EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000009803 (Gene tree)
Gene ID: 100397021
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 64974 bases
Position: chrNTIC01035500.1:17807306-17872279
Accession: 1058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000046369	HRDC	PF00570.23	5.3e-12	1	1
ENSCJAP00000018113	BDHCT	PF08072.11	5.2e-19	1	1
ENSCJAP00000046369	BDHCT	PF08072.11	5.9e-19	1	1
ENSCJAP00000046369	DEAD	PF00270.29	2.1e-19	1	1
ENSCJAP00000018113	DEAD	PF00270.29	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000019143	BLM-202	3855	-	ENSCJAP00000018113	1284 (aa)	-	F7ES97
ENSCJAT00000060029	BLM-201	5234	-	ENSCJAP00000046369	1415 (aa)	-	F7HZ92

Gene Model

Click here to download ENSCJAG00000009803's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03440	Homologous recombination	KEGG
cjc03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009803	BLM	100	92.616	ENSG00000197299	BLM	100	92.731	Homo_sapiens
ENSCJAG00000009803	BLM	100	81.377	ENSAMEG00000013843	BLM	100	81.307	Ailuropoda_melanoleuca
ENSCJAG00000009803	BLM	50	74.433	ENSACIG00000023762	blm	56	65.557	Amphilophus_citrinellus
ENSCJAG00000009803	BLM	50	73.361	ENSAOCG00000003318	blm	57	65.947	Amphiprion_ocellaris
ENSCJAG00000009803	BLM	50	73.156	ENSAPEG00000018105	blm	56	65.693	Amphiprion_percula
ENSCJAG00000009803	BLM	82	74.385	ENSATEG00000006421	blm	60	66.540	Anabas_testudineus
ENSCJAG00000009803	BLM	81	58.575	ENSAPLG00000006878	BLM	96	59.212	Anas_platyrhynchos
ENSCJAG00000009803	BLM	56	80.000	ENSACAG00000014275	BLM	60	71.775	Anolis_carolinensis
ENSCJAG00000009803	BLM	100	96.116	ENSANAG00000038415	BLM	100	96.116	Aotus_nancymaae
ENSCJAG00000009803	BLM	87	69.853	ENSACLG00000020354	blm	74	53.088	Astatotilapia_calliptera
ENSCJAG00000009803	BLM	56	68.402	ENSAMXG00000016970	blm	59	63.605	Astyanax_mexicanus
ENSCJAG00000009803	BLM	93	81.908	ENSBTAG00000020301	BLM	100	82.392	Bos_taurus
ENSCJAG00000009803	BLM	100	81.805	ENSCAFG00000012385	BLM	100	81.876	Canis_familiaris
ENSCJAG00000009803	BLM	100	81.664	ENSCAFG00020016111	BLM	94	90.761	Canis_lupus_dingo
ENSCJAG00000009803	BLM	100	80.423	ENSCHIG00000010329	BLM	100	80.731	Capra_hircus
ENSCJAG00000009803	BLM	100	85.402	ENSTSYG00000012368	BLM	100	85.190	Carlito_syrichta
ENSCJAG00000009803	BLM	86	84.971	ENSCAPG00000017976	BLM	99	84.971	Cavia_aperea
ENSCJAG00000009803	BLM	100	77.942	ENSCPOG00000001761	BLM	100	78.013	Cavia_porcellus
ENSCJAG00000009803	BLM	100	94.774	ENSCCAG00000023069	BLM	100	94.774	Cebus_capucinus
ENSCJAG00000009803	BLM	100	92.705	ENSCATG00000040609	BLM	100	92.705	Cercocebus_atys
ENSCJAG00000009803	BLM	100	78.858	ENSCLAG00000012111	BLM	100	78.858	Chinchilla_lanigera
ENSCJAG00000009803	BLM	100	91.961	ENSCSAG00000017040	BLM	100	91.719	Chlorocebus_sabaeus
ENSCJAG00000009803	BLM	87	93.798	ENSCHOG00000006255	BLM	80	93.798	Choloepus_hoffmanni
ENSCJAG00000009803	BLM	89	55.641	ENSCPBG00000025000	BLM	98	59.768	Chrysemys_picta_bellii
ENSCJAG00000009803	BLM	88	83.200	ENSCANG00000034808	BLM	100	97.778	Colobus_angolensis_palliatus
