EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000009146 (Gene tree)
Gene ID: 100408670
Gene Symbol: SRRM4
Alias: KIAA1853|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 167050 bases
Position: chrNTIC01000002.1:12735443-12902492
Accession: 29389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000016805	SRRM_C	PF15230.6	4.1e-25	1	1
ENSCJAP00000055543	SRRM_C	PF15230.6	5.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000085034	SRRM4-203	1573	-	ENSCJAP00000060512	270 (aa)	-	A0A2R8N5Y7
ENSCJAT00000068979	SRRM4-201	2608	-	ENSCJAP00000055543	615 (aa)	-	A0A2R8P558
ENSCJAT00000017765	SRRM4-202	1596	-	ENSCJAP00000016805	531 (aa)	-	F6YKL5

Gene Model

Click here to download ENSCJAG00000009146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009146	SRRM4	100	95.786	ENSG00000139767	SRRM4	100	95.786	Homo_sapiens
ENSCJAG00000009146	SRRM4	86	85.255	ENSAMEG00000016072	SRRM4	89	89.959	Ailuropoda_melanoleuca
ENSCJAG00000009146	SRRM4	65	52.899	ENSAPLG00000009202	SRRM4	91	53.394	Anas_platyrhynchos
ENSCJAG00000009146	SRRM4	65	45.531	ENSACAG00000004139	SRRM4	88	49.721	Anolis_carolinensis
ENSCJAG00000009146	SRRM4	98	78.667	ENSANAG00000020333	SRRM4	84	89.892	Aotus_nancymaae
ENSCJAG00000009146	SRRM4	85	89.847	ENSBTAG00000008676	SRRM4	87	89.847	Bos_taurus
ENSCJAG00000009146	SRRM4	85	92.500	ENSCAFG00000023113	SRRM4	86	92.529	Canis_familiaris
ENSCJAG00000009146	SRRM4	85	78.077	ENSCAFG00020018665	SRRM4	82	73.784	Canis_lupus_dingo
ENSCJAG00000009146	SRRM4	85	70.968	ENSCHIG00000019151	SRRM4	78	76.728	Capra_hircus
ENSCJAG00000009146	SRRM4	78	92.067	ENSTSYG00000012239	SRRM4	84	92.067	Carlito_syrichta
ENSCJAG00000009146	SRRM4	85	91.188	ENSCPOG00000003544	SRRM4	86	91.188	Cavia_porcellus
ENSCJAG00000009146	SRRM4	100	97.073	ENSCCAG00000022479	SRRM4	100	97.073	Cebus_capucinus
ENSCJAG00000009146	SRRM4	85	96.169	ENSCATG00000036343	SRRM4	85	96.169	Cercocebus_atys
ENSCJAG00000009146	SRRM4	85	92.706	ENSCLAG00000009764	SRRM4	85	92.720	Chinchilla_lanigera
ENSCJAG00000009146	SRRM4	85	95.977	ENSCSAG00000002300	SRRM4	85	95.977	Chlorocebus_sabaeus
ENSCJAG00000009146	SRRM4	85	61.029	ENSCPBG00000012293	SRRM4	88	61.949	Chrysemys_picta_bellii
ENSCJAG00000009146	SRRM4	99	81.538	ENSCANG00000031719	SRRM4	97	81.538	Colobus_angolensis_palliatus
ENSCJAG00000009146	SRRM4	85	84.423	ENSCGRG00001000544	Srrm4	86	86.398	Cricetulus_griseus_chok1gshd
ENSCJAG00000009146	SRRM4	85	79.502	ENSCGRG00000006973	Srrm4	85	78.736	Cricetulus_griseus_crigri
