EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000010840 (Gene tree)
Gene ID: 100398174
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 38567 bases
Position: chrNTIC01000001.1:70984244-71022810
Accession: 100398174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000020078	MIF4G_like	PF09088.11	3.6e-36	1	1
ENSCJAP00000057390	MIF4G_like	PF09088.11	3.7e-36	1	1
ENSCJAP00000020092	MIF4G_like	PF09088.11	4e-36	1	1
ENSCJAP00000020106	MIF4G_like	PF09088.11	4e-36	1	1
ENSCJAP00000059780	MIF4G_like	PF09088.11	7e-11	1	1
ENSCJAP00000020106	MIF4G_like_2	PF09090.11	1.6e-85	1	1
ENSCJAP00000020092	MIF4G_like_2	PF09090.11	1.6e-85	1	1
ENSCJAP00000057390	MIF4G_like_2	PF09090.11	2.8e-85	1	1
ENSCJAP00000020078	MIF4G_like_2	PF09090.11	2.8e-85	1	1
ENSCJAP00000059780	MIF4G	PF02854.19	2.9e-31	1	1
ENSCJAP00000020092	MIF4G	PF02854.19	1.3e-30	1	1
ENSCJAP00000020106	MIF4G	PF02854.19	1.4e-30	1	1
ENSCJAP00000057390	MIF4G	PF02854.19	1.4e-30	1	1
ENSCJAP00000020078	MIF4G	PF02854.19	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000021230	NCBP1-203	2370	-	ENSCJAP00000020092	789 (aa)	-	F7H7F0
ENSCJAT00000021245	NCBP1-201	2464	-	ENSCJAP00000020106	790 (aa)	XP_002743159	F7GRU0
ENSCJAT00000076455	NCBP1-206	249	-	ENSCJAP00000060756	82 (aa)	-	A0A2R8MJJ1
ENSCJAT00000083613	NCBP1-205	1260	-	ENSCJAP00000059780	419 (aa)	-	A0A2R8MHI5
ENSCJAT00000021216	NCBP1-204	2172	-	ENSCJAP00000020078	723 (aa)	-	F7HCL0
ENSCJAT00000083308	NCBP1-202	2248	-	ENSCJAP00000057390	718 (aa)	-	A0A2R8MCM2

Gene Model

Click here to download ENSCJAG00000010840's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03013	RNA transport	KEGG
cjc03015	mRNA surveillance pathway	KEGG
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000010840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000010840	NCBP1	100	100.000	ENSG00000136937	NCBP1	100	99.747	Homo_sapiens
ENSCJAG00000010840	NCBP1	99	87.143	ENSAPOG00000008002	NCBP1	99	83.123	Acanthochromis_polyacanthus
ENSCJAG00000010840	NCBP1	100	99.390	ENSAMEG00000004763	NCBP1	100	99.242	Ailuropoda_melanoleuca
ENSCJAG00000010840	NCBP1	99	86.905	ENSACIG00000000274	NCBP1	99	83.480	Amphilophus_citrinellus
ENSCJAG00000010840	NCBP1	99	86.905	ENSAOCG00000021148	NCBP1	99	83.249	Amphiprion_ocellaris
ENSCJAG00000010840	NCBP1	99	86.905	ENSAPEG00000001701	NCBP1	99	83.249	Amphiprion_percula
ENSCJAG00000010840	NCBP1	99	86.344	ENSATEG00000006929	NCBP1	99	82.620	Anabas_testudineus
ENSCJAG00000010840	NCBP1	99	90.247	ENSAPLG00000016318	NCBP1	100	90.885	Anas_platyrhynchos
