EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000010444 (Gene tree)
Gene ID: 100408848
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 508733 bases
Position: chrNTIC01011112.1:87563295-88072027
Accession: 25365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000019298	Arb2	PF09757.9	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000020372	FAM172A-204	885	-	ENSCJAP00000019286	294 (aa)	-	F6STF3
ENSCJAT00000020393	FAM172A-203	1254	-	ENSCJAP00000019307	417 (aa)	-	F6RXB2
ENSCJAT00000020384	FAM172A-201	1700	-	ENSCJAP00000019298	416 (aa)	-	F6SI68
ENSCJAT00000020432	FAM172A-202	921	-	ENSCJAP00000019345	306 (aa)	-	F6QZT3

Gene Model

Click here to download ENSCJAG00000010444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000010444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000010444	FAM172A	100	99.038	ENSG00000113391	FAM172A	100	99.038	Homo_sapiens
ENSCJAG00000010444	FAM172A	54	39.394	ENSAPLG00000011555	-	97	39.394	Anas_platyrhynchos
ENSCJAG00000010444	FAM172A	100	87.019	ENSAPLG00000004055	FAM172A	97	88.119	Anas_platyrhynchos
ENSCJAG00000010444	FAM172A	91	87.566	ENSACAG00000013305	FAM172A	95	89.071	Anolis_carolinensis
ENSCJAG00000010444	FAM172A	97	84.826	ENSANAG00000035869	FAM172A	93	100.000	Aotus_nancymaae
ENSCJAG00000010444	FAM172A	100	97.837	ENSBTAG00000050195	FAM172A	100	97.837	Bos_taurus
ENSCJAG00000010444	FAM172A	89	98.919	ENSCAFG00000008064	FAM172A	99	98.919	Canis_familiaris
ENSCJAG00000010444	FAM172A	100	97.356	ENSCAFG00020006210	FAM172A	100	97.356	Canis_lupus_dingo
ENSCJAG00000010444	FAM172A	100	97.596	ENSCHIG00000008440	FAM172A	100	97.596	Capra_hircus
ENSCJAG00000010444	FAM172A	64	97.744	ENSTSYG00000006286	FAM172A	85	97.744	Carlito_syrichta
ENSCJAG00000010444	FAM172A	54	85.841	ENSCAPG00000014103	-	100	85.841	Cavia_aperea
ENSCJAG00000010444	FAM172A	100	99.519	ENSCCAG00000023116	FAM172A	100	99.519	Cebus_capucinus
ENSCJAG00000010444	FAM172A	100	88.221	ENSCLAG00000005472	FAM172A	100	98.734	Chinchilla_lanigera
ENSCJAG00000010444	FAM172A	86	43.902	ENSCPBG00000004402	-	96	43.902	Chrysemys_picta_bellii
ENSCJAG00000010444	FAM172A	65	98.148	ENSCANG00000040412	FAM172A	92	98.148	Colobus_angolensis_palliatus
ENSCJAG00000010444	FAM172A	100	98.077	ENSDNOG00000004689	FAM172A	100	98.077	Dasypus_novemcinctus
ENSCJAG00000010444	FAM172A	65	97.407	ENSDORG00000013558	Fam172a	88	97.407	Dipodomys_ordii
ENSCJAG00000010444	FAM172A	79	40.000	ENSEBUG00000016097	-	62	40.000	Eptatretus_burgeri
ENSCJAG00000010444	FAM172A	97	95.062	ENSECAG00000018274	FAM172A	98	96.477	Equus_caballus
ENSCJAG00000010444	FAM172A	100	85.096	ENSEEUG00000002887	FAM172A	100	85.096	Erinaceus_europaeus
ENSCJAG00000010444	FAM172A	98	69.024	ENSELUG00000017647	fam172a	96	69.287	Esox_lucius
ENSCJAG00000010444	FAM172A	100	98.317	ENSFCAG00000025443	FAM172A	100	98.317	Felis_catus
ENSCJAG00000010444	FAM172A	86	43.733	ENSFALG00000006501	-	100	43.733	Ficedula_albicollis
ENSCJAG00000010444	FAM172A	87	88.430	ENSFALG00000009072	FAM172A	95	89.859	Ficedula_albicollis
ENSCJAG00000010444	FAM172A	100	87.260	ENSGALG00000014661	FAM172A	97	88.861	Gallus_gallus
ENSCJAG00000010444	FAM172A	100	90.865	ENSGAGG00000003839	FAM172A	97	91.832	Gopherus_agassizii
ENSCJAG00000010444	FAM172A	84	45.326	ENSGAGG00000022828	-	93	45.326	Gopherus_agassizii
ENSCJAG00000010444	FAM172A	100	98.798	ENSGGOG00000010296	FAM172A	100	98.798	Gorilla_gorilla
ENSCJAG00000010444	FAM172A	97	95.062	ENSHGLG00000011178	FAM172A	100	97.468	Heterocephalus_glaber_female
ENSCJAG00000010444	FAM172A	89	97.290	ENSHGLG00100013340	FAM172A	100	97.468	Heterocephalus_glaber_male
ENSCJAG00000010444	FAM172A	100	97.837	ENSSTOG00000009918	FAM172A	100	97.837	Ictidomys_tridecemlineatus