ENSCJAG00000009803	BLM	100	77.989	ENSCGRG00001024897	Blm	100	77.778	Cricetulus_griseus_chok1gshd
ENSCJAG00000009803	BLM	74	73.306	ENSCGRG00000016261	Blm	97	74.035	Cricetulus_griseus_crigri
ENSCJAG00000009803	BLM	89	48.382	ENSCSEG00000013483	blm	82	52.867	Cynoglossus_semilaevis
ENSCJAG00000009803	BLM	50	73.975	ENSDARG00000077089	blm	56	65.992	Danio_rerio
ENSCJAG00000009803	BLM	99	80.589	ENSDNOG00000010159	BLM	99	80.519	Dasypus_novemcinctus
ENSCJAG00000009803	BLM	74	80.574	ENSDORG00000011033	Blm	100	80.287	Dipodomys_ordii
ENSCJAG00000009803	BLM	85	84.034	ENSETEG00000015019	BLM	77	84.034	Echinops_telfairi
ENSCJAG00000009803	BLM	100	81.100	ENSEASG00005006727	BLM	100	81.087	Equus_asinus_asinus
ENSCJAG00000009803	BLM	100	83.089	ENSECAG00000011405	BLM	100	83.077	Equus_caballus
ENSCJAG00000009803	BLM	98	74.837	ENSEEUG00000001434	BLM	98	74.620	Erinaceus_europaeus
ENSCJAG00000009803	BLM	82	75.410	ENSELUG00000019098	blm	78	54.537	Esox_lucius
ENSCJAG00000009803	BLM	100	80.282	ENSFCAG00000006087	BLM	100	80.211	Felis_catus
ENSCJAG00000009803	BLM	89	52.252	ENSFALG00000010981	BLM	89	55.990	Ficedula_albicollis
ENSCJAG00000009803	BLM	93	91.561	ENSFDAG00000012658	BLM	98	86.226	Fukomys_damarensis
ENSCJAG00000009803	BLM	57	66.373	ENSFHEG00000002553	blm	75	53.625	Fundulus_heteroclitus
ENSCJAG00000009803	BLM	82	71.959	ENSGMOG00000016431	blm	89	61.323	Gadus_morhua
ENSCJAG00000009803	BLM	99	50.101	ENSGALG00000008256	BLM	85	68.937	Gallus_gallus
ENSCJAG00000009803	BLM	54	73.770	ENSGAFG00000001117	blm	63	65.685	Gambusia_affinis
ENSCJAG00000009803	BLM	58	74.180	ENSGACG00000010863	blm	100	73.913	Gasterosteus_aculeatus
ENSCJAG00000009803	BLM	64	63.497	ENSGAGG00000005383	BLM	94	63.250	Gopherus_agassizii
ENSCJAG00000009803	BLM	100	92.520	ENSGGOG00000007710	BLM	100	92.585	Gorilla_gorilla
ENSCJAG00000009803	BLM	87	69.669	ENSHBUG00000015943	blm	60	63.464	Haplochromis_burtoni
ENSCJAG00000009803	BLM	100	81.113	ENSHGLG00000013231	BLM	99	81.113	Heterocephalus_glaber_female
ENSCJAG00000009803	BLM	71	57.124	ENSHCOG00000011455	blm	99	54.406	Hippocampus_comes
ENSCJAG00000009803	BLM	74	55.661	ENSIPUG00000000529	blm	68	65.306	Ictalurus_punctatus
ENSCJAG00000009803	BLM	100	81.435	ENSSTOG00000005000	BLM	100	81.927	Ictidomys_tridecemlineatus
ENSCJAG00000009803	BLM	66	85.443	ENSJJAG00000016322	Blm	94	86.551	Jaculus_jaculus
ENSCJAG00000009803	BLM	67	65.646	ENSKMAG00000016608	blm	84	54.322	Kryptolebias_marmoratus
ENSCJAG00000009803	BLM	55	74.864	ENSLACG00000006490	BLM	99	51.708	Latimeria_chalumnae
ENSCJAG00000009803	BLM	79	51.489	ENSLOCG00000014302	blm	76	54.428	Lepisosteus_oculatus
ENSCJAG00000009803	BLM	100	92.883	ENSMFAG00000042982	BLM	100	92.883	Macaca_fascicularis
ENSCJAG00000009803	BLM	100	92.883	ENSMMUG00000019526	BLM	100	92.883	Macaca_mulatta
ENSCJAG00000009803	BLM	99	88.185	ENSMNEG00000031251	BLM	92	97.844	Macaca_nemestrina
ENSCJAG00000009803	BLM	100	89.979	ENSMLEG00000032934	BLM	100	90.120	Mandrillus_leucophaeus
ENSCJAG00000009803	BLM	65	68.794	ENSMAMG00000008726	blm	60	63.934	Mastacembelus_armatus
