EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000009933 (Gene tree)
Gene ID: 100401465
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 5260 bases
Position: chrNTIC01013335.1:38808276-38813535
Accession: 100401465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000018306	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000019340	-	612	-	ENSCJAP00000018306	203 (aa)	XP_003735179	F7F4K3

Gene Model

Click here to download ENSCJAG00000009933's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000009933	-	80	38.824	ENSCJAG00000003973	RAB9A	83	38.824
ENSCJAG00000009933	-	78	41.358	ENSCJAG00000009762	RAB36	61	41.358
ENSCJAG00000009933	-	80	40.476	ENSCJAG00000003347	RAB9B	83	40.476
ENSCJAG00000009933	-	80	38.323	ENSCJAG00000017521	RAB7A	83	38.037
ENSCJAG00000009933	-	91	36.757	ENSCJAG00000044757	KRAS	85	40.123
ENSCJAG00000009933	-	91	36.702	ENSCJAG00000044464	RAB22A	88	38.596
ENSCJAG00000009933	-	95	40.104	ENSCJAG00000048394	RAB5A	84	41.436
ENSCJAG00000009933	-	91	53.804	ENSCJAG00000047933	-	92	53.804
ENSCJAG00000009933	-	84	51.744	ENSCJAG00000015468	RAB12	51	51.744
ENSCJAG00000009933	-	87	36.517	ENSCJAG00000012199	HRAS	85	39.506
ENSCJAG00000009933	-	83	41.379	ENSCJAG00000040200	RAB33B	76	41.379
ENSCJAG00000009933	-	94	41.667	ENSCJAG00000010778	RAB11B	93	47.368
ENSCJAG00000009933	-	84	53.529	ENSCJAG00000019696	RAB15	94	57.143
ENSCJAG00000009933	-	83	30.114	ENSCJAG00000008094	DNAJC27	90	30.189
ENSCJAG00000009933	-	73	32.000	ENSCJAG00000039507	-	87	32.919
ENSCJAG00000009933	-	87	42.781	ENSCJAG00000002524	RAB33A	79	42.781
ENSCJAG00000009933	-	86	46.629	ENSCJAG00000047802	RAB39B	84	46.629
ENSCJAG00000009933	-	79	37.423	ENSCJAG00000044294	MRAS	78	37.423
ENSCJAG00000009933	-	90	55.435	ENSCJAG00000046275	RAB1A	90	55.866
ENSCJAG00000009933	-	84	55.294	ENSCJAG00000008955	RAB35	84	55.294
ENSCJAG00000009933	-	91	53.804	ENSCJAG00000001599	-	92	53.804
ENSCJAG00000009933	-	62	31.429	ENSCJAG00000010382	ARFRP1	68	31.206
ENSCJAG00000009933	-	81	32.121	ENSCJAG00000042669	RHEB	87	32.121
ENSCJAG00000009933	-	81	38.182	ENSCJAG00000010247	RAB23	69	38.182
ENSCJAG00000009933	-	67	30.147	ENSCJAG00000017604	ARF5	72	30.147
ENSCJAG00000009933	-	89	41.711	ENSCJAG00000042020	RAB14	87	41.711
ENSCJAG00000009933	-	95	38.350	ENSCJAG00000013101	RAB34	73	38.947
ENSCJAG00000009933	-	78	31.013	ENSCJAG00000018414	-	67	31.013
ENSCJAG00000009933	-	86	44.318	ENSCJAG00000045749	RAB18	85	44.318
ENSCJAG00000009933	-	95	36.458	ENSCJAG00000041780	RAB5B	71	40.994
ENSCJAG00000009933	-	80	49.383	ENSCJAG00000041773	RAB30	80	49.383
ENSCJAG00000009933	-	91	41.081	ENSCJAG00000007715	RAB25	90	41.081
ENSCJAG00000009933	-	73	32.000	ENSCJAG00000042173	-	87	32.919
ENSCJAG00000009933	-	81	47.273	ENSCJAG00000042037	RAB11A	76	47.273
ENSCJAG00000009933	-	78	43.671	ENSCJAG00000039039	RAB6A	76	43.671
ENSCJAG00000009933	-	79	38.272	ENSCJAG00000036517	NRAS	90	38.272
ENSCJAG00000009933	-	99	32.536	ENSCJAG00000021602	RERG	84	34.682
ENSCJAG00000009933	-	83	48.214	ENSCJAG00000008981	RAB2B	78	48.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009933	-	100	98.030	ENSG00000143545	RAB13	100	98.030	Homo_sapiens
ENSCJAG00000009933	-	99	75.622	ENSACIG00000008584	rab13	85	83.051	Amphilophus_citrinellus
ENSCJAG00000009933	-	100	97.044	ENSANAG00000030247	-	100	97.044	Aotus_nancymaae
