EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000010370 (Gene tree)
Gene ID: 100389232
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 22875 bases
Position: chrNTIC01000001.1:16885855-16908729
Accession: 100389232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000019170	PRP21_like_P	PF12230.8	1.4e-51	1	1
ENSCJAP00000019170	Surp	PF01805.20	9.2e-46	1	2
ENSCJAP00000019170	Surp	PF01805.20	9.2e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000020251	SF3A1-201	2382	-	ENSCJAP00000019170	793 (aa)	XP_002743717	F6QQU4

Gene Model

Click here to download ENSCJAG00000010370's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000010370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000010370	SF3A1	100	99.243	ENSG00000099995	SF3A1	100	99.243	Homo_sapiens
ENSCJAG00000010370	SF3A1	100	83.396	ENSAPOG00000020465	sf3a1	99	84.783	Acanthochromis_polyacanthus
ENSCJAG00000010370	SF3A1	100	98.365	ENSAMEG00000007737	SF3A1	100	98.365	Ailuropoda_melanoleuca
ENSCJAG00000010370	SF3A1	100	84.403	ENSACIG00000020672	sf3a1	98	85.807	Amphilophus_citrinellus
ENSCJAG00000010370	SF3A1	100	83.125	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSCJAG00000010370	SF3A1	100	83.250	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSCJAG00000010370	SF3A1	97	85.956	ENSATEG00000021201	sf3a1	97	85.142	Anabas_testudineus
ENSCJAG00000010370	SF3A1	95	94.452	ENSAPLG00000009057	SF3A1	99	93.532	Anas_platyrhynchos
ENSCJAG00000010370	SF3A1	100	85.714	ENSACAG00000009415	SF3A1	100	87.069	Anolis_carolinensis
ENSCJAG00000010370	SF3A1	100	99.748	ENSANAG00000032045	SF3A1	100	99.748	Aotus_nancymaae
ENSCJAG00000010370	SF3A1	100	84.383	ENSACLG00000012622	sf3a1	99	85.275	Astatotilapia_calliptera
ENSCJAG00000010370	SF3A1	99	83.312	ENSAMXG00000005382	sf3a1	99	84.170	Astyanax_mexicanus
ENSCJAG00000010370	SF3A1	100	99.117	ENSBTAG00000003390	SF3A1	100	99.117	Bos_taurus
ENSCJAG00000010370	SF3A1	84	43.268	WBGene00004188	prp-21	94	43.321	Caenorhabditis_elegans
ENSCJAG00000010370	SF3A1	100	98.865	ENSCAFG00000012559	SF3A1	100	98.865	Canis_familiaris
ENSCJAG00000010370	SF3A1	100	98.865	ENSCAFG00020000838	SF3A1	100	98.865	Canis_lupus_dingo
ENSCJAG00000010370	SF3A1	100	98.991	ENSCHIG00000018642	SF3A1	100	98.991	Capra_hircus
ENSCJAG00000010370	SF3A1	100	98.991	ENSTSYG00000004739	SF3A1	100	98.991	Carlito_syrichta
ENSCJAG00000010370	SF3A1	94	81.175	ENSCAPG00000015414	SF3A1	98	81.175	Cavia_aperea
ENSCJAG00000010370	SF3A1	100	98.865	ENSCPOG00000014589	SF3A1	100	98.865	Cavia_porcellus
ENSCJAG00000010370	SF3A1	100	99.748	ENSCCAG00000032006	SF3A1	100	99.748	Cebus_capucinus
ENSCJAG00000010370	SF3A1	100	99.369	ENSCATG00000029241	SF3A1	100	99.369	Cercocebus_atys
