EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000009960 (Gene tree)
Gene ID: 100404217
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 80495 bases
Position: chrNTIC01005557.1:4179524-4260018
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000018442	IF-2	PF11987.8	3.2e-17	1	1
ENSCJAP00000018442	GTP_EFTU	PF00009.27	1.1e-34	1	1
ENSCJAP00000018442	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000019486	-	3513	-	ENSCJAP00000018442	1170 (aa)	-	F7GVT0

Gene Model

Click here to download ENSCJAG00000009960's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000009960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000009960	-	71	72.203	ENSAPOG00000004375	eif5b	97	65.075	Acanthochromis_polyacanthus
ENSCJAG00000009960	-	67	71.376	ENSACIG00000024324	eif5b	58	79.633	Amphilophus_citrinellus
ENSCJAG00000009960	-	71	73.264	ENSAOCG00000018386	eif5b	97	65.407	Amphiprion_ocellaris
ENSCJAG00000009960	-	98	75.900	ENSACAG00000008305	-	97	75.923	Anolis_carolinensis
ENSCJAG00000009960	-	71	70.103	ENSACLG00000005530	eif5b	68	80.134	Astatotilapia_calliptera
ENSCJAG00000009960	-	97	82.419	ENSCAPG00000014619	-	97	81.834	Cavia_aperea
ENSCJAG00000009960	-	98	86.807	ENSCPOG00000011967	-	97	86.050	Cavia_porcellus
ENSCJAG00000009960	-	56	75.628	ENSCHOG00000002137	-	67	75.806	Choloepus_hoffmanni
ENSCJAG00000009960	-	71	72.675	ENSCVAG00000019619	eif5b	97	63.303	Cyprinodon_variegatus
ENSCJAG00000009960	-	51	100.000	ENSEEUG00000001093	-	50	100.000	Erinaceus_europaeus
ENSCJAG00000009960	-	68	82.203	ENSELUG00000001132	eif5b	57	80.528	Esox_lucius
ENSCJAG00000009960	-	65	76.461	ENSGMOG00000002031	eif5b	70	65.389	Gadus_morhua
ENSCJAG00000009960	-	71	69.805	ENSGACG00000010536	eif5b	82	78.261	Gasterosteus_aculeatus
ENSCJAG00000009960	-	51	87.480	ENSGAGG00000022242	-	94	86.321	Gopherus_agassizii
ENSCJAG00000009960	-	71	71.461	ENSHBUG00000023319	eif5b	97	63.043	Haplochromis_burtoni
ENSCJAG00000009960	-	70	73.666	ENSIPUG00000020910	eif5b	97	65.217	Ictalurus_punctatus
ENSCJAG00000009960	-	71	72.686	ENSKMAG00000004325	eif5b	97	63.000	Kryptolebias_marmoratus
ENSCJAG00000009960	-	71	69.178	ENSLBEG00000027090	eif5b	97	62.384	Labrus_bergylta
ENSCJAG00000009960	-	71	71.461	ENSMZEG00005012696	eif5b	97	62.991	Maylandia_zebra
ENSCJAG00000009960	-	98	76.703	ENSMODG00000001387	-	98	76.703	Monodelphis_domestica
ENSCJAG00000009960	-	71	69.319	ENSNBRG00000021912	eif5b	94	60.309	Neolamprologus_brichardi
ENSCJAG00000009960	-	79	88.889	ENSMEUG00000007080	-	78	89.916	Notamacropus_eugenii
ENSCJAG00000009960	-	71	71.560	ENSONIG00000018749	eif5b	97	62.510	Oreochromis_niloticus
ENSCJAG00000009960	-	99	75.168	ENSOANG00000004621	-	98	72.742	Ornithorhynchus_anatinus
ENSCJAG00000009960	-	98	89.532	ENSOCUG00000021154	-	98	88.543	Oryctolagus_cuniculus
ENSCJAG00000009960	-	71	70.690	ENSORLG00000001525	eif5b	51	79.466	Oryzias_latipes
ENSCJAG00000009960	-	71	70.757	ENSORLG00020005327	eif5b	51	79.633	Oryzias_latipes_hni
ENSCJAG00000009960	-	71	70.805	ENSORLG00015008949	eif5b	51	79.466	Oryzias_latipes_hsok
ENSCJAG00000009960	-	64	70.166	ENSOMEG00000016539	eif5b	97	70.763	Oryzias_melastigma
ENSCJAG00000009960	-	98	63.336	ENSPKIG00000011133	eif5b	97	62.726	Paramormyrops_kingsleyae
ENSCJAG00000009960	-	57	81.960	ENSPSIG00000014914	-	99	80.914	Pelodiscus_sinensis
ENSCJAG00000009960	-	72	62.357	ENSPMAG00000004508	eif5b	71	61.387	Petromyzon_marinus
ENSCJAG00000009960	-	59	73.566	ENSPFOG00000007543	eif5b	90	81.305	Poecilia_formosa
ENSCJAG00000009960	-	71	73.519	ENSPLAG00000015913	eif5b	97	64.883	Poecilia_latipinna
ENSCJAG00000009960	-	71	73.434	ENSPMEG00000006712	eif5b	97	65.298	Poecilia_mexicana
ENSCJAG00000009960	-	68	95.714	ENSPCAG00000007829	-	69	95.714	Procavia_capensis
ENSCJAG00000009960	-	98	87.119	ENSPCOG00000019508	-	97	86.949	Propithecus_coquereli
ENSCJAG00000009960	-	88	97.143	ENSPVAG00000006592	-	84	97.143	Pteropus_vampyrus
ENSCJAG00000009960	-	76	69.240	ENSPNYG00000021051	eif5b	94	60.400	Pundamilia_nyererei
ENSCJAG00000009960	-	70	74.009	ENSPNAG00000023852	eif5b	97	64.983	Pygocentrus_nattereri
ENSCJAG00000009960	-	67	71.845	ENSSDUG00000005847	eif5b	78	71.824	Seriola_dumerili
ENSCJAG00000009960	-	67	71.845	ENSSLDG00000013738	eif5b	79	71.824	Seriola_lalandi_dorsalis
ENSCJAG00000009960	-	66	67.246	ENSSPAG00000005335	eif5b	59	75.292	Stegastes_partitus
ENSCJAG00000009960	-	66	65.217	ENSTRUG00000007772	eif5b	97	66.746	Takifugu_rubripes
ENSCJAG00000009960	-	73	67.079	ENSTNIG00000006580	eif5b	66	78.798	Tetraodon_nigroviridis
ENSCJAG00000009960	-	69	100.000	ENSTBEG00000009133	-	71	100.000	Tupaia_belangeri
ENSCJAG00000009960	-	98	66.751	ENSXETG00000019377	eif5b	97	66.223	Xenopus_tropicalis
ENSCJAG00000009960	-	70	70.471	ENSXCOG00000016681	eif5b	90	69.789	Xiphophorus_couchianus
ENSCJAG00000009960	-	70	70.519	ENSXMAG00000001002	eif5b	90	69.836	Xiphophorus_maculatus