EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000009118 (Gene tree)
Gene ID: 100407889
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 86215 bases
Position: chrNTIC01012224.1:11217303-11303517
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000016716	Npa1	PF11707.8	1.9e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000017664	URB1-202	2955	-	ENSCJAP00000016709	680 (aa)	-	F7BN36
ENSCJAT00000017671	URB1-201	6828	-	ENSCJAP00000016716	2275 (aa)	-	F7BMS6

Gene Model

Click here to download ENSCJAG00000009118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009118	URB1	99	92.586	ENSG00000142207	URB1	100	92.571	Homo_sapiens
ENSCJAG00000009118	URB1	99	43.137	ENSAPOG00000020308	urb1	99	43.352	Acanthochromis_polyacanthus
ENSCJAG00000009118	URB1	100	81.327	ENSAMEG00000011998	URB1	99	81.371	Ailuropoda_melanoleuca
ENSCJAG00000009118	URB1	94	44.944	ENSACIG00000003248	urb1	96	44.944	Amphilophus_citrinellus
ENSCJAG00000009118	URB1	99	40.625	ENSAOCG00000010364	urb1	99	40.929	Amphiprion_ocellaris
ENSCJAG00000009118	URB1	97	52.544	ENSAPEG00000010758	urb1	99	53.165	Amphiprion_percula
ENSCJAG00000009118	URB1	99	43.611	ENSATEG00000011790	urb1	96	44.444	Anabas_testudineus
ENSCJAG00000009118	URB1	97	56.005	ENSAPLG00000012791	URB1	100	55.915	Anas_platyrhynchos
ENSCJAG00000009118	URB1	99	53.260	ENSACAG00000002817	URB1	98	53.207	Anolis_carolinensis
ENSCJAG00000009118	URB1	100	94.991	ENSANAG00000024617	URB1	100	94.991	Aotus_nancymaae
ENSCJAG00000009118	URB1	99	44.696	ENSACLG00000024865	urb1	99	44.820	Astatotilapia_calliptera
ENSCJAG00000009118	URB1	99	39.772	ENSAMXG00000012306	urb1	99	39.974	Astyanax_mexicanus
ENSCJAG00000009118	URB1	99	76.849	ENSBTAG00000012412	URB1	99	76.805	Bos_taurus
ENSCJAG00000009118	URB1	100	81.069	ENSCAFG00000008892	URB1	100	81.069	Canis_familiaris
ENSCJAG00000009118	URB1	100	80.158	ENSCAFG00020025994	-	100	80.158	Canis_lupus_dingo
ENSCJAG00000009118	URB1	100	81.080	ENSCAFG00020025987	-	100	81.080	Canis_lupus_dingo
ENSCJAG00000009118	URB1	99	76.193	ENSCHIG00000015645	URB1	99	76.193	Capra_hircus
ENSCJAG00000009118	URB1	100	85.670	ENSTSYG00000013286	URB1	99	85.670	Carlito_syrichta
ENSCJAG00000009118	URB1	98	78.536	ENSCAPG00000015589	URB1	99	78.536	Cavia_aperea
ENSCJAG00000009118	URB1	99	79.789	ENSCPOG00000006748	URB1	99	79.789	Cavia_porcellus
ENSCJAG00000009118	URB1	100	94.945	ENSCCAG00000021299	URB1	100	94.945	Cebus_capucinus
ENSCJAG00000009118	URB1	100	92.484	ENSCATG00000042630	URB1	100	92.484	Cercocebus_atys
ENSCJAG00000009118	URB1	99	80.185	ENSCLAG00000005262	URB1	99	80.185	Chinchilla_lanigera
ENSCJAG00000009118	URB1	100	90.635	ENSCSAG00000009584	URB1	100	90.635	Chlorocebus_sabaeus
ENSCJAG00000009118	URB1	99	58.885	ENSCPBG00000006454	URB1	99	59.095	Chrysemys_picta_bellii
ENSCJAG00000009118	URB1	100	92.352	ENSCANG00000031088	URB1	100	92.352	Colobus_angolensis_palliatus
ENSCJAG00000009118	URB1	99	76.101	ENSCGRG00001010616	Urb1	99	75.879	Cricetulus_griseus_chok1gshd
ENSCJAG00000009118	URB1	98	75.876	ENSCGRG00000015840	Urb1	99	75.876	Cricetulus_griseus_crigri