ENSCJAG00000010370	SF3A1	100	98.361	ENSCLAG00000006508	SF3A1	100	98.361	Chinchilla_lanigera
ENSCJAG00000010370	SF3A1	100	99.496	ENSCSAG00000009470	SF3A1	100	99.496	Chlorocebus_sabaeus
ENSCJAG00000010370	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSCJAG00000010370	SF3A1	100	91.310	ENSCPBG00000007595	SF3A1	100	91.436	Chrysemys_picta_bellii
ENSCJAG00000010370	SF3A1	94	52.381	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSCJAG00000010370	SF3A1	96	51.742	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSCJAG00000010370	SF3A1	100	99.496	ENSCANG00000033564	SF3A1	100	99.496	Colobus_angolensis_palliatus
ENSCJAG00000010370	SF3A1	100	98.487	ENSCGRG00001008933	Sf3a1	100	98.487	Cricetulus_griseus_chok1gshd
ENSCJAG00000010370	SF3A1	100	98.487	ENSCGRG00000006127	Sf3a1	100	98.487	Cricetulus_griseus_crigri
ENSCJAG00000010370	SF3A1	100	81.658	ENSCSEG00000010792	sf3a1	98	83.095	Cynoglossus_semilaevis
ENSCJAG00000010370	SF3A1	100	82.893	ENSCVAG00000004560	sf3a1	98	84.115	Cyprinodon_variegatus
ENSCJAG00000010370	SF3A1	100	82.412	ENSDARG00000041887	sf3a1	97	84.746	Danio_rerio
ENSCJAG00000010370	SF3A1	100	98.742	ENSDNOG00000010629	SF3A1	100	98.742	Dasypus_novemcinctus
ENSCJAG00000010370	SF3A1	100	99.117	ENSDORG00000005613	Sf3a1	100	99.117	Dipodomys_ordii
ENSCJAG00000010370	SF3A1	79	61.495	FBgn0266917	Sf3a1	85	59.386	Drosophila_melanogaster
ENSCJAG00000010370	SF3A1	89	96.296	ENSETEG00000017194	SF3A1	100	96.296	Echinops_telfairi
ENSCJAG00000010370	SF3A1	98	65.981	ENSEBUG00000001285	sf3a1	96	67.120	Eptatretus_burgeri
ENSCJAG00000010370	SF3A1	100	99.243	ENSEASG00005010254	SF3A1	100	99.243	Equus_asinus_asinus
ENSCJAG00000010370	SF3A1	100	99.243	ENSECAG00000023962	SF3A1	100	99.243	Equus_caballus
ENSCJAG00000010370	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSCJAG00000010370	SF3A1	100	82.456	ENSELUG00000022578	sf3a1	97	83.984	Esox_lucius
ENSCJAG00000010370	SF3A1	100	99.117	ENSFCAG00000011932	SF3A1	100	99.117	Felis_catus
ENSCJAG00000010370	SF3A1	95	93.519	ENSFALG00000006944	SF3A1	100	92.191	Ficedula_albicollis
ENSCJAG00000010370	SF3A1	100	98.739	ENSFDAG00000009560	SF3A1	100	98.739	Fukomys_damarensis
ENSCJAG00000010370	SF3A1	100	84.403	ENSFHEG00000010866	sf3a1	98	85.417	Fundulus_heteroclitus
ENSCJAG00000010370	SF3A1	100	80.982	ENSGMOG00000016024	sf3a1	97	81.193	Gadus_morhua
ENSCJAG00000010370	SF3A1	95	94.444	ENSGALG00000007937	SF3A1	100	92.695	Gallus_gallus
ENSCJAG00000010370	SF3A1	100	83.019	ENSGAFG00000009111	sf3a1	99	83.269	Gambusia_affinis
ENSCJAG00000010370	SF3A1	100	82.116	ENSGACG00000011893	sf3a1	97	83.508	Gasterosteus_aculeatus
ENSCJAG00000010370	SF3A1	96	91.196	ENSGAGG00000000762	SF3A1	99	91.327	Gopherus_agassizii
ENSCJAG00000010370	SF3A1	100	99.243	ENSGGOG00000012631	SF3A1	100	99.243	Gorilla_gorilla
