EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000009934 (Gene tree)
Gene ID: 100387580
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 39559 bases
Position: chrNTIC01033278.1:98795664-98835222
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000018296	YTH	PF04146.15	1.1e-39	1	1
ENSCJAP00000064411	YTH	PF04146.15	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000019329	YTHDC1-202	2133	-	ENSCJAP00000018296	710 (aa)	-	F7FII3
ENSCJAT00000072464	YTHDC1-201	6699	-	ENSCJAP00000064411	728 (aa)	-	A0A2R8PI86

Gene Model

Click here to download ENSCJAG00000009934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009934's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009934	YTHDC1	100	99.451	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSCJAG00000009934	YTHDC1	57	59.759	ENSAPOG00000013997	ythdc1	57	62.768	Acanthochromis_polyacanthus
ENSCJAG00000009934	YTHDC1	100	97.811	ENSAMEG00000005688	YTHDC1	100	97.811	Ailuropoda_melanoleuca
ENSCJAG00000009934	YTHDC1	71	58.513	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSCJAG00000009934	YTHDC1	57	61.468	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSCJAG00000009934	YTHDC1	91	85.113	ENSAPLG00000009921	YTHDC1	60	96.659	Anas_platyrhynchos
ENSCJAG00000009934	YTHDC1	93	83.556	ENSACAG00000009697	YTHDC1	93	83.407	Anolis_carolinensis
ENSCJAG00000009934	YTHDC1	100	99.588	ENSANAG00000001522	YTHDC1	100	99.588	Aotus_nancymaae
ENSCJAG00000009934	YTHDC1	57	59.633	ENSACLG00000019371	ythdc1	59	66.362	Astatotilapia_calliptera
ENSCJAG00000009934	YTHDC1	93	64.409	ENSAMXG00000006978	ythdc1	92	65.896	Astyanax_mexicanus
ENSCJAG00000009934	YTHDC1	100	97.805	ENSBTAG00000015572	YTHDC1	100	97.805	Bos_taurus
ENSCJAG00000009934	YTHDC1	100	97.811	ENSCAFG00000002821	YTHDC1	100	97.811	Canis_familiaris
ENSCJAG00000009934	YTHDC1	100	97.811	ENSCAFG00020027112	YTHDC1	100	97.811	Canis_lupus_dingo
ENSCJAG00000009934	YTHDC1	91	89.466	ENSCHIG00000004810	YTHDC1	95	93.916	Capra_hircus
ENSCJAG00000009934	YTHDC1	100	99.313	ENSTSYG00000011668	YTHDC1	100	99.313	Carlito_syrichta
ENSCJAG00000009934	YTHDC1	90	71.094	ENSCAPG00000008722	YTHDC1	90	69.397	Cavia_aperea
ENSCJAG00000009934	YTHDC1	100	91.209	ENSCPOG00000010929	YTHDC1	100	91.209	Cavia_porcellus
ENSCJAG00000009934	YTHDC1	100	99.725	ENSCCAG00000035754	YTHDC1	100	99.725	Cebus_capucinus
ENSCJAG00000009934	YTHDC1	100	99.577	ENSCATG00000036320	YTHDC1	100	99.577	Cercocebus_atys
ENSCJAG00000009934	YTHDC1	99	97.714	ENSCLAG00000005482	YTHDC1	99	97.714	Chinchilla_lanigera
ENSCJAG00000009934	YTHDC1	100	99.588	ENSCSAG00000005252	YTHDC1	100	99.588	Chlorocebus_sabaeus
ENSCJAG00000009934	YTHDC1	92	86.607	ENSCPBG00000021965	YTHDC1	94	87.211	Chrysemys_picta_bellii
ENSCJAG00000009934	YTHDC1	100	99.725	ENSCANG00000004769	YTHDC1	100	99.725	Colobus_angolensis_palliatus
ENSCJAG00000009934	YTHDC1	100	97.324	ENSCGRG00001000816	Ythdc1	100	97.324	Cricetulus_griseus_chok1gshd
ENSCJAG00000009934	YTHDC1	99	97.357	ENSCGRG00000009807	Ythdc1	99	97.357	Cricetulus_griseus_crigri
ENSCJAG00000009934	YTHDC1	57	60.352	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSCJAG00000009934	YTHDC1	57	59.424	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSCJAG00000009934	YTHDC1	93	63.557	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSCJAG00000009934	YTHDC1	100	97.119	ENSDNOG00000004949	YTHDC1	100	97.119	Dasypus_novemcinctus