ENSCJAG00000009118	URB1	97	48.649	ENSCSEG00000012616	urb1	99	50.296	Cynoglossus_semilaevis
ENSCJAG00000009118	URB1	95	51.178	ENSCVAG00000009076	urb1	97	52.052	Cyprinodon_variegatus
ENSCJAG00000009118	URB1	99	42.795	ENSDARG00000060308	urb1	99	43.392	Danio_rerio
ENSCJAG00000009118	URB1	85	80.487	ENSDNOG00000015586	URB1	99	80.487	Dasypus_novemcinctus
ENSCJAG00000009118	URB1	100	79.394	ENSDORG00000006735	Urb1	100	79.394	Dipodomys_ordii
ENSCJAG00000009118	URB1	92	80.479	ENSETEG00000009080	URB1	92	80.479	Echinops_telfairi
ENSCJAG00000009118	URB1	100	81.503	ENSEASG00005007711	URB1	100	81.431	Equus_asinus_asinus
ENSCJAG00000009118	URB1	96	88.510	ENSECAG00000013206	URB1	100	88.510	Equus_caballus
ENSCJAG00000009118	URB1	58	87.448	ENSEEUG00000003626	-	57	87.448	Erinaceus_europaeus
ENSCJAG00000009118	URB1	98	44.602	ENSELUG00000020516	urb1	98	44.538	Esox_lucius
ENSCJAG00000009118	URB1	100	81.072	ENSFCAG00000002177	URB1	100	81.203	Felis_catus
ENSCJAG00000009118	URB1	98	51.392	ENSFALG00000004636	URB1	99	51.443	Ficedula_albicollis
ENSCJAG00000009118	URB1	100	80.114	ENSFDAG00000007288	URB1	95	80.114	Fukomys_damarensis
ENSCJAG00000009118	URB1	99	41.387	ENSFHEG00000000202	urb1	99	41.863	Fundulus_heteroclitus
ENSCJAG00000009118	URB1	91	48.089	ENSGMOG00000001838	urb1	92	47.915	Gadus_morhua
ENSCJAG00000009118	URB1	99	56.250	ENSGALG00000015887	URB1	99	56.272	Gallus_gallus
ENSCJAG00000009118	URB1	93	52.570	ENSGAFG00000020694	urb1	96	52.814	Gambusia_affinis
ENSCJAG00000009118	URB1	99	44.240	ENSGACG00000011703	urb1	99	44.240	Gasterosteus_aculeatus
ENSCJAG00000009118	URB1	99	58.337	ENSGAGG00000022544	URB1	99	58.542	Gopherus_agassizii
ENSCJAG00000009118	URB1	100	92.527	ENSGGOG00000000285	URB1	100	92.527	Gorilla_gorilla
ENSCJAG00000009118	URB1	99	44.768	ENSHBUG00000001904	urb1	99	44.932	Haplochromis_burtoni
ENSCJAG00000009118	URB1	99	78.321	ENSHGLG00000004907	URB1	99	78.321	Heterocephalus_glaber_female
ENSCJAG00000009118	URB1	99	79.000	ENSHGLG00100010749	URB1	99	79.000	Heterocephalus_glaber_male
ENSCJAG00000009118	URB1	74	48.141	ENSHCOG00000018683	urb1	97	48.337	Hippocampus_comes
ENSCJAG00000009118	URB1	99	40.780	ENSIPUG00000014721	urb1	99	40.736	Ictalurus_punctatus
ENSCJAG00000009118	URB1	100	81.966	ENSSTOG00000004539	URB1	100	81.966	Ictidomys_tridecemlineatus
ENSCJAG00000009118	URB1	96	46.641	ENSKMAG00000006001	urb1	98	46.850	Kryptolebias_marmoratus
ENSCJAG00000009118	URB1	97	41.293	ENSLBEG00000027208	urb1	99	51.765	Labrus_bergylta
ENSCJAG00000009118	URB1	99	48.531	ENSLACG00000017059	URB1	100	48.531	Latimeria_chalumnae
ENSCJAG00000009118	URB1	99	45.777	ENSLOCG00000009190	urb1	99	45.734	Lepisosteus_oculatus
ENSCJAG00000009118	URB1	99	78.284	ENSLAFG00000010407	URB1	100	78.284	Loxodonta_africana
ENSCJAG00000009118	URB1	100	92.440	ENSMFAG00000034391	URB1	97	92.440	Macaca_fascicularis
ENSCJAG00000009118	URB1	100	92.308	ENSMMUG00000010295	URB1	100	92.308	Macaca_mulatta
ENSCJAG00000009118	URB1	100	90.989	ENSMNEG00000032981	URB1	100	90.989	Macaca_nemestrina
ENSCJAG00000009118	URB1	100	92.571	ENSMLEG00000041435	URB1	100	92.571	Mandrillus_leucophaeus
