EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000009726 (Gene tree)
Gene ID: 100400557
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 1864 bases
Position: chrNTIC01038834.1:82662537-82664400
Accession: 100400557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000017864	Exo_endo_phos	PF03372.23	4.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000018890	APEX1-201	957	-	ENSCJAP00000017864	318 (aa)	XP_009003906	F7HKI5
ENSCJAT00000081562	APEX1-202	45	-	ENSCJAP00000053812	14 (aa)	-	A0A2R8MS70

Gene Model

Click here to download ENSCJAG00000009726's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009726	APEX1	100	98.428	ENSG00000100823	APEX1	100	98.428	Homo_sapiens
ENSCJAG00000009726	APEX1	88	69.892	ENSAPOG00000017002	apex1	91	69.892	Acanthochromis_polyacanthus
ENSCJAG00000009726	APEX1	100	96.541	ENSAMEG00000005418	APEX1	100	96.541	Ailuropoda_melanoleuca
ENSCJAG00000009726	APEX1	87	71.583	ENSACIG00000010653	apex1	94	71.685	Amphilophus_citrinellus
ENSCJAG00000009726	APEX1	88	69.892	ENSAOCG00000009649	apex1	90	69.892	Amphiprion_ocellaris
ENSCJAG00000009726	APEX1	88	69.892	ENSAPEG00000021453	apex1	90	69.892	Amphiprion_percula
ENSCJAG00000009726	APEX1	99	67.405	ENSATEG00000002883	apex1	97	67.405	Anabas_testudineus
ENSCJAG00000009726	APEX1	100	70.497	ENSACAG00000008099	APEX1	100	70.497	Anolis_carolinensis
ENSCJAG00000009726	APEX1	100	99.371	ENSANAG00000030117	APEX1	100	99.371	Aotus_nancymaae
ENSCJAG00000009726	APEX1	86	72.364	ENSACLG00000018441	apex1	99	67.089	Astatotilapia_calliptera
ENSCJAG00000009726	APEX1	100	65.938	ENSAMXG00000034699	apex1	100	65.938	Astyanax_mexicanus
ENSCJAG00000009726	APEX1	100	94.654	ENSBTAG00000002745	APEX1	100	94.654	Bos_taurus
ENSCJAG00000009726	APEX1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSCJAG00000009726	APEX1	100	96.541	ENSCAFG00000032033	APEX1	100	96.541	Canis_familiaris
ENSCJAG00000009726	APEX1	54	93.605	ENSCAFG00020023002	-	96	93.605	Canis_lupus_dingo
ENSCJAG00000009726	APEX1	100	96.541	ENSCAFG00020014377	-	100	96.541	Canis_lupus_dingo
ENSCJAG00000009726	APEX1	100	94.654	ENSCHIG00000007298	-	100	94.654	Capra_hircus
ENSCJAG00000009726	APEX1	98	75.641	ENSCHIG00000014537	-	99	75.641	Capra_hircus
ENSCJAG00000009726	APEX1	100	95.597	ENSTSYG00000034813	APEX1	100	95.597	Carlito_syrichta
ENSCJAG00000009726	APEX1	85	88.930	ENSCAPG00000016235	APEX1	91	97.881	Cavia_aperea
ENSCJAG00000009726	APEX1	100	95.283	ENSCPOG00000030909	APEX1	100	95.283	Cavia_porcellus
ENSCJAG00000009726	APEX1	100	85.849	ENSCCAG00000031931	-	100	85.849	Cebus_capucinus
ENSCJAG00000009726	APEX1	100	100.000	ENSCCAG00000033056	-	100	100.000	Cebus_capucinus
ENSCJAG00000009726	APEX1	100	98.113	ENSCATG00000015580	APEX1	100	98.113	Cercocebus_atys
ENSCJAG00000009726	APEX1	100	95.283	ENSCLAG00000001002	APEX1	100	95.283	Chinchilla_lanigera