ENSCJAG00000010840	NCBP1	100	87.391	ENSACAG00000004409	NCBP1	87	87.266	Anolis_carolinensis
ENSCJAG00000010840	NCBP1	100	99.862	ENSANAG00000025744	NCBP1	100	99.862	Aotus_nancymaae
ENSCJAG00000010840	NCBP1	99	86.905	ENSACLG00000014812	NCBP1	99	83.101	Astatotilapia_calliptera
ENSCJAG00000010840	NCBP1	99	85.952	ENSAMXG00000016364	NCBP1	99	81.407	Astyanax_mexicanus
ENSCJAG00000010840	NCBP1	100	99.390	ENSBTAG00000009732	NCBP1	100	99.114	Bos_taurus
ENSCJAG00000010840	NCBP1	99	40.336	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
ENSCJAG00000010840	NCBP1	100	99.620	ENSCAFG00000002445	NCBP1	100	99.620	Canis_familiaris
ENSCJAG00000010840	NCBP1	100	99.447	ENSCAFG00020017997	NCBP1	100	99.561	Canis_lupus_dingo
ENSCJAG00000010840	NCBP1	100	98.984	ENSCHIG00000020139	NCBP1	100	98.861	Capra_hircus
ENSCJAG00000010840	NCBP1	98	97.821	ENSTSYG00000011914	NCBP1	99	99.071	Carlito_syrichta
ENSCJAG00000010840	NCBP1	79	99.342	ENSCAPG00000014252	NCBP1	91	88.820	Cavia_aperea
ENSCJAG00000010840	NCBP1	99	99.441	ENSCPOG00000012573	NCBP1	99	97.653	Cavia_porcellus
ENSCJAG00000010840	NCBP1	100	100.000	ENSCCAG00000032297	NCBP1	100	99.873	Cebus_capucinus
ENSCJAG00000010840	NCBP1	100	100.000	ENSCATG00000010052	NCBP1	100	99.747	Cercocebus_atys
ENSCJAG00000010840	NCBP1	100	99.620	ENSCLAG00000014339	NCBP1	100	99.620	Chinchilla_lanigera
ENSCJAG00000010840	NCBP1	100	100.000	ENSCSAG00000010929	NCBP1	100	99.747	Chlorocebus_sabaeus
ENSCJAG00000010840	NCBP1	91	97.458	ENSCHOG00000010332	NCBP1	91	97.458	Choloepus_hoffmanni
ENSCJAG00000010840	NCBP1	100	90.749	ENSCPBG00000024344	NCBP1	100	90.385	Chrysemys_picta_bellii
ENSCJAG00000010840	NCBP1	99	56.306	ENSCING00000008990	-	99	54.235	Ciona_intestinalis
ENSCJAG00000010840	NCBP1	99	56.306	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSCJAG00000010840	NCBP1	100	100.000	ENSCANG00000036913	NCBP1	100	99.747	Colobus_angolensis_palliatus
ENSCJAG00000010840	NCBP1	100	99.119	ENSCGRG00001015771	Ncbp1	100	98.608	Cricetulus_griseus_chok1gshd
ENSCJAG00000010840	NCBP1	99	99.539	ENSCGRG00000010311	Ncbp1	100	98.718	Cricetulus_griseus_crigri
ENSCJAG00000010840	NCBP1	99	86.190	ENSCSEG00000012377	NCBP1	99	83.217	Cynoglossus_semilaevis
ENSCJAG00000010840	NCBP1	99	85.463	ENSCVAG00000008795	NCBP1	99	81.635	Cyprinodon_variegatus
ENSCJAG00000010840	NCBP1	100	99.559	ENSDNOG00000006885	NCBP1	100	98.354	Dasypus_novemcinctus
ENSCJAG00000010840	NCBP1	100	97.967	ENSDORG00000013652	Ncbp1	100	94.332	Dipodomys_ordii