ENSCJAG00000009933	-	99	78.713	ENSAMXG00000030712	rab13	90	84.153	Astyanax_mexicanus
ENSCJAG00000009933	-	100	96.552	ENSBTAG00000017604	RAB13	100	96.552	Bos_taurus
ENSCJAG00000009933	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSCJAG00000009933	-	100	96.059	ENSCHIG00000022271	-	93	97.354	Capra_hircus
ENSCJAG00000009933	-	99	90.594	ENSCPOG00000011491	-	93	93.122	Cavia_porcellus
ENSCJAG00000009933	-	100	98.522	ENSCCAG00000028502	-	100	98.522	Cebus_capucinus
ENSCJAG00000009933	-	100	98.030	ENSCATG00000041779	-	100	98.030	Cercocebus_atys
ENSCJAG00000009933	-	100	89.655	ENSCLAG00000006603	-	100	89.655	Chinchilla_lanigera
ENSCJAG00000009933	-	100	98.030	ENSCANG00000036573	-	100	98.030	Colobus_angolensis_palliatus
ENSCJAG00000009933	-	100	94.089	ENSCGRG00001021505	Rab13	100	94.089	Cricetulus_griseus_chok1gshd
ENSCJAG00000009933	-	100	94.089	ENSCGRG00000012126	Rab13	100	94.089	Cricetulus_griseus_crigri
ENSCJAG00000009933	-	99	75.980	ENSCSEG00000002358	rab13	89	83.240	Cynoglossus_semilaevis
ENSCJAG00000009933	-	99	78.713	ENSDARG00000034771	rab13	95	82.105	Danio_rerio
ENSCJAG00000009933	-	100	95.074	ENSDORG00000001591	Rab13	100	95.074	Dipodomys_ordii
ENSCJAG00000009933	-	100	97.537	ENSEASG00005000683	-	100	97.537	Equus_asinus_asinus
ENSCJAG00000009933	-	100	97.537	ENSECAG00000016551	RAB13	100	97.537	Equus_caballus
ENSCJAG00000009933	-	99	89.604	ENSEEUG00000001233	-	93	91.005	Erinaceus_europaeus
ENSCJAG00000009933	-	99	77.073	ENSELUG00000012801	rab13	90	81.283	Esox_lucius
ENSCJAG00000009933	-	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSCJAG00000009933	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSCJAG00000009933	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSCJAG00000009933	-	99	76.238	ENSGACG00000011925	rab13	94	78.836	Gasterosteus_aculeatus
ENSCJAG00000009933	-	85	90.751	ENSGAGG00000000742	-	86	90.751	Gopherus_agassizii
ENSCJAG00000009933	-	100	98.030	ENSGGOG00000023693	RAB13	100	98.030	Gorilla_gorilla
ENSCJAG00000009933	-	100	89.163	ENSHGLG00000008749	RAB13	94	91.534	Heterocephalus_glaber_female
ENSCJAG00000009933	-	100	89.163	ENSHGLG00100013608	RAB13	94	91.534	Heterocephalus_glaber_male
ENSCJAG00000009933	-	99	73.039	ENSHCOG00000007440	rab13	97	84.659	Hippocampus_comes
ENSCJAG00000009933	-	99	76.500	ENSIPUG00000003199	rab13	86	85.549	Ictalurus_punctatus
ENSCJAG00000009933	-	100	96.059	ENSSTOG00000011222	-	100	96.059	Ictidomys_tridecemlineatus
ENSCJAG00000009933	-	100	92.611	ENSJJAG00000010575	Rab13	100	92.611	Jaculus_jaculus
ENSCJAG00000009933	-	99	75.490	ENSKMAG00000001908	rab13	90	83.432	Kryptolebias_marmoratus
ENSCJAG00000009933	-	99	76.471	ENSLBEG00000026779	rab13	90	81.283	Labrus_bergylta
ENSCJAG00000009933	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSCJAG00000009933	-	100	98.030	ENSMFAG00000041018	RAB13	100	98.030	Macaca_fascicularis
ENSCJAG00000009933	-	100	98.030	ENSMNEG00000028951	-	100	98.030	Macaca_nemestrina
ENSCJAG00000009933	-	100	98.030	ENSMLEG00000042247	-	100	98.030	Mandrillus_leucophaeus
ENSCJAG00000009933	-	99	74.272	ENSMAMG00000014602	rab13	87	84.393	Mastacembelus_armatus
ENSCJAG00000009933	-	100	94.089	ENSMAUG00000015713	Rab13	100	94.089	Mesocricetus_auratus