ENSCJAG00000009726	APEX1	100	97.799	ENSCSAG00000016670	-	100	97.799	Chlorocebus_sabaeus
ENSCJAG00000009726	APEX1	100	97.799	ENSCSAG00000016685	-	100	97.799	Chlorocebus_sabaeus
ENSCJAG00000009726	APEX1	100	72.100	ENSCPBG00000009567	APEX1	100	72.100	Chrysemys_picta_bellii
ENSCJAG00000009726	APEX1	93	53.465	ENSCING00000008137	-	84	58.113	Ciona_intestinalis
ENSCJAG00000009726	APEX1	83	51.698	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSCJAG00000009726	APEX1	100	98.113	ENSCANG00000030726	APEX1	100	98.113	Colobus_angolensis_palliatus
ENSCJAG00000009726	APEX1	100	92.453	ENSCGRG00001017046	Apex1	100	92.453	Cricetulus_griseus_chok1gshd
ENSCJAG00000009726	APEX1	100	92.453	ENSCGRG00000008984	Apex1	100	92.453	Cricetulus_griseus_crigri
ENSCJAG00000009726	APEX1	99	65.094	ENSCSEG00000017499	apex1	99	65.094	Cynoglossus_semilaevis
ENSCJAG00000009726	APEX1	99	66.772	ENSCVAG00000022075	apex1	99	66.772	Cyprinodon_variegatus
ENSCJAG00000009726	APEX1	100	66.981	ENSDARG00000045843	apex1	100	66.667	Danio_rerio
ENSCJAG00000009726	APEX1	100	90.252	ENSDNOG00000042234	APEX1	95	90.252	Dasypus_novemcinctus
ENSCJAG00000009726	APEX1	100	95.283	ENSDORG00000001616	Apex1	100	95.283	Dipodomys_ordii
ENSCJAG00000009726	APEX1	100	94.654	ENSETEG00000004855	-	100	94.654	Echinops_telfairi
ENSCJAG00000009726	APEX1	75	65.272	ENSEBUG00000000622	-	92	65.272	Eptatretus_burgeri
ENSCJAG00000009726	APEX1	100	97.170	ENSEASG00005017489	APEX1	74	97.170	Equus_asinus_asinus
ENSCJAG00000009726	APEX1	100	97.170	ENSECAG00000022325	APEX1	82	97.170	Equus_caballus
ENSCJAG00000009726	APEX1	91	93.750	ENSEEUG00000012569	APEX1	100	93.750	Erinaceus_europaeus
ENSCJAG00000009726	APEX1	100	65.723	ENSELUG00000021706	apex1	100	65.723	Esox_lucius
ENSCJAG00000009726	APEX1	100	97.170	ENSFCAG00000030869	APEX1	100	97.170	Felis_catus
ENSCJAG00000009726	APEX1	100	94.340	ENSFDAG00000006120	APEX1	100	94.340	Fukomys_damarensis
ENSCJAG00000009726	APEX1	99	68.354	ENSFHEG00000009031	apex1	83	68.354	Fundulus_heteroclitus
ENSCJAG00000009726	APEX1	99	61.950	ENSGMOG00000007943	apex1	99	61.442	Gadus_morhua
ENSCJAG00000009726	APEX1	88	72.401	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSCJAG00000009726	APEX1	99	65.823	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSCJAG00000009726	APEX1	100	71.787	ENSGAGG00000014999	APEX1	100	71.787	Gopherus_agassizii
ENSCJAG00000009726	APEX1	100	98.742	ENSGGOG00000002128	APEX1	100	98.742	Gorilla_gorilla
ENSCJAG00000009726	APEX1	99	66.456	ENSHBUG00000005894	apex1	99	66.772	Haplochromis_burtoni
ENSCJAG00000009726	APEX1	100	95.283	ENSHGLG00000002848	APEX1	100	95.283	Heterocephalus_glaber_female
ENSCJAG00000009726	APEX1	100	95.283	ENSHGLG00100017878	APEX1	100	95.283	Heterocephalus_glaber_male