ENSCJAG00000009934	YTHDC1	99	98.609	ENSDORG00000013045	Ythdc1	100	98.609	Dipodomys_ordii
ENSCJAG00000009934	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSCJAG00000009934	YTHDC1	100	98.358	ENSEASG00005018383	YTHDC1	100	98.358	Equus_asinus_asinus
ENSCJAG00000009934	YTHDC1	100	97.948	ENSECAG00000018303	YTHDC1	100	97.948	Equus_caballus
ENSCJAG00000009934	YTHDC1	100	96.571	ENSEEUG00000015466	YTHDC1	100	96.571	Erinaceus_europaeus
ENSCJAG00000009934	YTHDC1	93	61.615	ENSELUG00000014029	ythdc1	57	77.179	Esox_lucius
ENSCJAG00000009934	YTHDC1	100	97.671	ENSFCAG00000026791	YTHDC1	100	97.671	Felis_catus
ENSCJAG00000009934	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	93.917	Ficedula_albicollis
ENSCJAG00000009934	YTHDC1	99	97.772	ENSFDAG00000018560	YTHDC1	100	97.772	Fukomys_damarensis
ENSCJAG00000009934	YTHDC1	65	58.730	ENSFHEG00000001286	ythdc1	60	56.325	Fundulus_heteroclitus
ENSCJAG00000009934	YTHDC1	63	64.184	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSCJAG00000009934	YTHDC1	92	85.991	ENSGALG00000035906	YTHDC1	85	83.459	Gallus_gallus
ENSCJAG00000009934	YTHDC1	51	65.233	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSCJAG00000009934	YTHDC1	57	62.383	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSCJAG00000009934	YTHDC1	93	85.505	ENSGAGG00000007108	YTHDC1	93	85.505	Gopherus_agassizii
ENSCJAG00000009934	YTHDC1	100	99.577	ENSGGOG00000021958	YTHDC1	100	99.577	Gorilla_gorilla
ENSCJAG00000009934	YTHDC1	57	59.633	ENSHBUG00000019288	ythdc1	59	66.362	Haplochromis_burtoni
ENSCJAG00000009934	YTHDC1	100	97.465	ENSHGLG00000006319	-	100	97.465	Heterocephalus_glaber_female
ENSCJAG00000009934	YTHDC1	94	71.429	ENSHGLG00000003239	-	57	78.708	Heterocephalus_glaber_female
ENSCJAG00000009934	YTHDC1	94	69.956	ENSHGLG00100008060	-	57	76.247	Heterocephalus_glaber_male
ENSCJAG00000009934	YTHDC1	100	96.585	ENSHGLG00100001556	-	100	96.585	Heterocephalus_glaber_male
ENSCJAG00000009934	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSCJAG00000009934	YTHDC1	93	67.442	ENSIPUG00000018136	ythdc1	61	83.759	Ictalurus_punctatus
ENSCJAG00000009934	YTHDC1	100	98.098	ENSSTOG00000013652	YTHDC1	100	98.098	Ictidomys_tridecemlineatus
ENSCJAG00000009934	YTHDC1	91	92.260	ENSJJAG00000010268	Ythdc1	93	92.125	Jaculus_jaculus
ENSCJAG00000009934	YTHDC1	57	60.502	ENSKMAG00000006483	ythdc1	85	65.533	Kryptolebias_marmoratus
ENSCJAG00000009934	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSCJAG00000009934	YTHDC1	87	73.981	ENSLACG00000004893	YTHDC1	92	73.906	Latimeria_chalumnae
ENSCJAG00000009934	YTHDC1	93	73.560	ENSLOCG00000003045	ythdc1	92	88.702	Lepisosteus_oculatus
ENSCJAG00000009934	YTHDC1	100	96.060	ENSLAFG00000021592	YTHDC1	100	96.060	Loxodonta_africana
ENSCJAG00000009934	YTHDC1	100	99.718	ENSMFAG00000031927	YTHDC1	100	99.718	Macaca_fascicularis
ENSCJAG00000009934	YTHDC1	100	99.725	ENSMMUG00000002265	YTHDC1	100	99.725	Macaca_mulatta
ENSCJAG00000009934	YTHDC1	100	99.725	ENSMNEG00000033751	YTHDC1	100	99.725	Macaca_nemestrina
ENSCJAG00000009934	YTHDC1	100	99.588	ENSMLEG00000042147	YTHDC1	100	99.588	Mandrillus_leucophaeus
ENSCJAG00000009934	YTHDC1	55	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSCJAG00000009934	YTHDC1	57	59.633	ENSMZEG00005023173	ythdc1	59	66.362	Maylandia_zebra