ENSCJAG00000009118	URB1	99	42.907	ENSMAMG00000011238	urb1	99	42.907	Mastacembelus_armatus
ENSCJAG00000009118	URB1	99	41.804	ENSMZEG00005011862	urb1	99	41.937	Maylandia_zebra
ENSCJAG00000009118	URB1	98	56.896	ENSMGAG00000014512	URB1	99	56.718	Meleagris_gallopavo
ENSCJAG00000009118	URB1	92	78.540	ENSMAUG00000010516	Urb1	99	78.645	Mesocricetus_auratus
ENSCJAG00000009118	URB1	99	84.615	ENSMICG00000016424	URB1	99	84.615	Microcebus_murinus
ENSCJAG00000009118	URB1	99	74.362	ENSMOCG00000012613	Urb1	99	74.144	Microtus_ochrogaster
ENSCJAG00000009118	URB1	99	64.105	ENSMODG00000021076	URB1	100	63.974	Monodelphis_domestica
ENSCJAG00000009118	URB1	96	52.416	ENSMALG00000017411	urb1	99	53.112	Monopterus_albus
ENSCJAG00000009118	URB1	99	75.362	MGP_CAROLIEiJ_G0020948	Urb1	99	75.362	Mus_caroli
ENSCJAG00000009118	URB1	99	75.538	ENSMUSG00000039929	Urb1	99	75.538	Mus_musculus
ENSCJAG00000009118	URB1	99	75.714	MGP_PahariEiJ_G0016653	Urb1	99	75.714	Mus_pahari
ENSCJAG00000009118	URB1	99	75.439	MGP_SPRETEiJ_G0021854	Urb1	99	75.439	Mus_spretus
ENSCJAG00000009118	URB1	100	79.613	ENSMPUG00000001123	URB1	100	79.613	Mustela_putorius_furo
ENSCJAG00000009118	URB1	99	77.011	ENSNGAG00000001905	Urb1	99	77.011	Nannospalax_galili
ENSCJAG00000009118	URB1	82	45.348	ENSNBRG00000001049	urb1	98	45.626	Neolamprologus_brichardi
ENSCJAG00000009118	URB1	99	91.086	ENSNLEG00000026872	URB1	100	91.033	Nomascus_leucogenys
ENSCJAG00000009118	URB1	96	59.705	ENSMEUG00000010828	URB1	96	59.579	Notamacropus_eugenii
ENSCJAG00000009118	URB1	99	73.684	ENSOPRG00000013482	URB1	100	73.684	Ochotona_princeps
ENSCJAG00000009118	URB1	100	78.894	ENSODEG00000002587	URB1	99	78.894	Octodon_degus
ENSCJAG00000009118	URB1	99	45.078	ENSONIG00000005599	urb1	99	45.251	Oreochromis_niloticus
ENSCJAG00000009118	URB1	99	80.106	ENSOCUG00000009381	URB1	99	80.106	Oryctolagus_cuniculus
ENSCJAG00000009118	URB1	99	43.043	ENSORLG00000003429	urb1	99	43.082	Oryzias_latipes
ENSCJAG00000009118	URB1	99	42.957	ENSORLG00020013785	urb1	99	43.045	Oryzias_latipes_hni
ENSCJAG00000009118	URB1	95	46.237	ENSORLG00015019421	urb1	97	46.313	Oryzias_latipes_hsok
ENSCJAG00000009118	URB1	76	49.767	ENSOMEG00000002094	urb1	98	50.822	Oryzias_melastigma
ENSCJAG00000009118	URB1	99	83.949	ENSOGAG00000017140	URB1	100	83.817	Otolemur_garnettii
ENSCJAG00000009118	URB1	97	77.334	ENSOARG00000013679	URB1	99	77.334	Ovis_aries
ENSCJAG00000009118	URB1	100	92.747	ENSPPAG00000003423	URB1	100	92.791	Pan_paniscus
ENSCJAG00000009118	URB1	100	81.459	ENSPPRG00000023131	URB1	100	81.459	Panthera_pardus
ENSCJAG00000009118	URB1	93	79.487	ENSPTIG00000016125	URB1	99	79.487	Panthera_tigris_altaica
ENSCJAG00000009118	URB1	100	92.703	ENSPTRG00000013852	URB1	100	92.747	Pan_troglodytes
ENSCJAG00000009118	URB1	100	92.615	ENSPANG00000021964	URB1	100	92.615	Papio_anubis
ENSCJAG00000009118	URB1	99	45.371	ENSPKIG00000003683	urb1	98	45.447	Paramormyrops_kingsleyae
ENSCJAG00000009118	URB1	99	76.033	ENSPEMG00000021205	Urb1	99	76.033	Peromyscus_maniculatus_bairdii