ENSCJAG00000009726	APEX1	99	66.352	ENSHCOG00000009961	apex1	89	70.968	Hippocampus_comes
ENSCJAG00000009726	APEX1	100	68.025	ENSIPUG00000005799	apex1	100	67.712	Ictalurus_punctatus
ENSCJAG00000009726	APEX1	100	94.340	ENSSTOG00000010096	APEX1	100	94.340	Ictidomys_tridecemlineatus
ENSCJAG00000009726	APEX1	100	94.654	ENSJJAG00000012067	-	100	94.654	Jaculus_jaculus
ENSCJAG00000009726	APEX1	100	80.818	ENSJJAG00000020465	-	96	84.899	Jaculus_jaculus
ENSCJAG00000009726	APEX1	100	84.906	ENSJJAG00000003660	-	100	84.906	Jaculus_jaculus
ENSCJAG00000009726	APEX1	99	66.772	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSCJAG00000009726	APEX1	88	68.817	ENSLBEG00000010248	apex1	99	64.537	Labrus_bergylta
ENSCJAG00000009726	APEX1	100	67.913	ENSLACG00000008617	APEX1	100	67.296	Latimeria_chalumnae
ENSCJAG00000009726	APEX1	100	67.391	ENSLOCG00000015516	apex1	99	66.355	Lepisosteus_oculatus
ENSCJAG00000009726	APEX1	100	94.969	ENSLAFG00000021872	APEX1	100	94.969	Loxodonta_africana
ENSCJAG00000009726	APEX1	100	97.484	ENSMFAG00000002565	APEX1	100	97.484	Macaca_fascicularis
ENSCJAG00000009726	APEX1	100	97.799	ENSMMUG00000048039	APEX1	100	97.799	Macaca_mulatta
ENSCJAG00000009726	APEX1	100	97.799	ENSMNEG00000036944	APEX1	100	97.799	Macaca_nemestrina
ENSCJAG00000009726	APEX1	100	98.113	ENSMLEG00000042125	APEX1	100	98.113	Mandrillus_leucophaeus
ENSCJAG00000009726	APEX1	99	67.089	ENSMAMG00000023526	apex1	99	67.089	Mastacembelus_armatus
ENSCJAG00000009726	APEX1	86	72.364	ENSMZEG00005014187	apex1	99	67.089	Maylandia_zebra
ENSCJAG00000009726	APEX1	100	93.082	ENSMAUG00000013994	Apex1	100	93.082	Mesocricetus_auratus
ENSCJAG00000009726	APEX1	100	96.226	ENSMICG00000043554	APEX1	100	96.226	Microcebus_murinus
ENSCJAG00000009726	APEX1	100	93.396	ENSMOCG00000013721	Apex1	100	93.396	Microtus_ochrogaster
ENSCJAG00000009726	APEX1	88	67.857	ENSMMOG00000010031	apex1	87	67.857	Mola_mola
ENSCJAG00000009726	APEX1	100	84.062	ENSMODG00000007125	APEX1	100	84.375	Monodelphis_domestica
ENSCJAG00000009726	APEX1	88	64.516	ENSMALG00000011699	apex1	75	64.516	Monopterus_albus
ENSCJAG00000009726	APEX1	99	94.953	MGP_CAROLIEiJ_G0019209	Apex1	99	94.953	Mus_caroli
ENSCJAG00000009726	APEX1	100	95.597	ENSMUSG00000035960	Apex1	100	95.597	Mus_musculus
ENSCJAG00000009726	APEX1	100	95.597	MGP_PahariEiJ_G0030232	Apex1	100	95.597	Mus_pahari
ENSCJAG00000009726	APEX1	100	95.597	MGP_SPRETEiJ_G0020101	Apex1	100	95.597	Mus_spretus
ENSCJAG00000009726	APEX1	100	95.000	ENSMLUG00000028957	APEX1	100	95.000	Myotis_lucifugus
ENSCJAG00000009726	APEX1	100	70.440	ENSNGAG00000021748	-	99	70.440	Nannospalax_galili
ENSCJAG00000009726	APEX1	100	93.711	ENSNGAG00000002725	-	100	93.711	Nannospalax_galili
ENSCJAG00000009726	APEX1	86	72.000	ENSNBRG00000005334	apex1	91	66.772	Neolamprologus_brichardi
ENSCJAG00000009726	APEX1	100	98.113	ENSNLEG00000010839	APEX1	100	98.113	Nomascus_leucogenys
