3H1	100	78.069	Latimeria_chalumnae
ENSCJAG00000009106	RC3H1	97	97.177	ENSLAFG00000004367	RC3H1	100	97.177	Loxodonta_africana
ENSCJAG00000009106	RC3H1	100	98.676	ENSMFAG00000033725	RC3H1	100	98.676	Macaca_fascicularis
ENSCJAG00000009106	RC3H1	100	98.588	ENSMMUG00000000630	RC3H1	100	98.588	Macaca_mulatta
ENSCJAG00000009106	RC3H1	100	98.764	ENSMNEG00000035968	RC3H1	100	98.764	Macaca_nemestrina
ENSCJAG00000009106	RC3H1	100	98.676	ENSMLEG00000037455	RC3H1	100	98.676	Mandrillus_leucophaeus
ENSCJAG00000009106	RC3H1	97	94.254	ENSMAUG00000020864	Rc3h1	100	93.750	Mesocricetus_auratus
ENSCJAG00000009106	RC3H1	100	97.352	ENSMICG00000003000	RC3H1	100	97.352	Microcebus_murinus
ENSCJAG00000009106	RC3H1	93	92.992	ENSMOCG00000016587	Rc3h1	98	92.519	Microtus_ochrogaster
ENSCJAG00000009106	RC3H1	100	92.063	ENSMODG00000004289	RC3H1	100	92.152	Monodelphis_domestica
ENSCJAG00000009106	RC3H1	100	93.822	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.292	Mus_caroli
ENSCJAG00000009106	RC3H1	100	93.645	ENSMUSG00000040423	Rc3h1	100	93.116	Mus_musculus
ENSCJAG00000009106	RC3H1	100	93.469	MGP_PahariEiJ_G0027992	Rc3h1	100	92.939	Mus_pahari
ENSCJAG00000009106	RC3H1	100	93.469	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.939	Mus_spretus
ENSCJAG00000009106	RC3H1	100	96.737	ENSMPUG00000004747	RC3H1	100	96.737	Mustela_putorius_furo
ENSCJAG00000009106	RC3H1	100	95.234	ENSMLUG00000011127	RC3H1	100	95.146	Myotis_lucifugus
ENSCJAG00000009106	RC3H1	100	95.587	ENSNGAG00000011135	Rc3h1	100	95.057	Nannospalax_galili
ENSCJAG00000009106	RC3H1	100	98.500	ENSNLEG00000015327	RC3H1	100	98.500	Nomascus_leucogenys
ENSCJAG00000009106	RC3H1	99	83.201	ENSOPRG00000013068	RC3H1	99	83.112	Ochotona_princeps
ENSCJAG00000009106	RC3H1	100	94.268	ENSODEG00000014185	RC3H1	100	94.180	Octodon_degus
ENSCJAG00000009106	RC3H1	100	91.266	ENSOANG00000000924	RC3H1	100	91.179	Ornithorhynchus_anatinus
ENSCJAG00000009106	RC3H1	99	95.971	ENSOCUG00000004930	RC3H1	98	95.882	Oryctolagus_cuniculus
ENSCJAG00000009106	RC3H1	100	89.868	ENSOGAG00000004044	RC3H1	100	89.780	Otolemur_garnettii
ENSCJAG00000009106	RC3H1	100	96.053	ENSOARG00000013011	RC3H1	100	96.053	Ovis_aries
ENSCJAG00000009106	RC3H1	100	98.589	ENSPPAG00000039253	RC3H1	100	98.589	Pan_paniscus
ENSCJAG00000009106	RC3H1	100	96.734	ENSPPRG00000009007	RC3H1	100	96.734	Panthera_pardus
ENSCJAG00000009106	RC3H1	100	97.100	ENSPTIG00000015326	RC3H1	100	97.100	Panthera_tigris_altaica
ENSCJAG00000009106	RC3H1	100	98.589	ENSPTRG00000001702	RC3H1	100	98.589	Pan_troglodytes
ENSCJAG00000009106	RC3H1	100	98.676	ENSPANG00000008886	RC3H1	100	98.676	Papio_anubis
ENSCJAG00000009106	RC3H1	100	88.606	ENSPSIG00000016181	RC3H1	100	88.782	Pelodiscus_sinensis
ENSCJAG00000009106	RC3H1	100	93.822	ENSPEMG00000011966	Rc3h1	100	93.380	Peromyscus_maniculatus_bairdii
ENSCJAG00000009106	RC3H1	70	94.304	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSCJAG00000009106	RC3H1	100	95.234	ENSPPYG00000000490	RC3H1	98	97.703	Pongo_abelii
ENSCJAG00000009106	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSCJAG00000009106	RC3H1	83	96.368	ENSPCOG00000021795	RC3H1	96	96.368	Propithecus_coquereli
ENSCJAG00000009106	RC3H1	100	87.555	ENSPVAG00000007593	RC3H1	100	87.467	Pteropus_vampyrus
ENSCJAG00000009106	RC3H1	97	61.715	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSCJAG00000009106	RC3H1	100	98.677	ENSRBIG00000037743	RC3H1	100	98.677	Rhinopithecus_bieti
ENSCJAG00000009106	RC3H1	100	98.676	ENSRROG00000036546	RC3H1	100	98.676	Rhinopithecus_roxellana
ENSCJAG00000009106	RC3H1	93	89.962	ENSSBOG00000010664	RC3H1	100	93.094	Saimiri_boliviensis_boliviensis
ENSCJAG00000009106	RC3H1	100	90.925	ENSSHAG00000007589	RC3H1	100	91.013	Sarcophilus_harrisii
ENSCJAG00000009106	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSCJAG00000009106	RC3H1	100	83.975	ENSSPUG00000018472	RC3H1	100	83.436	Sphenodon_punctatus
ENSCJAG00000009106	RC3H1	100	97.087	ENSSSCG00000015498	RC3H1	100	97.087	Sus_scrofa
ENSCJAG00000009106	RC3H1	100	87.281	ENSTGUG00000004090	RC3H1	100	87.193	Taeniopygia_guttata
ENSCJAG00000009106	RC3H1	93	90.411	ENSTBEG00000005015	RC3H1	93	90.361	Tupaia_belangeri
ENSCJAG00000009106	RC3H1	100	96.564	ENSTTRG00000008572	RC3H1	100	96.564	Tursiops_truncatus
ENSCJAG00000009106	RC3H1	100	96.381	ENSUAMG00000019525	RC3H1	100	96.381	Ursus_americanus
ENSCJAG00000009106	RC3H1	100	96.914	ENSUMAG00000020087	RC3H1	100	96.914	Ursus_maritimus
ENSCJAG00000009106	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSCJAG00000009106	RC3H1	100	96.570	ENSVVUG00000014201	RC3H1	100	96.570	Vulpes_vulpes
ENSCJAG00000009106	RC3H1	100	78.677	ENSXETG00000020030	rc3h1	100	78.223	Xenopus_tropicalis