ENSCJAG00000010840	NCBP1	98	31.529	FBgn0038887	CG7907	87	33.578	Drosophila_melanogaster
ENSCJAG00000010840	NCBP1	99	59.809	FBgn0022942	Cbp80	100	57.875	Drosophila_melanogaster
ENSCJAG00000010840	NCBP1	95	93.886	ENSETEG00000009705	NCBP1	89	93.886	Echinops_telfairi
ENSCJAG00000010840	NCBP1	100	75.238	ENSEBUG00000008386	NCBP1	100	73.459	Eptatretus_burgeri
ENSCJAG00000010840	NCBP1	100	99.559	ENSEASG00005022795	NCBP1	100	99.114	Equus_asinus_asinus
ENSCJAG00000010840	NCBP1	100	99.559	ENSECAG00000013847	NCBP1	100	99.241	Equus_caballus
ENSCJAG00000010840	NCBP1	95	93.891	ENSEEUG00000015973	NCBP1	99	93.493	Erinaceus_europaeus
ENSCJAG00000010840	NCBP1	98	86.650	ENSELUG00000022519	NCBP1	99	81.635	Esox_lucius
ENSCJAG00000010840	NCBP1	100	99.593	ENSFCAG00000001206	NCBP1	100	99.494	Felis_catus
ENSCJAG00000010840	NCBP1	99	89.575	ENSFALG00000001193	NCBP1	100	89.695	Ficedula_albicollis
ENSCJAG00000010840	NCBP1	100	99.559	ENSFDAG00000010864	NCBP1	100	99.367	Fukomys_damarensis
ENSCJAG00000010840	NCBP1	99	85.903	ENSFHEG00000000655	NCBP1	99	82.013	Fundulus_heteroclitus
ENSCJAG00000010840	NCBP1	99	84.762	ENSGMOG00000008653	NCBP1	99	79.623	Gadus_morhua
ENSCJAG00000010840	NCBP1	99	90.859	ENSGALG00000002087	NCBP1	100	90.416	Gallus_gallus
ENSCJAG00000010840	NCBP1	99	86.429	ENSGAFG00000017787	NCBP1	99	82.890	Gambusia_affinis
ENSCJAG00000010840	NCBP1	99	85.748	ENSGACG00000016772	NCBP1	98	81.681	Gasterosteus_aculeatus
ENSCJAG00000010840	NCBP1	100	90.110	ENSGAGG00000019483	NCBP1	100	90.247	Gopherus_agassizii
ENSCJAG00000010840	NCBP1	100	100.000	ENSGGOG00000001376	NCBP1	100	99.747	Gorilla_gorilla
ENSCJAG00000010840	NCBP1	99	86.905	ENSHBUG00000020843	NCBP1	99	82.872	Haplochromis_burtoni
ENSCJAG00000010840	NCBP1	100	99.593	ENSHGLG00000001882	NCBP1	100	99.494	Heterocephalus_glaber_female
ENSCJAG00000010840	NCBP1	100	92.480	ENSHGLG00000018112	-	100	86.869	Heterocephalus_glaber_female
ENSCJAG00000010840	NCBP1	100	99.593	ENSHGLG00100013014	NCBP1	100	99.494	Heterocephalus_glaber_male
ENSCJAG00000010840	NCBP1	100	92.480	ENSHGLG00100017373	-	100	86.616	Heterocephalus_glaber_male
ENSCJAG00000010840	NCBP1	86	72.381	ENSHCOG00000000204	NCBP1	92	72.381	Hippocampus_comes
ENSCJAG00000010840	NCBP1	99	85.022	ENSIPUG00000007275	ncbp1	99	82.013	Ictalurus_punctatus
ENSCJAG00000010840	NCBP1	100	100.000	ENSSTOG00000002695	NCBP1	100	99.620	Ictidomys_tridecemlineatus
ENSCJAG00000010840	NCBP1	99	85.903	ENSKMAG00000003594	NCBP1	99	86.382	Kryptolebias_marmoratus