ENSCJAG00000009803	BLM	87	69.669	ENSMZEG00005022323	blm	79	53.050	Maylandia_zebra
ENSCJAG00000009803	BLM	100	78.105	ENSMAUG00000008953	Blm	99	77.684	Mesocricetus_auratus
ENSCJAG00000009803	BLM	100	85.785	ENSMICG00000034442	BLM	100	85.996	Microcebus_murinus
ENSCJAG00000009803	BLM	100	75.546	ENSMOCG00000016367	Blm	99	75.476	Microtus_ochrogaster
ENSCJAG00000009803	BLM	83	60.465	ENSMMOG00000006959	blm	60	62.456	Mola_mola
ENSCJAG00000009803	BLM	99	63.717	ENSMODG00000019449	BLM	99	64.218	Monodelphis_domestica
ENSCJAG00000009803	BLM	72	68.149	ENSMALG00000007323	blm	63	63.337	Monopterus_albus
ENSCJAG00000009803	BLM	100	74.420	MGP_CAROLIEiJ_G0029907	Blm	100	73.999	Mus_caroli
ENSCJAG00000009803	BLM	100	74.825	ENSMUSG00000030528	Blm	100	74.545	Mus_musculus
ENSCJAG00000009803	BLM	100	75.615	MGP_PahariEiJ_G0013129	Blm	100	74.842	Mus_pahari
ENSCJAG00000009803	BLM	100	75.105	MGP_SPRETEiJ_G0031009	Blm	100	74.755	Mus_spretus
ENSCJAG00000009803	BLM	87	79.492	ENSMPUG00000015657	BLM	99	79.801	Mustela_putorius_furo
ENSCJAG00000009803	BLM	100	79.213	ENSMLUG00000014697	BLM	100	79.354	Myotis_lucifugus
ENSCJAG00000009803	BLM	100	79.070	ENSNGAG00000001275	Blm	100	79.211	Nannospalax_galili
ENSCJAG00000009803	BLM	82	75.464	ENSNBRG00000019702	blm	61	66.453	Neolamprologus_brichardi
ENSCJAG00000009803	BLM	100	91.037	ENSNLEG00000012087	BLM	100	91.179	Nomascus_leucogenys
ENSCJAG00000009803	BLM	99	60.559	ENSMEUG00000007253	BLM	99	61.049	Notamacropus_eugenii
ENSCJAG00000009803	BLM	95	93.287	ENSOPRG00000011667	BLM	95	86.288	Ochotona_princeps
ENSCJAG00000009803	BLM	74	78.695	ENSODEG00000015373	BLM	100	78.695	Octodon_degus
ENSCJAG00000009803	BLM	55	69.725	ENSONIG00000015193	blm	77	52.668	Oreochromis_niloticus
ENSCJAG00000009803	BLM	54	82.031	ENSOANG00000009316	-	99	82.031	Ornithorhynchus_anatinus
ENSCJAG00000009803	BLM	99	74.824	ENSOCUG00000013969	BLM	99	74.542	Oryctolagus_cuniculus
ENSCJAG00000009803	BLM	60	73.975	ENSORLG00000008110	blm	57	67.263	Oryzias_latipes
ENSCJAG00000009803	BLM	60	73.770	ENSORLG00020004812	blm	57	67.391	Oryzias_latipes_hni
ENSCJAG00000009803	BLM	60	74.180	ENSORLG00015018640	blm	57	67.647	Oryzias_latipes_hsok
ENSCJAG00000009803	BLM	63	73.361	ENSOMEG00000023545	blm	57	65.813	Oryzias_melastigma
ENSCJAG00000009803	BLM	100	79.769	ENSOGAG00000005708	BLM	100	77.817	Otolemur_garnettii
ENSCJAG00000009803	BLM	100	79.763	ENSOARG00000012875	BLM	100	79.693	Ovis_aries
ENSCJAG00000009803	BLM	100	92.616	ENSPPAG00000032173	BLM	100	92.616	Pan_paniscus
ENSCJAG00000009803	BLM	100	80.070	ENSPPRG00000002471	BLM	100	80.000	Panthera_pardus
ENSCJAG00000009803	BLM	100	79.747	ENSPTIG00000016168	BLM	100	79.677	Panthera_tigris_altaica
ENSCJAG00000009803	BLM	100	92.349	ENSPTRG00000007460	BLM	100	92.349	Pan_troglodytes
ENSCJAG00000009803	BLM	100	93.060	ENSPANG00000018572	BLM	100	93.060	Papio_anubis
ENSCJAG00000009803	BLM	87	69.174	ENSPKIG00000008954	blm	59	63.830	Paramormyrops_kingsleyae
ENSCJAG00000009803	BLM	52	67.075	ENSPMGG00000006629	blm	81	67.211	Periophthalmus_magnuspinnatus
ENSCJAG00000009803	BLM	100	77.567	ENSPEMG00000017348	Blm	100	77.215	Peromyscus_maniculatus_bairdii