ENSCJAG00000009933	-	100	95.567	ENSMICG00000010340	-	94	96.296	Microcebus_murinus
ENSCJAG00000009933	-	100	94.089	ENSMOCG00000021448	Rab13	100	94.089	Microtus_ochrogaster
ENSCJAG00000009933	-	99	93.069	ENSMODG00000017295	-	79	95.263	Monodelphis_domestica
ENSCJAG00000009933	-	100	91.626	MGP_CAROLIEiJ_G0025227	Rab13	93	93.651	Mus_caroli
ENSCJAG00000009933	-	100	91.133	ENSMUSG00000027935	Rab13	94	93.122	Mus_musculus
ENSCJAG00000009933	-	99	91.089	MGP_PahariEiJ_G0026671	Rab13	94	93.122	Mus_pahari
ENSCJAG00000009933	-	100	94.089	ENSNGAG00000010309	Rab13	94	96.296	Nannospalax_galili
ENSCJAG00000009933	-	99	75.122	ENSNBRG00000004124	rab13	87	83.815	Neolamprologus_brichardi
ENSCJAG00000009933	-	100	98.030	ENSNLEG00000028944	-	100	98.030	Nomascus_leucogenys
ENSCJAG00000009933	-	100	93.137	ENSMEUG00000009667	-	100	93.137	Notamacropus_eugenii
ENSCJAG00000009933	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSCJAG00000009933	-	100	88.177	ENSODEG00000010443	-	100	88.177	Octodon_degus
ENSCJAG00000009933	-	99	75.743	ENSONIG00000006340	rab13	89	81.183	Oreochromis_niloticus
ENSCJAG00000009933	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSCJAG00000009933	-	95	80.729	ENSOMEG00000008210	rab13	90	81.818	Oryzias_melastigma
ENSCJAG00000009933	-	99	93.069	ENSOGAG00000016969	-	94	94.709	Otolemur_garnettii
ENSCJAG00000009933	-	100	98.030	ENSPPAG00000028435	-	100	98.030	Pan_paniscus
ENSCJAG00000009933	-	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSCJAG00000009933	-	100	98.030	ENSPTRG00000001370	RAB13	100	98.030	Pan_troglodytes
ENSCJAG00000009933	-	100	98.030	ENSPANG00000004479	-	100	98.030	Papio_anubis
ENSCJAG00000009933	-	99	75.743	ENSPMGG00000007680	rab13	91	81.421	Periophthalmus_magnuspinnatus
ENSCJAG00000009933	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSCJAG00000009933	-	100	93.137	ENSPCIG00000029350	-	100	93.137	Phascolarctos_cinereus
ENSCJAG00000009933	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSCJAG00000009933	-	90	80.328	ENSPREG00000017567	rab13	91	80.328	Poecilia_reticulata
ENSCJAG00000009933	-	100	98.030	ENSPPYG00000000790	-	100	98.030	Pongo_abelii
ENSCJAG00000009933	-	100	96.552	ENSPCOG00000012189	-	100	96.552	Propithecus_coquereli
ENSCJAG00000009933	-	100	94.581	ENSPVAG00000011095	-	94	96.296	Pteropus_vampyrus
ENSCJAG00000009933	-	92	82.258	ENSPNAG00000004189	rab13	95	82.258	Pygocentrus_nattereri
ENSCJAG00000009933	-	100	92.118	ENSRNOG00000016733	Rab13	100	92.118	Rattus_norvegicus
ENSCJAG00000009933	-	100	98.522	ENSRBIG00000008552	-	100	98.522	Rhinopithecus_bieti
ENSCJAG00000009933	-	100	98.522	ENSRROG00000036885	-	100	98.522	Rhinopithecus_roxellana
ENSCJAG00000009933	-	100	98.522	ENSSBOG00000020342	-	100	98.522	Saimiri_boliviensis_boliviensis
ENSCJAG00000009933	-	100	92.647	ENSSHAG00000011866	-	100	92.647	Sarcophilus_harrisii
ENSCJAG00000009933	-	100	97.537	ENSSSCG00000006564	-	100	97.537	Sus_scrofa
ENSCJAG00000009933	-	99	75.980	ENSTRUG00000024177	rab13	89	84.181	Takifugu_rubripes
ENSCJAG00000009933	-	100	95.567	ENSTBEG00000012734	-	100	95.567	Tupaia_belangeri
ENSCJAG00000009933	-	100	98.522	ENSTTRG00000011183	-	100	98.522	Tursiops_truncatus
ENSCJAG00000009933	-	70	80.420	ENSXETG00000020729	rab13	89	80.420	Xenopus_tropicalis
ENSCJAG00000009933	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus