EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000009807 (Gene tree)
Gene ID: 100405115
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 110772 bases
Position: chrNTIC01034389.1:65960786-66071557
Accession: 100405115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000017997	zf-C2H2_jaz	PF12171.8	3.7e-06	1	1
ENSCJAP00000017990	zf-C2H2_jaz	PF12171.8	3.7e-06	1	1
ENSCJAP00000017997	G-patch	PF01585.23	3.5e-13	1	1
ENSCJAP00000017990	G-patch	PF01585.23	3.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000019017	GPATCH8-201	7078	XM_003732922	ENSCJAP00000017990	1501 (aa)	XP_003732970	F7I4Y4
ENSCJAT00000019025	GPATCH8-202	4497	-	ENSCJAP00000017997	1498 (aa)	-	F7I4X3

Gene Model

Click here to download ENSCJAG00000009807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009807	GPATCH8	100	97.004	ENSG00000186566	GPATCH8	100	97.004	Homo_sapiens
ENSCJAG00000009807	GPATCH8	100	92.420	ENSAMEG00000018376	GPATCH8	99	92.814	Ailuropoda_melanoleuca
ENSCJAG00000009807	GPATCH8	99	67.442	ENSAPLG00000003095	GPATCH8	54	64.927	Anas_platyrhynchos
ENSCJAG00000009807	GPATCH8	100	98.135	ENSANAG00000032773	GPATCH8	100	98.135	Aotus_nancymaae
ENSCJAG00000009807	GPATCH8	100	91.722	ENSBTAG00000038316	GPATCH8	100	90.927	Bos_taurus
ENSCJAG00000009807	GPATCH8	100	93.085	ENSCAFG00000014136	GPATCH8	100	93.085	Canis_familiaris
ENSCJAG00000009807	GPATCH8	99	93.025	ENSCAFG00020009830	GPATCH8	99	93.025	Canis_lupus_dingo
ENSCJAG00000009807	GPATCH8	99	91.561	ENSCHIG00000008962	GPATCH8	99	90.970	Capra_hircus
ENSCJAG00000009807	GPATCH8	100	87.118	ENSTSYG00000033153	GPATCH8	100	85.525	Carlito_syrichta
ENSCJAG00000009807	GPATCH8	99	76.013	ENSCAPG00000004450	GPATCH8	88	88.593	Cavia_aperea
ENSCJAG00000009807	GPATCH8	99	76.502	ENSCPOG00000039068	GPATCH8	89	88.593	Cavia_porcellus
ENSCJAG00000009807	GPATCH8	100	97.870	ENSCCAG00000030686	GPATCH8	100	97.870	Cebus_capucinus
ENSCJAG00000009807	GPATCH8	100	97.402	ENSCATG00000028156	GPATCH8	100	97.402	Cercocebus_atys
ENSCJAG00000009807	GPATCH8	100	97.069	ENSCSAG00000003586	GPATCH8	100	97.069	Chlorocebus_sabaeus
ENSCJAG00000009807	GPATCH8	100	69.488	ENSCPBG00000008955	GPATCH8	100	69.317	Chrysemys_picta_bellii
ENSCJAG00000009807	GPATCH8	100	96.804	ENSCANG00000039731	GPATCH8	100	96.804	Colobus_angolensis_palliatus
ENSCJAG00000009807	GPATCH8	100	88.286	ENSCGRG00001020210	Gpatch8	100	87.219	Cricetulus_griseus_chok1gshd
ENSCJAG00000009807	GPATCH8	100	88.286	ENSCGRG00000017090	Gpatch8	100	87.219	Cricetulus_griseus_crigri
ENSCJAG00000009807	GPATCH8	100	89.795	ENSDNOG00000005102	GPATCH8	100	88.999	Dasypus_novemcinctus
ENSCJAG00000009807	GPATCH8	100	90.927	ENSDORG00000027664	Gpatch8	100	89.801	Dipodomys_ordii
ENSCJAG00000009807	GPATCH8	100	86.019	ENSETEG00000001325	GPATCH8	100	85.885	Echinops_telfairi