ENSCJAG00000009726	APEX1	100	87.107	ENSMEUG00000014519	APEX1	100	85.893	Notamacropus_eugenii
ENSCJAG00000009726	APEX1	100	94.340	ENSOPRG00000014029	APEX1	100	94.025	Ochotona_princeps
ENSCJAG00000009726	APEX1	97	75.728	ENSODEG00000004777	-	99	75.728	Octodon_degus
ENSCJAG00000009726	APEX1	100	72.531	ENSODEG00000006583	-	100	72.531	Octodon_degus
ENSCJAG00000009726	APEX1	100	95.597	ENSODEG00000001703	-	100	95.597	Octodon_degus
ENSCJAG00000009726	APEX1	87	72.302	ENSONIG00000012089	apex1	99	67.405	Oreochromis_niloticus
ENSCJAG00000009726	APEX1	90	83.158	ENSOANG00000008836	APEX1	80	77.778	Ornithorhynchus_anatinus
ENSCJAG00000009726	APEX1	100	96.226	ENSOCUG00000005022	APEX1	100	96.226	Oryctolagus_cuniculus
ENSCJAG00000009726	APEX1	99	67.296	ENSORLG00000012378	apex1	99	66.981	Oryzias_latipes
ENSCJAG00000009726	APEX1	99	67.296	ENSORLG00020021371	apex1	99	66.981	Oryzias_latipes_hni
ENSCJAG00000009726	APEX1	99	67.296	ENSORLG00015020089	apex1	99	66.981	Oryzias_latipes_hsok
ENSCJAG00000009726	APEX1	99	67.296	ENSOMEG00000018876	apex1	99	67.296	Oryzias_melastigma
ENSCJAG00000009726	APEX1	98	84.615	ENSOGAG00000029355	-	100	84.615	Otolemur_garnettii
ENSCJAG00000009726	APEX1	100	95.283	ENSOGAG00000013335	-	100	95.283	Otolemur_garnettii
ENSCJAG00000009726	APEX1	100	93.711	ENSOARG00000019740	-	100	93.711	Ovis_aries
ENSCJAG00000009726	APEX1	99	79.114	ENSOARG00000014424	-	100	79.114	Ovis_aries
ENSCJAG00000009726	APEX1	97	90.260	ENSOARG00000001876	-	100	90.260	Ovis_aries
ENSCJAG00000009726	APEX1	100	98.742	ENSPPAG00000038760	APEX1	100	98.742	Pan_paniscus
ENSCJAG00000009726	APEX1	100	97.484	ENSPPRG00000011794	APEX1	100	97.484	Panthera_pardus
ENSCJAG00000009726	APEX1	100	97.170	ENSPTIG00000014829	APEX1	100	97.170	Panthera_tigris_altaica
ENSCJAG00000009726	APEX1	100	98.742	ENSPTRG00000006093	APEX1	100	98.742	Pan_troglodytes
ENSCJAG00000009726	APEX1	100	98.113	ENSPANG00000022757	APEX1	100	98.113	Papio_anubis
ENSCJAG00000009726	APEX1	87	69.314	ENSPKIG00000003504	apex1	100	64.798	Paramormyrops_kingsleyae
ENSCJAG00000009726	APEX1	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSCJAG00000009726	APEX1	100	94.969	ENSPEMG00000019097	Apex1	100	94.969	Peromyscus_maniculatus_bairdii
ENSCJAG00000009726	APEX1	94	66.667	ENSPMAG00000007275	-	95	69.039	Petromyzon_marinus
ENSCJAG00000009726	APEX1	100	84.326	ENSPCIG00000023274	APEX1	100	84.424	Phascolarctos_cinereus
ENSCJAG00000009726	APEX1	88	72.760	ENSPFOG00000004178	apex1	90	72.760	Poecilia_formosa
ENSCJAG00000009726	APEX1	88	72.401	ENSPLAG00000012779	apex1	90	72.401	Poecilia_latipinna
ENSCJAG00000009726	APEX1	88	72.760	ENSPMEG00000019623	apex1	90	72.760	Poecilia_mexicana
ENSCJAG00000009726	APEX1	88	72.043	ENSPREG00000014298	apex1	89	72.043	Poecilia_reticulata
