EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000010220 (Gene tree)
Gene ID: 100389768
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 10713 bases
Position: chrNTIC01011113.1:35513447-35524159
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000018843	RRM_1	PF00076.22	7.8e-18	1	1
ENSCJAP00000059827	RRM_1	PF00076.22	8.5e-18	1	1
ENSCJAP00000064686	RRM_1	PF00076.22	9.2e-18	1	1
ENSCJAP00000018819	RRM_1	PF00076.22	7.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000019902	RBM42-203	1272	-	ENSCJAP00000018843	423 (aa)	-	F7CXC5
ENSCJAT00000075979	RBM42-202	2431	-	ENSCJAP00000059827	448 (aa)	-	A0A2R8MHT2
ENSCJAT00000070778	RBM42-201	2497	-	ENSCJAP00000064686	470 (aa)	-	A0A2R8PIQ1
ENSCJAT00000019877	RBM42-205	546	-	ENSCJAP00000018819	181 (aa)	-	F7DG17
ENSCJAT00000019898	RBM42-204	1152	-	ENSCJAP00000018839	383 (aa)	-	F7CXM7

Gene Model

Click here to download ENSCJAG00000010220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000010220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000010220	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSCJAG00000010220	RBM42	100	96.451	ENSAMEG00000000524	RBM42	100	96.451	Ailuropoda_melanoleuca
ENSCJAG00000010220	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSCJAG00000010220	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	97.582	Bos_taurus
ENSCJAG00000010220	RBM42	100	100.000	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSCJAG00000010220	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	98.661	Capra_hircus
ENSCJAG00000010220	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSCJAG00000010220	RBM42	81	96.632	ENSCAPG00000009566	RBM42	99	96.632	Cavia_aperea
ENSCJAG00000010220	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	98.438	Cavia_porcellus
ENSCJAG00000010220	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSCJAG00000010220	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSCJAG00000010220	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.768	Chinchilla_lanigera
ENSCJAG00000010220	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	98.891	Chlorocebus_sabaeus
ENSCJAG00000010220	RBM42	100	87.470	ENSCANG00000030272	RBM42	100	87.470	Colobus_angolensis_palliatus
ENSCJAG00000010220	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.098	Cricetulus_griseus_chok1gshd
ENSCJAG00000010220	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	97.118	Dasypus_novemcinctus
ENSCJAG00000010220	RBM42	100	97.321	ENSDORG00000013001	Rbm42	99	97.321	Dipodomys_ordii
ENSCJAG00000010220	RBM42	93	91.304	ENSETEG00000007878	RBM42	74	91.304	Echinops_telfairi
ENSCJAG00000010220	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	98.438	Equus_asinus_asinus
ENSCJAG00000010220	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	98.438	Equus_caballus
ENSCJAG00000010220	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSCJAG00000010220	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.889	Fukomys_damarensis
ENSCJAG00000010220	RBM42	73	97.183	ENSGAGG00000014805	RBM42	50	92.086	Gopherus_agassizii
ENSCJAG00000010220	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSCJAG00000010220	RBM42	96	100.000	ENSHGLG00000008418	RBM42	99	95.982	Heterocephalus_glaber_female
ENSCJAG00000010220	RBM42	96	100.000	ENSHGLG00100018667	RBM42	99	95.982	Heterocephalus_glaber_male
ENSCJAG00000010220	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	98.511	Ictidomys_tridecemlineatus
ENSCJAG00000010220	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	97.098	Jaculus_jaculus
ENSCJAG00000010220	RBM42	92	98.485	ENSLAFG00000014993	RBM42	99	93.920	Loxodonta_africana
ENSCJAG00000010220	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSCJAG00000010220	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSCJAG00000010220	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSCJAG00000010220	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSCJAG00000010220	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSCJAG00000010220	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	96.875	Microtus_ochrogaster
ENSCJAG00000010220	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	82.845	Monodelphis_domestica
ENSCJAG00000010220	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.545	Mus_caroli
ENSCJAG00000010220	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.545	Mus_musculus
ENSCJAG00000010220	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.545	Mus_pahari
ENSCJAG00000010220	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.545	Mus_spretus
ENSCJAG00000010220	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	98.661	Mustela_putorius_furo
ENSCJAG00000010220	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	95.388	Myotis_lucifugus
ENSCJAG00000010220	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.875	Nannospalax_galili
ENSCJAG00000010220	RBM42	85	86.066	ENSNLEG00000011272	-	99	85.979	Nomascus_leucogenys
ENSCJAG00000010220	RBM42	90	100.000	ENSMEUG00000016300	RBM42	100	81.070	Notamacropus_eugenii
ENSCJAG00000010220	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	92.437	Ochotona_princeps
ENSCJAG00000010220	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.991	Octodon_degus
ENSCJAG00000010220	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	97.561	Oryctolagus_cuniculus
ENSCJAG00000010220	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	96.226	Otolemur_garnettii
ENSCJAG00000010220	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	91.807	Ovis_aries
ENSCJAG00000010220	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSCJAG00000010220	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSCJAG00000010220	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSCJAG00000010220	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSCJAG00000010220	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSCJAG00000010220	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.991	Peromyscus_maniculatus_bairdii
ENSCJAG00000010220	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	82.895	Phascolarctos_cinereus
ENSCJAG00000010220	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	96.495	Pongo_abelii
ENSCJAG00000010220	RBM42	90	100.000	ENSPCAG00000013053	RBM42	88	93.407	Procavia_capensis
ENSCJAG00000010220	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSCJAG00000010220	RBM42	97	76.279	ENSPCOG00000020672	RBM42	81	96.697	Propithecus_coquereli
ENSCJAG00000010220	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	96.436	Pteropus_vampyrus
ENSCJAG00000010220	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.768	Rattus_norvegicus
ENSCJAG00000010220	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSCJAG00000010220	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000010220	RBM42	90	99.737	ENSSBOG00000030666	RBM42	100	99.737	Saimiri_boliviensis_boliviensis
ENSCJAG00000010220	RBM42	100	85.833	ENSSARG00000010724	RBM42	100	85.833	Sorex_araneus
ENSCJAG00000010220	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	98.438	Sus_scrofa
ENSCJAG00000010220	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	98.214	Ursus_americanus
ENSCJAG00000010220	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	96.703	Ursus_maritimus
ENSCJAG00000010220	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	98.438	Vulpes_vulpes