ENSCJAG00000010840	NCBP1	99	85.463	ENSLBEG00000011661	NCBP1	99	80.870	Labrus_bergylta
ENSCJAG00000010840	NCBP1	97	89.487	ENSLACG00000013955	NCBP1	100	79.975	Latimeria_chalumnae
ENSCJAG00000010840	NCBP1	99	72.444	ENSLOCG00000009579	NCBP1	99	72.444	Lepisosteus_oculatus
ENSCJAG00000010840	NCBP1	100	99.119	ENSLAFG00000005999	NCBP1	100	98.861	Loxodonta_africana
ENSCJAG00000010840	NCBP1	100	100.000	ENSMFAG00000030994	NCBP1	100	99.747	Macaca_fascicularis
ENSCJAG00000010840	NCBP1	99	99.743	ENSMMUG00000012281	NCBP1	99	99.743	Macaca_mulatta
ENSCJAG00000010840	NCBP1	100	100.000	ENSMNEG00000042790	NCBP1	100	99.747	Macaca_nemestrina
ENSCJAG00000010840	NCBP1	100	100.000	ENSMLEG00000030374	NCBP1	100	99.747	Mandrillus_leucophaeus
ENSCJAG00000010840	NCBP1	99	85.903	ENSMAMG00000014806	NCBP1	99	82.997	Mastacembelus_armatus
ENSCJAG00000010840	NCBP1	97	86.408	ENSMZEG00005009290	-	99	82.812	Maylandia_zebra
ENSCJAG00000010840	NCBP1	99	86.905	ENSMZEG00005003469	NCBP1	99	82.872	Maylandia_zebra
ENSCJAG00000010840	NCBP1	100	98.678	ENSMAUG00000020583	Ncbp1	99	97.964	Mesocricetus_auratus
ENSCJAG00000010840	NCBP1	100	99.559	ENSMICG00000012682	NCBP1	100	99.367	Microcebus_murinus
ENSCJAG00000010840	NCBP1	100	98.678	ENSMOCG00000015818	Ncbp1	100	98.228	Microtus_ochrogaster
ENSCJAG00000010840	NCBP1	99	82.633	ENSMMOG00000002610	NCBP1	99	82.493	Mola_mola
ENSCJAG00000010840	NCBP1	100	95.325	ENSMODG00000003202	NCBP1	99	93.671	Monodelphis_domestica
ENSCJAG00000010840	NCBP1	99	86.429	ENSMALG00000003547	NCBP1	99	82.116	Monopterus_albus
ENSCJAG00000010840	NCBP1	100	98.678	MGP_CAROLIEiJ_G0025982	Ncbp1	100	98.228	Mus_caroli
ENSCJAG00000010840	NCBP1	100	98.678	ENSMUSG00000028330	Ncbp1	100	98.228	Mus_musculus
ENSCJAG00000010840	NCBP1	100	98.678	MGP_PahariEiJ_G0028318	Ncbp1	100	98.481	Mus_pahari
ENSCJAG00000010840	NCBP1	100	98.678	MGP_SPRETEiJ_G0026945	Ncbp1	100	98.228	Mus_spretus
ENSCJAG00000010840	NCBP1	100	99.559	ENSMPUG00000006399	NCBP1	100	99.494	Mustela_putorius_furo
ENSCJAG00000010840	NCBP1	99	98.322	ENSMLUG00000015201	NCBP1	100	98.074	Myotis_lucifugus
ENSCJAG00000010840	NCBP1	100	98.238	ENSNGAG00000014101	Ncbp1	100	98.228	Nannospalax_galili
ENSCJAG00000010840	NCBP1	85	82.449	ENSNBRG00000014674	NCBP1	97	86.784	Neolamprologus_brichardi
ENSCJAG00000010840	NCBP1	100	100.000	ENSNLEG00000016909	NCBP1	100	99.747	Nomascus_leucogenys
ENSCJAG00000010840	NCBP1	89	95.045	ENSMEUG00000010672	NCBP1	90	92.793	Notamacropus_eugenii