ENSCJAG00000009146	SRRM4	85	88.269	ENSDNOG00000000260	SRRM4	88	88.314	Dasypus_novemcinctus
ENSCJAG00000009146	SRRM4	85	80.497	ENSDORG00000015243	Srrm4	87	80.843	Dipodomys_ordii
ENSCJAG00000009146	SRRM4	84	92.456	ENSEASG00005008759	SRRM4	87	92.529	Equus_asinus_asinus
ENSCJAG00000009146	SRRM4	84	92.263	ENSECAG00000021729	SRRM4	87	92.337	Equus_caballus
ENSCJAG00000009146	SRRM4	84	92.456	ENSFCAG00000010536	SRRM4	84	92.529	Felis_catus
ENSCJAG00000009146	SRRM4	84	88.031	ENSFDAG00000007218	SRRM4	85	89.866	Fukomys_damarensis
ENSCJAG00000009146	SRRM4	58	55.526	ENSGAGG00000017218	SRRM4	82	59.604	Gopherus_agassizii
ENSCJAG00000009146	SRRM4	100	96.110	ENSGGOG00000005338	SRRM4	100	96.110	Gorilla_gorilla
ENSCJAG00000009146	SRRM4	84	92.100	ENSHGLG00000007830	SRRM4	86	92.161	Heterocephalus_glaber_female
ENSCJAG00000009146	SRRM4	77	83.648	ENSHGLG00100008549	SRRM4	62	86.154	Heterocephalus_glaber_male
ENSCJAG00000009146	SRRM4	78	78.661	ENSSTOG00000026642	SRRM4	83	78.706	Ictidomys_tridecemlineatus
ENSCJAG00000009146	SRRM4	82	81.028	ENSJJAG00000016448	Srrm4	82	87.318	Jaculus_jaculus
ENSCJAG00000009146	SRRM4	84	88.224	ENSLAFG00000003731	SRRM4	85	88.123	Loxodonta_africana
ENSCJAG00000009146	SRRM4	85	96.360	ENSMFAG00000041271	SRRM4	84	96.360	Macaca_fascicularis
ENSCJAG00000009146	SRRM4	83	83.012	ENSMMUG00000021230	SRRM4	83	82.115	Macaca_mulatta
ENSCJAG00000009146	SRRM4	85	96.169	ENSMNEG00000044154	SRRM4	85	96.169	Macaca_nemestrina
ENSCJAG00000009146	SRRM4	85	95.977	ENSMLEG00000034455	SRRM4	85	95.977	Mandrillus_leucophaeus
ENSCJAG00000009146	SRRM4	84	59.662	ENSMGAG00000009082	SRRM4	87	62.082	Meleagris_gallopavo
ENSCJAG00000009146	SRRM4	85	83.462	ENSMAUG00000013203	Srrm4	86	85.441	Mesocricetus_auratus
ENSCJAG00000009146	SRRM4	85	93.295	ENSMICG00000012386	SRRM4	85	93.295	Microcebus_murinus
ENSCJAG00000009146	SRRM4	85	82.692	ENSMOCG00000006737	Srrm4	86	85.249	Microtus_ochrogaster
ENSCJAG00000009146	SRRM4	84	57.371	ENSMODG00000015283	SRRM4	90	57.458	Monodelphis_domestica
ENSCJAG00000009146	SRRM4	85	87.308	MGP_CAROLIEiJ_G0027638	Srrm4	85	86.590	Mus_caroli
ENSCJAG00000009146	SRRM4	84	87.091	ENSMUSG00000063919	Srrm4	85	86.398	Mus_musculus
ENSCJAG00000009146	SRRM4	85	85.385	MGP_PahariEiJ_G0024219	Srrm4	86	84.674	Mus_pahari
ENSCJAG00000009146	SRRM4	85	86.923	MGP_SPRETEiJ_G0028637	Srrm4	85	86.207	Mus_spretus
ENSCJAG00000009146	SRRM4	84	92.456	ENSMPUG00000002930	SRRM4	87	92.529	Mustela_putorius_furo