ENSCJAG00000010370	SF3A1	100	84.383	ENSHBUG00000015795	sf3a1	99	85.275	Haplochromis_burtoni
ENSCJAG00000010370	SF3A1	100	98.991	ENSHGLG00000007907	SF3A1	100	98.991	Heterocephalus_glaber_female
ENSCJAG00000010370	SF3A1	100	98.991	ENSHGLG00100013799	SF3A1	100	98.991	Heterocephalus_glaber_male
ENSCJAG00000010370	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.645	Hippocampus_comes
ENSCJAG00000010370	SF3A1	96	82.552	ENSIPUG00000002470	sf3a1	98	82.812	Ictalurus_punctatus
ENSCJAG00000010370	SF3A1	100	99.243	ENSSTOG00000013892	SF3A1	100	99.243	Ictidomys_tridecemlineatus
ENSCJAG00000010370	SF3A1	100	99.118	ENSJJAG00000022566	Sf3a1	100	99.118	Jaculus_jaculus
ENSCJAG00000010370	SF3A1	100	83.019	ENSKMAG00000002400	sf3a1	98	84.766	Kryptolebias_marmoratus
ENSCJAG00000010370	SF3A1	100	82.516	ENSLBEG00000022974	sf3a1	97	84.052	Labrus_bergylta
ENSCJAG00000010370	SF3A1	100	87.202	ENSLACG00000003565	SF3A1	97	88.411	Latimeria_chalumnae
ENSCJAG00000010370	SF3A1	100	84.962	ENSLOCG00000008251	sf3a1	97	86.753	Lepisosteus_oculatus
ENSCJAG00000010370	SF3A1	100	98.991	ENSLAFG00000000448	SF3A1	100	98.991	Loxodonta_africana
ENSCJAG00000010370	SF3A1	98	61.911	ENSLAFG00000026032	-	98	61.911	Loxodonta_africana
ENSCJAG00000010370	SF3A1	100	99.369	ENSMFAG00000031979	SF3A1	100	99.369	Macaca_fascicularis
ENSCJAG00000010370	SF3A1	100	99.369	ENSMMUG00000005547	SF3A1	100	99.369	Macaca_mulatta
ENSCJAG00000010370	SF3A1	100	99.243	ENSMNEG00000037229	SF3A1	100	99.243	Macaca_nemestrina
ENSCJAG00000010370	SF3A1	100	99.496	ENSMLEG00000041908	SF3A1	100	99.496	Mandrillus_leucophaeus
ENSCJAG00000010370	SF3A1	97	85.640	ENSMAMG00000006460	sf3a1	97	85.770	Mastacembelus_armatus
ENSCJAG00000010370	SF3A1	100	84.383	ENSMZEG00005009633	sf3a1	99	85.275	Maylandia_zebra
ENSCJAG00000010370	SF3A1	95	94.444	ENSMGAG00000001330	SF3A1	100	93.523	Meleagris_gallopavo
ENSCJAG00000010370	SF3A1	92	95.082	ENSMAUG00000020317	Sf3a1	94	95.082	Mesocricetus_auratus
ENSCJAG00000010370	SF3A1	100	99.117	ENSMICG00000010038	SF3A1	100	99.117	Microcebus_murinus
ENSCJAG00000010370	SF3A1	100	98.613	ENSMOCG00000008438	Sf3a1	100	98.613	Microtus_ochrogaster
ENSCJAG00000010370	SF3A1	100	81.761	ENSMMOG00000015588	sf3a1	98	82.368	Mola_mola
ENSCJAG00000010370	SF3A1	100	98.108	ENSMODG00000009270	SF3A1	100	98.108	Monodelphis_domestica
ENSCJAG00000010370	SF3A1	100	84.509	ENSMALG00000000148	sf3a1	99	85.967	Monopterus_albus
ENSCJAG00000010370	SF3A1	100	98.108	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.108	Mus_caroli
ENSCJAG00000010370	SF3A1	100	98.108	ENSMUSG00000002129	Sf3a1	100	98.108	Mus_musculus
ENSCJAG00000010370	SF3A1	100	97.982	MGP_PahariEiJ_G0016862	Sf3a1	100	97.982	Mus_pahari