ENSCJAG00000009807	GPATCH8	67	47.690	ENSEBUG00000005749	gpatch8	59	54.430	Eptatretus_burgeri
ENSCJAG00000009807	GPATCH8	100	93.014	ENSEASG00005010264	GPATCH8	92	92.748	Equus_asinus_asinus
ENSCJAG00000009807	GPATCH8	100	92.947	ENSECAG00000040232	GPATCH8	99	92.681	Equus_caballus
ENSCJAG00000009807	GPATCH8	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
ENSCJAG00000009807	GPATCH8	55	91.817	ENSFCAG00000043334	GPATCH8	56	91.817	Felis_catus
ENSCJAG00000009807	GPATCH8	99	66.622	ENSFALG00000009554	GPATCH8	54	64.000	Ficedula_albicollis
ENSCJAG00000009807	GPATCH8	99	64.224	ENSGALG00000041556	GPATCH8	54	61.389	Gallus_gallus
ENSCJAG00000009807	GPATCH8	100	68.861	ENSGAGG00000008358	GPATCH8	54	65.066	Gopherus_agassizii
ENSCJAG00000009807	GPATCH8	100	94.874	ENSGGOG00000013860	GPATCH8	100	94.874	Gorilla_gorilla
ENSCJAG00000009807	GPATCH8	100	75.447	ENSHGLG00000017687	GPATCH8	55	69.607	Heterocephalus_glaber_female
ENSCJAG00000009807	GPATCH8	76	76.683	ENSHGLG00100010738	GPATCH8	98	76.683	Heterocephalus_glaber_male
ENSCJAG00000009807	GPATCH8	100	92.497	ENSSTOG00000025022	GPATCH8	100	92.165	Ictidomys_tridecemlineatus
ENSCJAG00000009807	GPATCH8	100	89.257	ENSJJAG00000017797	Gpatch8	100	88.064	Jaculus_jaculus
ENSCJAG00000009807	GPATCH8	100	57.980	ENSLACG00000017530	GPATCH8	55	55.882	Latimeria_chalumnae
ENSCJAG00000009807	GPATCH8	85	89.701	ENSLAFG00000032250	GPATCH8	100	89.623	Loxodonta_africana
ENSCJAG00000009807	GPATCH8	100	97.202	ENSMFAG00000039126	GPATCH8	100	97.202	Macaca_fascicularis
ENSCJAG00000009807	GPATCH8	100	97.202	ENSMMUG00000012658	GPATCH8	100	97.202	Macaca_mulatta
ENSCJAG00000009807	GPATCH8	100	97.069	ENSMNEG00000031426	GPATCH8	100	97.069	Macaca_nemestrina
ENSCJAG00000009807	GPATCH8	100	97.268	ENSMLEG00000038860	GPATCH8	100	97.268	Mandrillus_leucophaeus
ENSCJAG00000009807	GPATCH8	100	88.867	ENSMAUG00000021770	Gpatch8	100	87.674	Mesocricetus_auratus
ENSCJAG00000009807	GPATCH8	100	92.543	ENSMICG00000028586	GPATCH8	100	94.141	Microcebus_murinus
ENSCJAG00000009807	GPATCH8	100	87.839	ENSMOCG00000001658	Gpatch8	100	87.773	Microtus_ochrogaster
ENSCJAG00000009807	GPATCH8	100	82.131	ENSMODG00000011442	GPATCH8	100	81.403	Monodelphis_domestica
ENSCJAG00000009807	GPATCH8	100	88.757	MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.492	Mus_caroli
ENSCJAG00000009807	GPATCH8	100	88.882	ENSMUSG00000034621	Gpatch8	100	87.756	Mus_musculus
ENSCJAG00000009807	GPATCH8	100	88.654	MGP_PahariEiJ_G0018385	Gpatch8	100	87.731	Mus_pahari
ENSCJAG00000009807	GPATCH8	100	88.391	MGP_SPRETEiJ_G0018098	Gpatch8	100	87.467	Mus_spretus
ENSCJAG00000009807	GPATCH8	100	92.287	ENSMPUG00000009274	GPATCH8	100	91.955	Mustela_putorius_furo
ENSCJAG00000009807	GPATCH8	93	95.270	ENSMLUG00000013840	GPATCH8	99	95.918	Myotis_lucifugus