ENSCJAG00000009726	APEX1	100	98.113	ENSPPYG00000005565	APEX1	100	98.113	Pongo_abelii
ENSCJAG00000009726	APEX1	100	93.082	ENSPCAG00000010376	APEX1	100	93.082	Procavia_capensis
ENSCJAG00000009726	APEX1	100	96.226	ENSPCOG00000021564	APEX1	100	96.226	Propithecus_coquereli
ENSCJAG00000009726	APEX1	100	95.938	ENSPVAG00000010736	APEX1	100	95.938	Pteropus_vampyrus
ENSCJAG00000009726	APEX1	86	72.364	ENSPNYG00000023940	apex1	99	67.089	Pundamilia_nyererei
ENSCJAG00000009726	APEX1	93	65.878	ENSPNAG00000020897	apex1	96	65.763	Pygocentrus_nattereri
ENSCJAG00000009726	APEX1	100	94.654	ENSRNOG00000009663	Apex1	100	94.654	Rattus_norvegicus
ENSCJAG00000009726	APEX1	100	98.113	ENSRBIG00000038325	APEX1	99	98.113	Rhinopithecus_bieti
ENSCJAG00000009726	APEX1	100	83.962	ENSSBOG00000031372	-	100	83.810	Saimiri_boliviensis_boliviensis
ENSCJAG00000009726	APEX1	100	99.686	ENSSBOG00000018921	-	100	99.686	Saimiri_boliviensis_boliviensis
ENSCJAG00000009726	APEX1	100	84.259	ENSSHAG00000013524	APEX1	100	84.259	Sarcophilus_harrisii
ENSCJAG00000009726	APEX1	100	63.208	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSCJAG00000009726	APEX1	87	70.144	ENSSMAG00000013348	apex1	99	66.246	Scophthalmus_maximus
ENSCJAG00000009726	APEX1	99	65.823	ENSSDUG00000016377	apex1	99	65.823	Seriola_dumerili
ENSCJAG00000009726	APEX1	99	66.456	ENSSLDG00000023005	apex1	99	66.456	Seriola_lalandi_dorsalis
ENSCJAG00000009726	APEX1	89	73.239	ENSSPUG00000000531	APEX1	96	73.239	Sphenodon_punctatus
ENSCJAG00000009726	APEX1	99	65.506	ENSSPAG00000000458	apex1	99	65.506	Stegastes_partitus
ENSCJAG00000009726	APEX1	96	56.452	ENSSSCG00000039705	-	92	59.859	Sus_scrofa
ENSCJAG00000009726	APEX1	100	95.283	ENSSSCG00000040060	-	100	95.283	Sus_scrofa
ENSCJAG00000009726	APEX1	74	61.017	ENSTGUG00000014378	APEX1	100	61.017	Taeniopygia_guttata
ENSCJAG00000009726	APEX1	87	68.345	ENSTRUG00000004268	apex1	95	64.241	Takifugu_rubripes
ENSCJAG00000009726	APEX1	99	64.241	ENSTNIG00000005778	apex1	99	64.241	Tetraodon_nigroviridis
ENSCJAG00000009726	APEX1	100	92.138	ENSTBEG00000006405	APEX1	100	92.138	Tupaia_belangeri
ENSCJAG00000009726	APEX1	74	95.763	ENSTTRG00000007860	APEX1	100	95.763	Tursiops_truncatus
ENSCJAG00000009726	APEX1	100	96.226	ENSUAMG00000010457	APEX1	100	96.226	Ursus_americanus
ENSCJAG00000009726	APEX1	100	96.226	ENSUMAG00000009178	APEX1	100	96.226	Ursus_maritimus
ENSCJAG00000009726	APEX1	74	91.102	ENSVPAG00000005083	APEX1	100	91.102	Vicugna_pacos
ENSCJAG00000009726	APEX1	100	95.912	ENSVVUG00000009010	APEX1	100	95.912	Vulpes_vulpes
ENSCJAG00000009726	APEX1	100	66.771	ENSXETG00000024773	apex1	100	66.771	Xenopus_tropicalis
ENSCJAG00000009726	APEX1	88	72.401	ENSXCOG00000015233	apex1	99	67.722	Xiphophorus_couchianus
ENSCJAG00000009726	APEX1	100	67.296	ENSXMAG00000006195	apex1	99	67.722	Xiphophorus_maculatus