ENSCJAG00000009934	YTHDC1	93	84.593	ENSMGAG00000010391	YTHDC1	59	96.420	Meleagris_gallopavo
ENSCJAG00000009934	YTHDC1	100	97.042	ENSMAUG00000001286	Ythdc1	100	97.042	Mesocricetus_auratus
ENSCJAG00000009934	YTHDC1	100	97.422	ENSMICG00000034640	YTHDC1	100	97.422	Microcebus_murinus
ENSCJAG00000009934	YTHDC1	100	97.324	ENSMOCG00000020201	Ythdc1	100	97.324	Microtus_ochrogaster
ENSCJAG00000009934	YTHDC1	93	89.614	ENSMODG00000020754	-	92	88.576	Monodelphis_domestica
ENSCJAG00000009934	YTHDC1	96	51.641	ENSMODG00000010076	-	60	61.538	Monodelphis_domestica
ENSCJAG00000009934	YTHDC1	64	57.872	ENSMODG00000009173	-	88	61.594	Monodelphis_domestica
ENSCJAG00000009934	YTHDC1	87	69.476	ENSMODG00000014337	-	95	69.830	Monodelphis_domestica
ENSCJAG00000009934	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	69.054	Monopterus_albus
ENSCJAG00000009934	YTHDC1	93	95.846	MGP_CAROLIEiJ_G0027347	Ythdc1	97	92.870	Mus_caroli
ENSCJAG00000009934	YTHDC1	100	97.119	ENSMUSG00000035851	Ythdc1	100	97.119	Mus_musculus
ENSCJAG00000009934	YTHDC1	100	97.394	MGP_PahariEiJ_G0017126	Ythdc1	100	97.394	Mus_pahari
ENSCJAG00000009934	YTHDC1	100	97.394	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.394	Mus_spretus
ENSCJAG00000009934	YTHDC1	93	73.314	ENSMPUG00000001743	YTHDC1	53	98.695	Mustela_putorius_furo
ENSCJAG00000009934	YTHDC1	99	97.493	ENSMLUG00000016300	YTHDC1	100	97.493	Myotis_lucifugus
ENSCJAG00000009934	YTHDC1	59	96.445	ENSNGAG00000024000	Ythdc1	93	96.445	Nannospalax_galili
ENSCJAG00000009934	YTHDC1	57	60.422	ENSNBRG00000007663	ythdc1	70	66.589	Neolamprologus_brichardi
ENSCJAG00000009934	YTHDC1	99	97.662	ENSNLEG00000009202	YTHDC1	99	97.662	Nomascus_leucogenys
ENSCJAG00000009934	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSCJAG00000009934	YTHDC1	75	99.150	ENSOPRG00000008986	YTHDC1	74	99.150	Ochotona_princeps
ENSCJAG00000009934	YTHDC1	100	97.253	ENSODEG00000001715	YTHDC1	100	97.253	Octodon_degus
ENSCJAG00000009934	YTHDC1	57	60.092	ENSONIG00000012651	ythdc1	59	66.819	Oreochromis_niloticus
ENSCJAG00000009934	YTHDC1	88	75.994	ENSOANG00000014398	YTHDC1	55	95.443	Ornithorhynchus_anatinus
ENSCJAG00000009934	YTHDC1	93	82.127	ENSOCUG00000015886	YTHDC1	57	95.729	Oryctolagus_cuniculus
ENSCJAG00000009934	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSCJAG00000009934	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSCJAG00000009934	YTHDC1	56	61.520	ENSOMEG00000000551	ythdc1	60	65.526	Oryzias_melastigma
ENSCJAG00000009934	YTHDC1	100	97.940	ENSOGAG00000003362	YTHDC1	100	97.940	Otolemur_garnettii
ENSCJAG00000009934	YTHDC1	100	97.805	ENSOARG00000008633	YTHDC1	100	97.805	Ovis_aries
ENSCJAG00000009934	YTHDC1	100	99.437	ENSPPAG00000041315	YTHDC1	100	99.437	Pan_paniscus
ENSCJAG00000009934	YTHDC1	100	97.753	ENSPPRG00000011979	YTHDC1	100	97.753	Panthera_pardus
ENSCJAG00000009934	YTHDC1	99	97.436	ENSPTIG00000015527	YTHDC1	100	97.436	Panthera_tigris_altaica
ENSCJAG00000009934	YTHDC1	100	99.437	ENSPTRG00000016105	YTHDC1	100	99.437	Pan_troglodytes
ENSCJAG00000009934	YTHDC1	100	99.577	ENSPANG00000021590	YTHDC1	100	99.577	Papio_anubis
ENSCJAG00000009934	YTHDC1	93	69.432	ENSPKIG00000018497	ythdc1	93	68.940	Paramormyrops_kingsleyae
ENSCJAG00000009934	YTHDC1	91	86.937	ENSPSIG00000002782	YTHDC1	92	86.937	Pelodiscus_sinensis