ENSCJAG00000009807	GPATCH8	100	90.404	ENSNGAG00000021860	Gpatch8	100	89.874	Nannospalax_galili
ENSCJAG00000009807	GPATCH8	77	77.920	ENSMEUG00000011799	GPATCH8	100	78.261	Notamacropus_eugenii
ENSCJAG00000009807	GPATCH8	100	82.690	ENSOPRG00000008816	GPATCH8	100	82.690	Ochotona_princeps
ENSCJAG00000009807	GPATCH8	100	90.220	ENSOCUG00000003291	GPATCH8	100	90.153	Oryctolagus_cuniculus
ENSCJAG00000009807	GPATCH8	98	92.476	ENSOGAG00000033643	GPATCH8	100	93.912	Otolemur_garnettii
ENSCJAG00000009807	GPATCH8	100	86.008	ENSOARG00000008370	GPATCH8	100	86.870	Ovis_aries
ENSCJAG00000009807	GPATCH8	100	96.937	ENSPPAG00000040523	GPATCH8	100	96.937	Pan_paniscus
ENSCJAG00000009807	GPATCH8	100	92.952	ENSPPRG00000023310	GPATCH8	100	92.952	Panthera_pardus
ENSCJAG00000009807	GPATCH8	100	91.290	ENSPTIG00000020001	GPATCH8	100	91.090	Panthera_tigris_altaica
ENSCJAG00000009807	GPATCH8	100	97.004	ENSPTRG00000009278	GPATCH8	100	97.004	Pan_troglodytes
ENSCJAG00000009807	GPATCH8	100	97.202	ENSPANG00000021304	GPATCH8	100	97.202	Papio_anubis
ENSCJAG00000009807	GPATCH8	100	88.535	ENSPEMG00000008337	Gpatch8	100	88.138	Peromyscus_maniculatus_bairdii
ENSCJAG00000009807	GPATCH8	95	81.298	ENSPCIG00000019927	GPATCH8	100	80.600	Phascolarctos_cinereus
ENSCJAG00000009807	GPATCH8	100	96.469	ENSPPYG00000008329	GPATCH8	100	96.469	Pongo_abelii
ENSCJAG00000009807	GPATCH8	77	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
ENSCJAG00000009807	GPATCH8	100	90.746	ENSPCOG00000019209	GPATCH8	99	93.639	Propithecus_coquereli
ENSCJAG00000009807	GPATCH8	100	90.963	ENSPVAG00000003155	GPATCH8	100	90.897	Pteropus_vampyrus
ENSCJAG00000009807	GPATCH8	100	87.039	ENSRNOG00000021044	Gpatch8	55	84.255	Rattus_norvegicus
ENSCJAG00000009807	GPATCH8	100	96.804	ENSRBIG00000033713	GPATCH8	100	96.804	Rhinopithecus_bieti
ENSCJAG00000009807	GPATCH8	100	96.804	ENSRROG00000029623	GPATCH8	100	96.804	Rhinopithecus_roxellana
ENSCJAG00000009807	GPATCH8	100	97.870	ENSSBOG00000023544	GPATCH8	100	97.870	Saimiri_boliviensis_boliviensis
ENSCJAG00000009807	GPATCH8	100	81.932	ENSSHAG00000016140	GPATCH8	100	81.205	Sarcophilus_harrisii
ENSCJAG00000009807	GPATCH8	100	87.508	ENSSARG00000007516	GPATCH8	100	87.575	Sorex_araneus
ENSCJAG00000009807	GPATCH8	100	91.987	ENSSSCG00000017357	ITGA2B	100	90.712	Sus_scrofa
ENSCJAG00000009807	GPATCH8	91	95.963	ENSTBEG00000009486	GPATCH8	91	95.963	Tupaia_belangeri
ENSCJAG00000009807	GPATCH8	99	87.416	ENSTTRG00000010527	GPATCH8	100	86.747	Tursiops_truncatus
ENSCJAG00000009807	GPATCH8	95	89.832	ENSUMAG00000013891	GPATCH8	100	89.762	Ursus_maritimus
ENSCJAG00000009807	GPATCH8	90	90.613	ENSVPAG00000006937	GPATCH8	99	89.727	Vicugna_pacos
ENSCJAG00000009807	GPATCH8	100	93.019	ENSVVUG00000017996	GPATCH8	100	93.019	Vulpes_vulpes