ENSCJAG00000010370	SF3A1	100	98.108	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.108	Mus_spretus
ENSCJAG00000010370	SF3A1	100	98.865	ENSMPUG00000013144	SF3A1	100	98.865	Mustela_putorius_furo
ENSCJAG00000010370	SF3A1	100	99.243	ENSMLUG00000002139	SF3A1	100	99.243	Myotis_lucifugus
ENSCJAG00000010370	SF3A1	100	98.865	ENSNGAG00000016977	Sf3a1	100	98.865	Nannospalax_galili
ENSCJAG00000010370	SF3A1	100	84.635	ENSNBRG00000016642	sf3a1	96	86.825	Neolamprologus_brichardi
ENSCJAG00000010370	SF3A1	100	99.496	ENSNLEG00000003686	SF3A1	100	99.496	Nomascus_leucogenys
ENSCJAG00000010370	SF3A1	96	88.158	ENSMEUG00000008741	SF3A1	100	88.158	Notamacropus_eugenii
ENSCJAG00000010370	SF3A1	100	98.613	ENSOPRG00000016636	SF3A1	100	98.613	Ochotona_princeps
ENSCJAG00000010370	SF3A1	100	98.865	ENSODEG00000002571	SF3A1	100	98.865	Octodon_degus
ENSCJAG00000010370	SF3A1	100	84.277	ENSONIG00000010848	sf3a1	99	84.655	Oreochromis_niloticus
ENSCJAG00000010370	SF3A1	100	98.739	ENSOCUG00000007633	SF3A1	100	98.739	Oryctolagus_cuniculus
ENSCJAG00000010370	SF3A1	96	81.759	ENSORLG00000013050	sf3a1	99	83.311	Oryzias_latipes
ENSCJAG00000010370	SF3A1	96	82.546	ENSORLG00020003236	sf3a1	94	83.445	Oryzias_latipes_hni
ENSCJAG00000010370	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSCJAG00000010370	SF3A1	100	82.516	ENSOMEG00000013362	sf3a1	99	83.355	Oryzias_melastigma
ENSCJAG00000010370	SF3A1	100	98.739	ENSOGAG00000012931	SF3A1	100	98.739	Otolemur_garnettii
ENSCJAG00000010370	SF3A1	100	97.226	ENSOARG00000006849	SF3A1	100	97.226	Ovis_aries
ENSCJAG00000010370	SF3A1	100	98.235	ENSPPAG00000041790	SF3A1	100	98.235	Pan_paniscus
ENSCJAG00000010370	SF3A1	100	99.117	ENSPPRG00000004391	SF3A1	100	99.117	Panthera_pardus
ENSCJAG00000010370	SF3A1	97	99.093	ENSPTIG00000000844	SF3A1	100	99.093	Panthera_tigris_altaica
ENSCJAG00000010370	SF3A1	100	99.243	ENSPTRG00000014240	SF3A1	100	99.243	Pan_troglodytes
ENSCJAG00000010370	SF3A1	100	99.496	ENSPANG00000020772	SF3A1	100	99.496	Papio_anubis
ENSCJAG00000010370	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSCJAG00000010370	SF3A1	96	84.293	ENSPMGG00000023096	sf3a1	100	84.293	Periophthalmus_magnuspinnatus
ENSCJAG00000010370	SF3A1	100	98.739	ENSPEMG00000009494	Sf3a1	100	98.739	Peromyscus_maniculatus_bairdii
ENSCJAG00000010370	SF3A1	69	77.858	ENSPMAG00000007139	-	90	77.757	Petromyzon_marinus
ENSCJAG00000010370	SF3A1	100	97.856	ENSPCIG00000022692	SF3A1	100	97.856	Phascolarctos_cinereus
ENSCJAG00000010370	SF3A1	100	74.874	ENSPFOG00000016768	sf3a1	93	78.776	Poecilia_formosa
ENSCJAG00000010370	SF3A1	100	83.396	ENSPLAG00000017268	sf3a1	97	84.967	Poecilia_latipinna
ENSCJAG00000010370	SF3A1	84	85.843	ENSPMEG00000019811	sf3a1	98	85.090	Poecilia_mexicana
ENSCJAG00000010370	SF3A1	100	83.522	ENSPREG00000010347	sf3a1	97	85.359	Poecilia_reticulata