ENSCJAG00000009146	SRRM4	85	89.293	ENSNGAG00000020807	Srrm4	87	89.293	Nannospalax_galili
ENSCJAG00000009146	SRRM4	100	96.434	ENSNLEG00000000200	SRRM4	100	96.434	Nomascus_leucogenys
ENSCJAG00000009146	SRRM4	84	81.905	ENSOPRG00000016981	SRRM4	77	81.321	Ochotona_princeps
ENSCJAG00000009146	SRRM4	85	91.731	ENSODEG00000006291	SRRM4	85	91.762	Octodon_degus
ENSCJAG00000009146	SRRM4	84	88.996	ENSOCUG00000004503	SRRM4	77	89.101	Oryctolagus_cuniculus
ENSCJAG00000009146	SRRM4	85	93.295	ENSOGAG00000015431	SRRM4	85	93.295	Otolemur_garnettii
ENSCJAG00000009146	SRRM4	85	89.655	ENSOARG00000002063	SRRM4	87	89.655	Ovis_aries
ENSCJAG00000009146	SRRM4	93	95.304	ENSPPAG00000028134	SRRM4	100	95.304	Pan_paniscus
ENSCJAG00000009146	SRRM4	84	92.456	ENSPPRG00000002659	SRRM4	84	92.529	Panthera_pardus
ENSCJAG00000009146	SRRM4	54	69.969	ENSPTIG00000011414	SRRM4	62	82.390	Panthera_tigris_altaica
ENSCJAG00000009146	SRRM4	100	95.786	ENSPTRG00000005517	SRRM4	100	95.786	Pan_troglodytes
ENSCJAG00000009146	SRRM4	85	95.977	ENSPANG00000022544	SRRM4	99	95.882	Papio_anubis
ENSCJAG00000009146	SRRM4	85	82.917	ENSPEMG00000001823	Srrm4	86	84.130	Peromyscus_maniculatus_bairdii
ENSCJAG00000009146	SRRM4	50	98.113	ENSPPYG00000005014	SRRM4	83	74.771	Pongo_abelii
ENSCJAG00000009146	SRRM4	78	79.289	ENSPCAG00000016401	SRRM4	69	79.916	Procavia_capensis
ENSCJAG00000009146	SRRM4	85	93.870	ENSPCOG00000013803	SRRM4	87	93.870	Propithecus_coquereli
ENSCJAG00000009146	SRRM4	78	91.004	ENSPVAG00000017487	SRRM4	86	91.004	Pteropus_vampyrus
ENSCJAG00000009146	SRRM4	85	86.731	ENSRNOG00000001141	Srrm4	86	86.015	Rattus_norvegicus
ENSCJAG00000009146	SRRM4	80	83.503	ENSRBIG00000040107	SRRM4	80	84.749	Rhinopithecus_bieti
ENSCJAG00000009146	SRRM4	80	83.503	ENSRROG00000035868	SRRM4	81	84.967	Rhinopithecus_roxellana
ENSCJAG00000009146	SRRM4	85	89.080	ENSSBOG00000035310	SRRM4	85	89.080	Saimiri_boliviensis_boliviensis
ENSCJAG00000009146	SRRM4	77	66.667	ENSSHAG00000017330	SRRM4	88	64.811	Sarcophilus_harrisii
ENSCJAG00000009146	SRRM4	68	84.227	ENSSARG00000012647	SRRM4	84	69.874	Sorex_araneus
ENSCJAG00000009146	SRRM4	85	89.847	ENSSSCG00000009845	SRRM4	85	89.847	Sus_scrofa
ENSCJAG00000009146	SRRM4	63	56.923	ENSTGUG00000009228	SRRM4	91	57.621	Taeniopygia_guttata
ENSCJAG00000009146	SRRM4	85	58.206	ENSVPAG00000007937	SRRM4	67	89.423	Vicugna_pacos
ENSCJAG00000009146	SRRM4	51	92.674	ENSVVUG00000013334	SRRM4	74	92.727	Vulpes_vulpes