ENSCJAG00000010840	NCBP1	83	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSCJAG00000010840	NCBP1	100	99.559	ENSODEG00000003232	NCBP1	100	99.367	Octodon_degus
ENSCJAG00000010840	NCBP1	99	87.225	ENSONIG00000001502	NCBP1	99	82.872	Oreochromis_niloticus
ENSCJAG00000010840	NCBP1	98	93.659	ENSOANG00000001918	NCBP1	100	95.827	Ornithorhynchus_anatinus
ENSCJAG00000010840	NCBP1	98	98.954	ENSOCUG00000013853	NCBP1	97	98.843	Oryctolagus_cuniculus
ENSCJAG00000010840	NCBP1	98	86.893	ENSORLG00000011008	NCBP1	99	80.952	Oryzias_latipes
ENSCJAG00000010840	NCBP1	98	86.893	ENSORLG00020017455	NCBP1	99	80.952	Oryzias_latipes_hni
ENSCJAG00000010840	NCBP1	98	86.893	ENSORLG00015012127	NCBP1	99	81.078	Oryzias_latipes_hsok
ENSCJAG00000010840	NCBP1	99	86.715	ENSOMEG00000020698	NCBP1	99	81.830	Oryzias_melastigma
ENSCJAG00000010840	NCBP1	100	99.593	ENSOGAG00000013888	NCBP1	100	99.495	Otolemur_garnettii
ENSCJAG00000010840	NCBP1	100	98.984	ENSOARG00000011233	NCBP1	100	98.861	Ovis_aries
ENSCJAG00000010840	NCBP1	100	100.000	ENSPPAG00000026462	NCBP1	100	99.747	Pan_paniscus
ENSCJAG00000010840	NCBP1	100	99.620	ENSPPRG00000022574	NCBP1	100	99.620	Panthera_pardus
ENSCJAG00000010840	NCBP1	100	99.620	ENSPTIG00000018507	NCBP1	100	99.620	Panthera_tigris_altaica
ENSCJAG00000010840	NCBP1	100	100.000	ENSPTRG00000021167	NCBP1	100	99.747	Pan_troglodytes
ENSCJAG00000010840	NCBP1	100	100.000	ENSPANG00000025591	NCBP1	100	99.747	Papio_anubis
ENSCJAG00000010840	NCBP1	99	85.476	ENSPKIG00000015861	NCBP1	100	81.006	Paramormyrops_kingsleyae
ENSCJAG00000010840	NCBP1	70	89.648	ENSPSIG00000009558	NCBP1	100	89.844	Pelodiscus_sinensis
ENSCJAG00000010840	NCBP1	99	85.022	ENSPMGG00000020476	NCBP1	99	79.093	Periophthalmus_magnuspinnatus
ENSCJAG00000010840	NCBP1	100	98.238	ENSPEMG00000020105	Ncbp1	100	98.101	Peromyscus_maniculatus_bairdii
ENSCJAG00000010840	NCBP1	100	76.905	ENSPMAG00000005533	NCBP1	100	67.746	Petromyzon_marinus
ENSCJAG00000010840	NCBP1	100	95.122	ENSPCIG00000015800	NCBP1	99	94.715	Phascolarctos_cinereus
ENSCJAG00000010840	NCBP1	99	85.952	ENSPFOG00000004158	NCBP1	99	81.830	Poecilia_formosa
ENSCJAG00000010840	NCBP1	99	85.714	ENSPLAG00000020002	NCBP1	99	82.264	Poecilia_latipinna
ENSCJAG00000010840	NCBP1	99	85.952	ENSPMEG00000019821	NCBP1	99	82.264	Poecilia_mexicana
ENSCJAG00000010840	NCBP1	99	85.714	ENSPREG00000006035	NCBP1	99	82.161	Poecilia_reticulata
ENSCJAG00000010840	NCBP1	100	100.000	ENSPPYG00000019426	NCBP1	100	99.747	Pongo_abelii
ENSCJAG00000010840	NCBP1	89	100.000	ENSPCAG00000009943	NCBP1	85	99.310	Procavia_capensis