ENSCJAG00000010444	FAM172A	90	47.480	ENSLACG00000001532	si:ch73-41e3.7	100	47.480	Latimeria_chalumnae
ENSCJAG00000010444	FAM172A	100	75.179	ENSLOCG00000001629	fam172a	97	77.037	Lepisosteus_oculatus
ENSCJAG00000010444	FAM172A	65	98.148	ENSMFAG00000001171	FAM172A	92	98.148	Macaca_fascicularis
ENSCJAG00000010444	FAM172A	92	98.950	ENSMNEG00000039938	FAM172A	92	98.148	Macaca_nemestrina
ENSCJAG00000010444	FAM172A	100	99.038	ENSMICG00000030403	FAM172A	100	99.038	Microcebus_murinus
ENSCJAG00000010444	FAM172A	89	94.595	ENSMOCG00000003613	Fam172a	100	94.595	Microtus_ochrogaster
ENSCJAG00000010444	FAM172A	100	90.385	ENSMODG00000020131	FAM172A	97	91.089	Monodelphis_domestica
ENSCJAG00000010444	FAM172A	89	65.676	MGP_PahariEiJ_G0015818	Fam172a	100	65.676	Mus_pahari
ENSCJAG00000010444	FAM172A	89	97.568	ENSNGAG00000019570	Fam172a	100	97.568	Nannospalax_galili
ENSCJAG00000010444	FAM172A	65	98.148	ENSNLEG00000013903	FAM172A	89	98.148	Nomascus_leucogenys
ENSCJAG00000010444	FAM172A	89	89.189	ENSOANG00000011068	FAM172A	95	91.573	Ornithorhynchus_anatinus
ENSCJAG00000010444	FAM172A	97	98.025	ENSOCUG00000007299	FAM172A	96	98.025	Oryctolagus_cuniculus
ENSCJAG00000010444	FAM172A	100	96.154	ENSOGAG00000015189	FAM172A	100	96.154	Otolemur_garnettii
ENSCJAG00000010444	FAM172A	89	94.892	ENSOARG00000016711	FAM172A	85	94.892	Ovis_aries
ENSCJAG00000010444	FAM172A	65	97.778	ENSPPAG00000030542	FAM172A	92	97.778	Pan_paniscus
ENSCJAG00000010444	FAM172A	100	98.317	ENSPPRG00000006653	FAM172A	100	98.317	Panthera_pardus
ENSCJAG00000010444	FAM172A	100	98.317	ENSPTIG00000012681	FAM172A	100	98.317	Panthera_tigris_altaica
ENSCJAG00000010444	FAM172A	65	97.778	ENSPTRG00000017074	FAM172A	92	97.778	Pan_troglodytes
ENSCJAG00000010444	FAM172A	65	98.148	ENSPANG00000011687	FAM172A	92	98.148	Papio_anubis
ENSCJAG00000010444	FAM172A	97	72.906	ENSPKIG00000012314	fam172a	96	83.516	Paramormyrops_kingsleyae
ENSCJAG00000010444	FAM172A	100	95.192	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSCJAG00000010444	FAM172A	100	90.144	ENSPCIG00000028612	FAM172A	97	91.089	Phascolarctos_cinereus
ENSCJAG00000010444	FAM172A	55	98.253	ENSPCOG00000024072	FAM172A	93	98.253	Propithecus_coquereli
ENSCJAG00000010444	FAM172A	65	93.680	ENSRNOG00000013844	Fam172a	99	93.680	Rattus_norvegicus
ENSCJAG00000010444	FAM172A	53	77.578	ENSRBIG00000028680	-	93	77.578	Rhinopithecus_bieti
ENSCJAG00000010444	FAM172A	65	98.148	ENSRROG00000023807	FAM172A	92	98.148	Rhinopithecus_roxellana
ENSCJAG00000010444	FAM172A	100	99.760	ENSSBOG00000019860	FAM172A	100	99.760	Saimiri_boliviensis_boliviensis
ENSCJAG00000010444	FAM172A	100	89.904	ENSSHAG00000013743	FAM172A	97	90.594	Sarcophilus_harrisii
ENSCJAG00000010444	FAM172A	100	87.500	ENSSPUG00000008161	FAM172A	97	88.861	Sphenodon_punctatus
ENSCJAG00000010444	FAM172A	100	98.317	ENSSSCG00000027608	FAM172A	100	98.649	Sus_scrofa
ENSCJAG00000010444	FAM172A	91	87.105	ENSTGUG00000000715	FAM172A	100	87.105	Taeniopygia_guttata
ENSCJAG00000010444	FAM172A	80	46.726	ENSTGUG00000013623	-	100	46.726	Taeniopygia_guttata
ENSCJAG00000010444	FAM172A	78	56.970	ENSTNIG00000009902	fam172a	99	59.036	Tetraodon_nigroviridis
ENSCJAG00000010444	FAM172A	100	94.712	ENSTTRG00000001521	FAM172A	97	94.815	Tursiops_truncatus
ENSCJAG00000010444	FAM172A	100	98.798	ENSUMAG00000005442	FAM172A	100	98.798	Ursus_maritimus
ENSCJAG00000010444	FAM172A	100	97.356	ENSVVUG00000022112	FAM172A	100	97.356	Vulpes_vulpes
ENSCJAG00000010444	FAM172A	98	81.707	ENSXETG00000011592	fam172a	96	81.773	Xenopus_tropicalis
ENSCJAG00000010444	FAM172A	91	42.969	ENSXETG00000033027	-	99	42.969	Xenopus_tropicalis