ENSCJAG00000009118	URB1	80	34.268	ENSPMAG00000009733	URB1	100	34.373	Petromyzon_marinus
ENSCJAG00000009118	URB1	99	64.161	ENSPCIG00000016350	URB1	100	63.942	Phascolarctos_cinereus
ENSCJAG00000009118	URB1	96	42.450	ENSPLAG00000004371	urb1	99	42.450	Poecilia_latipinna
ENSCJAG00000009118	URB1	98	43.314	ENSPMEG00000006634	urb1	98	43.373	Poecilia_mexicana
ENSCJAG00000009118	URB1	98	43.486	ENSPREG00000013453	urb1	98	43.591	Poecilia_reticulata
ENSCJAG00000009118	URB1	99	92.321	ENSPPYG00000011359	URB1	100	92.220	Pongo_abelii
ENSCJAG00000009118	URB1	99	66.505	ENSPCAG00000007430	URB1	99	66.505	Procavia_capensis
ENSCJAG00000009118	URB1	100	85.582	ENSPCOG00000022695	URB1	100	85.582	Propithecus_coquereli
ENSCJAG00000009118	URB1	100	79.482	ENSPVAG00000000889	URB1	100	79.482	Pteropus_vampyrus
ENSCJAG00000009118	URB1	99	43.106	ENSPNYG00000010589	urb1	99	43.254	Pundamilia_nyererei
ENSCJAG00000009118	URB1	99	40.466	ENSPNAG00000019324	urb1	99	40.624	Pygocentrus_nattereri
ENSCJAG00000009118	URB1	99	75.154	ENSRNOG00000002080	Urb1	99	75.285	Rattus_norvegicus
ENSCJAG00000009118	URB1	100	92.088	ENSRBIG00000033122	URB1	100	92.088	Rhinopithecus_bieti
ENSCJAG00000009118	URB1	100	92.088	ENSRROG00000040237	URB1	100	92.088	Rhinopithecus_roxellana
ENSCJAG00000009118	URB1	100	94.200	ENSSBOG00000027672	URB1	100	94.200	Saimiri_boliviensis_boliviensis
ENSCJAG00000009118	URB1	99	63.446	ENSSHAG00000005140	URB1	100	63.316	Sarcophilus_harrisii
ENSCJAG00000009118	URB1	91	46.004	ENSSFOG00015000339	urb1	97	46.261	Scleropages_formosus
ENSCJAG00000009118	URB1	99	43.658	ENSSMAG00000003782	urb1	99	43.783	Scophthalmus_maximus
ENSCJAG00000009118	URB1	99	44.643	ENSSDUG00000012313	urb1	99	44.643	Seriola_dumerili
ENSCJAG00000009118	URB1	99	44.580	ENSSLDG00000023179	urb1	99	44.706	Seriola_lalandi_dorsalis
ENSCJAG00000009118	URB1	99	55.228	ENSSPUG00000012447	URB1	99	55.766	Sphenodon_punctatus
ENSCJAG00000009118	URB1	99	44.247	ENSSPAG00000006325	urb1	99	44.381	Stegastes_partitus
ENSCJAG00000009118	URB1	100	78.455	ENSSSCG00000032024	URB1	100	78.455	Sus_scrofa
ENSCJAG00000009118	URB1	73	58.124	ENSTGUG00000013442	URB1	100	58.124	Taeniopygia_guttata
ENSCJAG00000009118	URB1	99	44.080	ENSTRUG00000009372	urb1	99	44.233	Takifugu_rubripes
ENSCJAG00000009118	URB1	99	43.253	ENSTNIG00000016277	urb1	99	43.159	Tetraodon_nigroviridis
ENSCJAG00000009118	URB1	81	84.638	ENSTBEG00000010044	URB1	81	84.638	Tupaia_belangeri
ENSCJAG00000009118	URB1	91	78.556	ENSTTRG00000007712	URB1	92	78.661	Tursiops_truncatus
ENSCJAG00000009118	URB1	100	81.151	ENSUAMG00000012231	URB1	99	81.151	Ursus_americanus
ENSCJAG00000009118	URB1	93	81.530	ENSUMAG00000017419	URB1	98	82.141	Ursus_maritimus
ENSCJAG00000009118	URB1	68	87.500	ENSVPAG00000001164	URB1	68	87.500	Vicugna_pacos
ENSCJAG00000009118	URB1	100	80.789	ENSVVUG00000000551	URB1	100	80.789	Vulpes_vulpes
ENSCJAG00000009118	URB1	99	49.589	ENSXETG00000009895	urb1	99	50.022	Xenopus_tropicalis
ENSCJAG00000009118	URB1	99	40.641	ENSXCOG00000005500	urb1	99	40.688	Xiphophorus_couchianus
ENSCJAG00000009118	URB1	99	40.765	ENSXMAG00000007253	urb1	99	40.813	Xiphophorus_maculatus