ENSCJAG00000010840	NCBP1	90	99.222	ENSPCOG00000020024	NCBP1	99	99.187	Propithecus_coquereli
ENSCJAG00000010840	NCBP1	100	99.119	ENSPVAG00000005924	NCBP1	100	98.987	Pteropus_vampyrus
ENSCJAG00000010840	NCBP1	99	83.101	ENSPNYG00000002140	NCBP1	99	83.101	Pundamilia_nyererei
ENSCJAG00000010840	NCBP1	99	85.463	ENSPNAG00000027753	NCBP1	99	81.784	Pygocentrus_nattereri
ENSCJAG00000010840	NCBP1	100	98.678	ENSRNOG00000023605	Ncbp1	100	98.354	Rattus_norvegicus
ENSCJAG00000010840	NCBP1	100	100.000	ENSRBIG00000043175	NCBP1	100	99.747	Rhinopithecus_bieti
ENSCJAG00000010840	NCBP1	100	100.000	ENSRROG00000029767	NCBP1	100	99.747	Rhinopithecus_roxellana
ENSCJAG00000010840	NCBP1	100	100.000	ENSSBOG00000019378	NCBP1	100	99.873	Saimiri_boliviensis_boliviensis
ENSCJAG00000010840	NCBP1	69	95.720	ENSSHAG00000015882	NCBP1	73	95.720	Sarcophilus_harrisii
ENSCJAG00000010840	NCBP1	96	86.070	ENSSFOG00015001872	NCBP1	100	80.691	Scleropages_formosus
ENSCJAG00000010840	NCBP1	99	85.463	ENSSMAG00000007463	NCBP1	99	81.738	Scophthalmus_maximus
ENSCJAG00000010840	NCBP1	99	86.429	ENSSDUG00000007019	NCBP1	100	82.990	Seriola_dumerili
ENSCJAG00000010840	NCBP1	98	87.379	ENSSLDG00000021924	NCBP1	99	82.746	Seriola_lalandi_dorsalis
ENSCJAG00000010840	NCBP1	94	90.830	ENSSARG00000007274	NCBP1	87	90.830	Sorex_araneus
ENSCJAG00000010840	NCBP1	100	83.529	ENSSPUG00000008609	NCBP1	100	83.529	Sphenodon_punctatus
ENSCJAG00000010840	NCBP1	99	86.905	ENSSPAG00000012550	NCBP1	99	83.249	Stegastes_partitus
ENSCJAG00000010840	NCBP1	100	99.559	ENSSSCG00000005366	NCBP1	100	99.494	Sus_scrofa
ENSCJAG00000010840	NCBP1	100	89.135	ENSTGUG00000001472	NCBP1	100	84.151	Taeniopygia_guttata
ENSCJAG00000010840	NCBP1	99	85.476	ENSTRUG00000005287	NCBP1	99	81.612	Takifugu_rubripes
ENSCJAG00000010840	NCBP1	100	99.559	ENSTBEG00000004035	NCBP1	100	95.949	Tupaia_belangeri
ENSCJAG00000010840	NCBP1	97	99.507	ENSTTRG00000000507	NCBP1	88	99.507	Tursiops_truncatus
ENSCJAG00000010840	NCBP1	100	99.559	ENSUAMG00000005471	NCBP1	100	99.494	Ursus_americanus
ENSCJAG00000010840	NCBP1	100	96.828	ENSUMAG00000011865	NCBP1	100	99.561	Ursus_maritimus
ENSCJAG00000010840	NCBP1	100	99.593	ENSVPAG00000010537	NCBP1	100	95.190	Vicugna_pacos
ENSCJAG00000010840	NCBP1	100	99.620	ENSVVUG00000019725	NCBP1	100	99.620	Vulpes_vulpes
ENSCJAG00000010840	NCBP1	100	81.542	ENSXETG00000010179	ncbp1	100	81.542	Xenopus_tropicalis
ENSCJAG00000010840	NCBP1	99	85.952	ENSXMAG00000018253	NCBP1	99	82.390	Xiphophorus_maculatus