ENSCJAG00000009803	BLM	50	59.161	ENSPMAG00000000445	blm	96	59.441	Petromyzon_marinus
ENSCJAG00000009803	BLM	99	62.918	ENSPCIG00000006609	BLM	99	63.327	Phascolarctos_cinereus
ENSCJAG00000009803	BLM	54	73.975	ENSPFOG00000005059	blm	75	53.585	Poecilia_formosa
ENSCJAG00000009803	BLM	54	73.975	ENSPLAG00000017344	blm	59	65.641	Poecilia_latipinna
ENSCJAG00000009803	BLM	50	73.975	ENSPMEG00000000321	blm	56	66.026	Poecilia_mexicana
ENSCJAG00000009803	BLM	50	73.566	ENSPREG00000007715	blm	76	52.233	Poecilia_reticulata
ENSCJAG00000009803	BLM	100	90.261	ENSPPYG00000006784	BLM	100	90.332	Pongo_abelii
ENSCJAG00000009803	BLM	73	96.970	ENSPCAG00000008960	BLM	73	96.970	Procavia_capensis
ENSCJAG00000009803	BLM	100	80.838	ENSPCOG00000000439	BLM	100	80.465	Propithecus_coquereli
ENSCJAG00000009803	BLM	82	100.000	ENSPVAG00000011642	BLM	88	94.569	Pteropus_vampyrus
ENSCJAG00000009803	BLM	59	51.943	ENSPNYG00000010956	blm	72	44.526	Pundamilia_nyererei
ENSCJAG00000009803	BLM	57	68.959	ENSPNAG00000011714	blm	59	65.366	Pygocentrus_nattereri
ENSCJAG00000009803	BLM	100	73.892	ENSRNOG00000011213	Blm	100	73.610	Rattus_norvegicus
ENSCJAG00000009803	BLM	100	89.485	ENSRBIG00000029656	BLM	100	92.994	Rhinopithecus_bieti
ENSCJAG00000009803	BLM	100	91.743	ENSRROG00000037871	BLM	100	91.602	Rhinopithecus_roxellana
ENSCJAG00000009803	BLM	100	95.486	ENSSBOG00000030957	BLM	100	95.486	Saimiri_boliviensis_boliviensis
ENSCJAG00000009803	BLM	99	63.352	ENSSHAG00000007988	BLM	99	63.839	Sarcophilus_harrisii
ENSCJAG00000009803	BLM	50	73.347	ENSSFOG00015015462	blm	63	64.549	Scleropages_formosus
ENSCJAG00000009803	BLM	54	73.770	ENSSMAG00000001120	blm	99	45.933	Scophthalmus_maximus
ENSCJAG00000009803	BLM	83	50.609	ENSSDUG00000010955	blm	99	46.081	Seriola_dumerili
ENSCJAG00000009803	BLM	99	47.023	ENSSLDG00000000634	blm	99	46.445	Seriola_lalandi_dorsalis
ENSCJAG00000009803	BLM	93	73.494	ENSSARG00000006398	BLM	99	70.166	Sorex_araneus
ENSCJAG00000009803	BLM	74	59.772	ENSSPUG00000000013	BLM	93	59.470	Sphenodon_punctatus
ENSCJAG00000009803	BLM	50	73.156	ENSSPAG00000013999	blm	55	65.605	Stegastes_partitus
ENSCJAG00000009803	BLM	100	82.180	ENSSSCG00000001816	BLM	99	82.520	Sus_scrofa
ENSCJAG00000009803	BLM	80	50.935	ENSTRUG00000019860	blm	76	53.059	Takifugu_rubripes
ENSCJAG00000009803	BLM	84	51.832	ENSTNIG00000019246	blm	63	64.631	Tetraodon_nigroviridis
ENSCJAG00000009803	BLM	77	88.745	ENSTBEG00000006706	BLM	81	82.042	Tupaia_belangeri
ENSCJAG00000009803	BLM	100	83.169	ENSTTRG00000016386	BLM	100	82.958	Tursiops_truncatus
ENSCJAG00000009803	BLM	100	81.351	ENSUMAG00000009105	BLM	97	91.792	Ursus_maritimus
ENSCJAG00000009803	BLM	100	79.718	ENSVPAG00000000085	BLM	100	80.141	Vicugna_pacos
ENSCJAG00000009803	BLM	100	80.643	ENSVVUG00000006402	BLM	100	80.713	Vulpes_vulpes
ENSCJAG00000009803	BLM	99	50.741	ENSXETG00000007847	blm	86	72.165	Xenopus_tropicalis
ENSCJAG00000009803	BLM	50	68.033	ENSXCOG00000020227	blm	74	50.642	Xiphophorus_couchianus
ENSCJAG00000009803	BLM	50	73.156	ENSXMAG00000002951	blm	76	54.024	Xiphophorus_maculatus