ENSCJAG00000009934	YTHDC1	55	56.667	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSCJAG00000009934	YTHDC1	99	97.632	ENSPEMG00000013850	Ythdc1	100	97.632	Peromyscus_maniculatus_bairdii
ENSCJAG00000009934	YTHDC1	93	89.466	ENSPCIG00000006870	YTHDC1	92	88.427	Phascolarctos_cinereus
ENSCJAG00000009934	YTHDC1	57	59.545	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSCJAG00000009934	YTHDC1	70	59.135	ENSPREG00000016973	ythdc1	59	60.050	Poecilia_reticulata
ENSCJAG00000009934	YTHDC1	87	99.367	ENSPPYG00000014726	YTHDC1	100	99.367	Pongo_abelii
ENSCJAG00000009934	YTHDC1	77	93.878	ENSPCAG00000009607	YTHDC1	77	93.878	Procavia_capensis
ENSCJAG00000009934	YTHDC1	100	93.812	ENSPCOG00000019105	YTHDC1	100	93.812	Propithecus_coquereli
ENSCJAG00000009934	YTHDC1	93	92.467	ENSPVAG00000015551	YTHDC1	93	93.058	Pteropus_vampyrus
ENSCJAG00000009934	YTHDC1	57	59.633	ENSPNYG00000011687	ythdc1	59	66.362	Pundamilia_nyererei
ENSCJAG00000009934	YTHDC1	93	69.420	ENSPNAG00000028365	ythdc1	93	69.509	Pygocentrus_nattereri
ENSCJAG00000009934	YTHDC1	100	95.399	ENSRNOG00000001996	Ythdc1	100	95.399	Rattus_norvegicus
ENSCJAG00000009934	YTHDC1	99	97.387	ENSRBIG00000028279	YTHDC1	99	97.387	Rhinopithecus_bieti
ENSCJAG00000009934	YTHDC1	100	99.725	ENSRROG00000035028	YTHDC1	100	99.725	Rhinopithecus_roxellana
ENSCJAG00000009934	YTHDC1	100	100.000	ENSSBOG00000022353	YTHDC1	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000009934	YTHDC1	93	88.427	ENSSHAG00000002538	YTHDC1	91	88.421	Sarcophilus_harrisii
ENSCJAG00000009934	YTHDC1	93	68.169	ENSSFOG00015003298	ythdc1	60	86.019	Scleropages_formosus
ENSCJAG00000009934	YTHDC1	56	60.314	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSCJAG00000009934	YTHDC1	55	61.017	ENSSDUG00000022008	ythdc1	59	67.277	Seriola_dumerili
ENSCJAG00000009934	YTHDC1	55	61.017	ENSSLDG00000007926	ythdc1	59	67.277	Seriola_lalandi_dorsalis
ENSCJAG00000009934	YTHDC1	79	98.443	ENSSARG00000010960	YTHDC1	100	98.443	Sorex_araneus
ENSCJAG00000009934	YTHDC1	93	82.891	ENSSPUG00000009357	YTHDC1	92	79.545	Sphenodon_punctatus
ENSCJAG00000009934	YTHDC1	57	62.156	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSCJAG00000009934	YTHDC1	99	97.095	ENSSSCG00000035505	YTHDC1	100	96.086	Sus_scrofa
ENSCJAG00000009934	YTHDC1	93	86.370	ENSTGUG00000004452	-	92	85.926	Taeniopygia_guttata
ENSCJAG00000009934	YTHDC1	63	61.224	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSCJAG00000009934	YTHDC1	86	60.304	ENSTNIG00000013243	ythdc1	89	66.279	Tetraodon_nigroviridis
ENSCJAG00000009934	YTHDC1	93	87.240	ENSTBEG00000011546	YTHDC1	92	87.834	Tupaia_belangeri
ENSCJAG00000009934	YTHDC1	100	96.854	ENSTTRG00000005083	YTHDC1	100	96.854	Tursiops_truncatus
ENSCJAG00000009934	YTHDC1	93	97.791	ENSUAMG00000010388	YTHDC1	100	97.791	Ursus_americanus
ENSCJAG00000009934	YTHDC1	99	84.006	ENSUMAG00000013668	YTHDC1	98	84.006	Ursus_maritimus
ENSCJAG00000009934	YTHDC1	100	97.887	ENSVPAG00000009040	YTHDC1	100	97.887	Vicugna_pacos
ENSCJAG00000009934	YTHDC1	99	96.712	ENSVVUG00000005387	YTHDC1	100	97.647	Vulpes_vulpes
ENSCJAG00000009934	YTHDC1	92	74.184	ENSXETG00000017960	ythdc1	91	72.546	Xenopus_tropicalis
ENSCJAG00000009934	YTHDC1	50	52.574	ENSXCOG00000000530	ythdc1	79	56.198	Xiphophorus_couchianus
ENSCJAG00000009934	YTHDC1	56	60.000	ENSXMAG00000005196	ythdc1	61	65.138	Xiphophorus_maculatus