EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000009235 (Gene tree)
Gene ID: 100413594
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 59607 bases
Position: chrNTIC01001113.1:27539449-27599055
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000016967	zf-C2H2	PF00096.26	1.2e-33	1	5
ENSCJAP00000016967	zf-C2H2	PF00096.26	1.2e-33	2	5
ENSCJAP00000016967	zf-C2H2	PF00096.26	1.2e-33	3	5
ENSCJAP00000016967	zf-C2H2	PF00096.26	1.2e-33	4	5
ENSCJAP00000016967	zf-C2H2	PF00096.26	1.2e-33	5	5
ENSCJAP00000016976	zf-C2H2	PF00096.26	4e-33	1	5
ENSCJAP00000016976	zf-C2H2	PF00096.26	4e-33	2	5
ENSCJAP00000016976	zf-C2H2	PF00096.26	4e-33	3	5
ENSCJAP00000016976	zf-C2H2	PF00096.26	4e-33	4	5
ENSCJAP00000016976	zf-C2H2	PF00096.26	4e-33	5	5
ENSCJAP00000043302	zf-C2H2	PF00096.26	4.8e-33	1	5
ENSCJAP00000043302	zf-C2H2	PF00096.26	4.8e-33	2	5
ENSCJAP00000043302	zf-C2H2	PF00096.26	4.8e-33	3	5
ENSCJAP00000043302	zf-C2H2	PF00096.26	4.8e-33	4	5
ENSCJAP00000043302	zf-C2H2	PF00096.26	4.8e-33	5	5
ENSCJAP00000016988	zf-C2H2	PF00096.26	5e-33	1	5
ENSCJAP00000016988	zf-C2H2	PF00096.26	5e-33	2	5
ENSCJAP00000016988	zf-C2H2	PF00096.26	5e-33	3	5
ENSCJAP00000016988	zf-C2H2	PF00096.26	5e-33	4	5
ENSCJAP00000016988	zf-C2H2	PF00096.26	5e-33	5	5
ENSCJAP00000016967	zf-met	PF12874.7	5.6e-06	1	2
ENSCJAP00000016967	zf-met	PF12874.7	5.6e-06	2	2
ENSCJAP00000016976	zf-met	PF12874.7	7.9e-06	1	2
ENSCJAP00000016976	zf-met	PF12874.7	7.9e-06	2	2
ENSCJAP00000043302	zf-met	PF12874.7	8.4e-06	1	2
ENSCJAP00000043302	zf-met	PF12874.7	8.4e-06	2	2
ENSCJAP00000016988	zf-met	PF12874.7	8.4e-06	1	2
ENSCJAP00000016988	zf-met	PF12874.7	8.4e-06	2	2
ENSCJAP00000016967	zf-C2H2_jaz	PF12171.8	2.3e-17	1	1
ENSCJAP00000016976	zf-C2H2_jaz	PF12171.8	7.3e-17	1	1
ENSCJAP00000043302	zf-C2H2_jaz	PF12171.8	8.8e-17	1	1
ENSCJAP00000016988	zf-C2H2_jaz	PF12171.8	9.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000017950	PRDM10-203	3408	-	ENSCJAP00000016976	1135 (aa)	-	F7C1N6
ENSCJAT00000059906	PRDM10-201	7027	-	ENSCJAP00000043302	1155 (aa)	-	F7HYK6
ENSCJAT00000017941	PRDM10-204	3069	-	ENSCJAP00000016967	1022 (aa)	-	F7C298
ENSCJAT00000017962	PRDM10-202	3480	-	ENSCJAP00000016988	1159 (aa)	-	F7BLK2

Gene Model

Click here to download ENSCJAG00000009235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009235's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000009235	PRDM10	57	38.389	ENSCJAG00000013815	PRDM15	65	38.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009235	PRDM10	100	98.190	ENSG00000170325	PRDM10	100	98.497	Homo_sapiens
ENSCJAG00000009235	PRDM10	100	91.145	ENSAMEG00000002425	PRDM10	100	91.145	Ailuropoda_melanoleuca
ENSCJAG00000009235	PRDM10	100	85.099	ENSAPLG00000004858	PRDM10	100	85.099	Anas_platyrhynchos
ENSCJAG00000009235	PRDM10	100	90.564	ENSANAG00000022064	PRDM10	100	84.179	Aotus_nancymaae
ENSCJAG00000009235	PRDM10	100	93.701	ENSBTAG00000019001	PRDM10	100	93.725	Bos_taurus
ENSCJAG00000009235	PRDM10	100	93.160	ENSCAFG00000010164	PRDM10	100	93.160	Canis_familiaris
ENSCJAG00000009235	PRDM10	100	92.335	ENSCAFG00020010152	PRDM10	100	92.335	Canis_lupus_dingo
ENSCJAG00000009235	PRDM10	100	94.026	ENSCHIG00000026530	PRDM10	100	93.506	Capra_hircus
ENSCJAG00000009235	PRDM10	100	97.500	ENSTSYG00000000544	PRDM10	100	97.747	Carlito_syrichta
ENSCJAG00000009235	PRDM10	100	86.847	ENSCAPG00000017296	PRDM10	100	86.847	Cavia_aperea
ENSCJAG00000009235	PRDM10	94	86.125	ENSCPOG00000000389	PRDM10	98	86.323	Cavia_porcellus
ENSCJAG00000009235	PRDM10	100	99.310	ENSCCAG00000024567	PRDM10	100	99.310	Cebus_capucinus
ENSCJAG00000009235	PRDM10	100	98.630	ENSCATG00000040031	PRDM10	100	98.630	Cercocebus_atys
ENSCJAG00000009235	PRDM10	100	91.859	ENSCLAG00000014605	PRDM10	99	97.403	Chinchilla_lanigera
ENSCJAG00000009235	PRDM10	100	98.615	ENSCSAG00000002202	PRDM10	100	98.615	Chlorocebus_sabaeus
ENSCJAG00000009235	PRDM10	100	82.681	ENSCPBG00000026880	PRDM10	99	82.407	Chrysemys_picta_bellii
ENSCJAG00000009235	PRDM10	100	98.447	ENSCANG00000032669	PRDM10	100	98.447	Colobus_angolensis_palliatus
ENSCJAG00000009235	PRDM10	100	92.660	ENSCGRG00001021647	Prdm10	98	92.660	Cricetulus_griseus_chok1gshd
ENSCJAG00000009235	PRDM10	100	92.660	ENSCGRG00000006562	Prdm10	98	92.660	Cricetulus_griseus_crigri
ENSCJAG00000009235	PRDM10	86	91.648	ENSDNOG00000001366	PRDM10	95	93.882	Dasypus_novemcinctus
ENSCJAG00000009235	PRDM10	100	94.026	ENSDORG00000014292	Prdm10	100	93.939	Dipodomys_ordii
ENSCJAG00000009235	PRDM10	100	95.152	ENSEASG00005022914	PRDM10	100	95.152	Equus_asinus_asinus
ENSCJAG00000009235	PRDM10	100	95.065	ENSECAG00000011499	PRDM10	100	95.065	Equus_caballus
ENSCJAG00000009235	PRDM10	98	95.234	ENSFCAG00000004111	PRDM10	96	95.234	Felis_catus
ENSCJAG00000009235	PRDM10	100	81.068	ENSFALG00000004873	PRDM10	100	80.651	Ficedula_albicollis
ENSCJAG00000009235	PRDM10	100	91.709	ENSFDAG00000017311	PRDM10	100	91.540	Fukomys_damarensis
ENSCJAG00000009235	PRDM10	100	82.265	ENSGALG00000033660	PRDM10	99	85.484	Gallus_gallus
ENSCJAG00000009235	PRDM10	98	61.708	ENSGACG00000012293	prdm10	98	67.901	Gasterosteus_aculeatus
ENSCJAG00000009235	PRDM10	100	83.962	ENSGAGG00000012523	PRDM10	99	83.962	Gopherus_agassizii
ENSCJAG00000009235	PRDM10	100	98.633	ENSGGOG00000015359	PRDM10	100	98.633	Gorilla_gorilla
ENSCJAG00000009235	PRDM10	100	91.908	ENSHGLG00000001106	PRDM10	100	92.078	Heterocephalus_glaber_female
ENSCJAG00000009235	PRDM10	100	92.235	ENSHGLG00100002350	PRDM10	100	92.406	Heterocephalus_glaber_male
ENSCJAG00000009235	PRDM10	100	96.364	ENSSTOG00000002015	PRDM10	100	96.364	Ictidomys_tridecemlineatus
ENSCJAG00000009235	PRDM10	98	88.345	ENSJJAG00000021493	Prdm10	90	92.901	Jaculus_jaculus
ENSCJAG00000009235	PRDM10	100	91.316	ENSLAFG00000031867	PRDM10	100	91.144	Loxodonta_africana
ENSCJAG00000009235	PRDM10	100	98.728	ENSMFAG00000031008	PRDM10	100	98.728	Macaca_fascicularis
ENSCJAG00000009235	PRDM10	100	98.728	ENSMMUG00000017555	PRDM10	100	98.728	Macaca_mulatta
ENSCJAG00000009235	PRDM10	100	98.630	ENSMNEG00000036493	PRDM10	100	98.630	Macaca_nemestrina
ENSCJAG00000009235	PRDM10	93	98.101	ENSMLEG00000042028	PRDM10	99	98.101	Mandrillus_leucophaeus
ENSCJAG00000009235	PRDM10	100	82.304	ENSMGAG00000001112	PRDM10	100	82.304	Meleagris_gallopavo
ENSCJAG00000009235	PRDM10	100	96.462	ENSMICG00000013888	PRDM10	100	96.462	Microcebus_murinus
ENSCJAG00000009235	PRDM10	100	90.955	ENSMOCG00000021853	Prdm10	100	90.702	Microtus_ochrogaster
ENSCJAG00000009235	PRDM10	77	87.542	ENSMODG00000004979	PRDM10	99	87.656	Monodelphis_domestica
ENSCJAG00000009235	PRDM10	100	91.117	ENSMUSG00000042496	Prdm10	100	91.117	Mus_musculus
ENSCJAG00000009235	PRDM10	100	92.765	MGP_SPRETEiJ_G0033061	-	100	92.765	Mus_spretus
ENSCJAG00000009235	PRDM10	100	94.719	ENSMPUG00000008711	PRDM10	99	94.719	Mustela_putorius_furo
ENSCJAG00000009235	PRDM10	100	93.960	ENSMLUG00000013051	PRDM10	100	93.529	Myotis_lucifugus
ENSCJAG00000009235	PRDM10	100	94.978	ENSNGAG00000000580	Prdm10	100	95.489	Nannospalax_galili
ENSCJAG00000009235	PRDM10	100	98.532	ENSNLEG00000007488	PRDM10	100	98.274	Nomascus_leucogenys
ENSCJAG00000009235	PRDM10	100	90.670	ENSODEG00000005309	PRDM10	97	98.214	Octodon_degus
ENSCJAG00000009235	PRDM10	100	80.835	ENSOANG00000000577	-	100	79.983	Ornithorhynchus_anatinus
ENSCJAG00000009235	PRDM10	100	93.420	ENSOCUG00000003736	PRDM10	100	93.420	Oryctolagus_cuniculus
ENSCJAG00000009235	PRDM10	100	94.823	ENSOGAG00000010723	PRDM10	100	94.478	Otolemur_garnettii
ENSCJAG00000009235	PRDM10	100	93.939	ENSOARG00000014507	PRDM10	100	93.420	Ovis_aries
ENSCJAG00000009235	PRDM10	100	98.633	ENSPPAG00000042881	PRDM10	100	98.633	Pan_paniscus
ENSCJAG00000009235	PRDM10	100	94.737	ENSPPRG00000007002	PRDM10	100	94.737	Panthera_pardus
ENSCJAG00000009235	PRDM10	100	94.651	ENSPTIG00000013331	PRDM10	100	94.651	Panthera_tigris_altaica
ENSCJAG00000009235	PRDM10	100	98.535	ENSPTRG00000004477	PRDM10	100	98.535	Pan_troglodytes
ENSCJAG00000009235	PRDM10	100	98.826	ENSPANG00000017470	PRDM10	100	98.826	Papio_anubis
ENSCJAG00000009235	PRDM10	100	91.582	ENSPEMG00000014985	Prdm10	100	91.241	Peromyscus_maniculatus_bairdii
ENSCJAG00000009235	PRDM10	100	98.616	ENSPPYG00000004061	PRDM10	100	98.616	Pongo_abelii
ENSCJAG00000009235	PRDM10	92	84.967	ENSPCAG00000014514	PRDM10	100	85.247	Procavia_capensis
ENSCJAG00000009235	PRDM10	100	81.888	ENSPCOG00000023406	PRDM10	100	82.530	Propithecus_coquereli
ENSCJAG00000009235	PRDM10	100	94.651	ENSPVAG00000012764	PRDM10	100	94.737	Pteropus_vampyrus
ENSCJAG00000009235	PRDM10	100	92.913	ENSRNOG00000007853	Prdm10	100	92.913	Rattus_norvegicus
ENSCJAG00000009235	PRDM10	100	98.631	ENSRBIG00000030924	PRDM10	100	98.631	Rhinopithecus_bieti
ENSCJAG00000009235	PRDM10	100	98.631	ENSRROG00000034334	PRDM10	100	98.631	Rhinopithecus_roxellana
ENSCJAG00000009235	PRDM10	100	99.138	ENSSBOG00000008773	PRDM10	100	99.138	Saimiri_boliviensis_boliviensis
ENSCJAG00000009235	PRDM10	99	87.177	ENSSHAG00000004503	PRDM10	99	87.263	Sarcophilus_harrisii
ENSCJAG00000009235	PRDM10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSCJAG00000009235	PRDM10	100	82.780	ENSSPUG00000001178	PRDM10	97	85.098	Sphenodon_punctatus
ENSCJAG00000009235	PRDM10	100	92.839	ENSSSCG00000015243	PRDM10	100	93.090	Sus_scrofa
ENSCJAG00000009235	PRDM10	100	83.763	ENSTGUG00000000530	PRDM10	100	83.763	Taeniopygia_guttata
ENSCJAG00000009235	PRDM10	95	94.912	ENSTBEG00000007221	PRDM10	94	94.912	Tupaia_belangeri
ENSCJAG00000009235	PRDM10	100	91.113	ENSTTRG00000009189	PRDM10	100	90.595	Tursiops_truncatus
ENSCJAG00000009235	PRDM10	91	92.790	ENSUAMG00000018832	PRDM10	94	95.188	Ursus_americanus
ENSCJAG00000009235	PRDM10	100	92.472	ENSUMAG00000003167	PRDM10	99	95.085	Ursus_maritimus
ENSCJAG00000009235	PRDM10	100	94.199	ENSVVUG00000019878	PRDM10	100	94.199	Vulpes_vulpes
ENSCJAG00000009235	PRDM10	100	69.141	ENSXETG00000032173	PRDM10	100	69.141	Xenopus_tropicalis