ENSCJAG00000010370	SF3A1	100	99.496	ENSPPYG00000011707	SF3A1	100	99.496	Pongo_abelii
ENSCJAG00000010370	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSCJAG00000010370	SF3A1	100	99.369	ENSPCOG00000026630	SF3A1	100	99.369	Propithecus_coquereli
ENSCJAG00000010370	SF3A1	100	94.830	ENSPVAG00000017719	SF3A1	94	98.255	Pteropus_vampyrus
ENSCJAG00000010370	SF3A1	100	84.383	ENSPNYG00000018706	sf3a1	99	85.275	Pundamilia_nyererei
ENSCJAG00000010370	SF3A1	96	85.306	ENSPNAG00000003721	sf3a1	98	85.176	Pygocentrus_nattereri
ENSCJAG00000010370	SF3A1	100	98.361	ENSRNOG00000005218	Sf3a1	100	98.361	Rattus_norvegicus
ENSCJAG00000010370	SF3A1	100	99.496	ENSRBIG00000032167	SF3A1	100	99.496	Rhinopithecus_bieti
ENSCJAG00000010370	SF3A1	100	99.496	ENSRROG00000044908	SF3A1	100	99.496	Rhinopithecus_roxellana
ENSCJAG00000010370	SF3A1	97	95.478	ENSSBOG00000021960	SF3A1	100	99.852	Saimiri_boliviensis_boliviensis
ENSCJAG00000010370	SF3A1	99	93.671	ENSSHAG00000003666	SF3A1	98	95.343	Sarcophilus_harrisii
ENSCJAG00000010370	SF3A1	100	83.125	ENSSFOG00015004579	sf3a1	99	84.872	Scleropages_formosus
ENSCJAG00000010370	SF3A1	100	81.761	ENSSMAG00000004275	sf3a1	97	82.876	Scophthalmus_maximus
ENSCJAG00000010370	SF3A1	100	83.750	ENSSDUG00000022219	sf3a1	99	84.399	Seriola_dumerili
ENSCJAG00000010370	SF3A1	100	83.750	ENSSLDG00000012642	sf3a1	99	84.399	Seriola_lalandi_dorsalis
ENSCJAG00000010370	SF3A1	97	95.855	ENSSARG00000005960	SF3A1	100	95.855	Sorex_araneus
ENSCJAG00000010370	SF3A1	96	92.098	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSCJAG00000010370	SF3A1	100	84.403	ENSSPAG00000011856	sf3a1	99	84.783	Stegastes_partitus
ENSCJAG00000010370	SF3A1	100	98.991	ENSSSCG00000010002	SF3A1	100	98.991	Sus_scrofa
ENSCJAG00000010370	SF3A1	95	94.327	ENSTGUG00000010547	SF3A1	99	93.904	Taeniopygia_guttata
ENSCJAG00000010370	SF3A1	100	81.635	ENSTRUG00000006118	sf3a1	97	82.353	Takifugu_rubripes
ENSCJAG00000010370	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSCJAG00000010370	SF3A1	100	91.677	ENSTBEG00000012771	SF3A1	100	91.677	Tupaia_belangeri
ENSCJAG00000010370	SF3A1	100	98.741	ENSTTRG00000001535	SF3A1	100	98.741	Tursiops_truncatus
ENSCJAG00000010370	SF3A1	99	98.094	ENSUAMG00000006750	SF3A1	99	98.094	Ursus_americanus
ENSCJAG00000010370	SF3A1	99	98.087	ENSUMAG00000016665	SF3A1	99	98.087	Ursus_maritimus
ENSCJAG00000010370	SF3A1	100	98.865	ENSVVUG00000003075	SF3A1	100	98.865	Vulpes_vulpes
ENSCJAG00000010370	SF3A1	100	85.822	ENSXETG00000016144	sf3a1	97	86.727	Xenopus_tropicalis
ENSCJAG00000010370	SF3A1	100	82.767	ENSXCOG00000015653	sf3a1	99	83.014	Xiphophorus_couchianus
ENSCJAG00000010370	SF3A1	100	82.893	ENSXMAG00000002753	sf3a1	99	83.142	Xiphophorus_maculatus