EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000010978 (Gene tree)
Gene ID: 100406410
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 19944 bases
Position: chrNTIC01000001.1:15974440-15994383
Accession: 13071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000020301	zf-C2H2	PF00096.26	3e-26	1	5
ENSCJAP00000020301	zf-C2H2	PF00096.26	3e-26	2	5
ENSCJAP00000020301	zf-C2H2	PF00096.26	3e-26	3	5
ENSCJAP00000020301	zf-C2H2	PF00096.26	3e-26	4	5
ENSCJAP00000020301	zf-C2H2	PF00096.26	3e-26	5	5
ENSCJAP00000020287	zf-C2H2	PF00096.26	6e-20	1	4
ENSCJAP00000020287	zf-C2H2	PF00096.26	6e-20	2	4
ENSCJAP00000020287	zf-C2H2	PF00096.26	6e-20	3	4
ENSCJAP00000020287	zf-C2H2	PF00096.26	6e-20	4	4
ENSCJAP00000020272	zf-C2H2	PF00096.26	1.8e-15	1	3
ENSCJAP00000020272	zf-C2H2	PF00096.26	1.8e-15	2	3
ENSCJAP00000020272	zf-C2H2	PF00096.26	1.8e-15	3	3
ENSCJAP00000020290	zf-C2H2	PF00096.26	1.3e-12	1	3
ENSCJAP00000020290	zf-C2H2	PF00096.26	1.3e-12	2	3
ENSCJAP00000020290	zf-C2H2	PF00096.26	1.3e-12	3	3
ENSCJAP00000020301	zf-met	PF12874.7	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000021435	PATZ1-203	1737	-	ENSCJAP00000020290	578 (aa)	-	F7DKJ7
ENSCJAT00000021432	PATZ1-201	3115	-	ENSCJAP00000020287	641 (aa)	-	U3CA44
ENSCJAT00000021446	PATZ1-202	2064	-	ENSCJAP00000020301	687 (aa)	-	B0KWS7
ENSCJAT00000021417	PATZ1-204	2986	-	ENSCJAP00000020272	537 (aa)	-	U3BQF6

Gene Model

Click here to download ENSCJAG00000010978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000010978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000010978	PATZ1	75	30.120	ENSCJAG00000001280	ZNF131	67	30.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000010978	PATZ1	100	100.000	ENSG00000100105	PATZ1	100	100.000	Homo_sapiens
ENSCJAG00000010978	PATZ1	99	60.038	ENSAPOG00000018447	patz1	100	59.240	Acanthochromis_polyacanthus
ENSCJAG00000010978	PATZ1	100	99.127	ENSAMEG00000007074	PATZ1	100	99.127	Ailuropoda_melanoleuca
ENSCJAG00000010978	PATZ1	100	60.232	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSCJAG00000010978	PATZ1	100	57.563	ENSAPEG00000013354	patz1	100	57.703	Amphiprion_percula
ENSCJAG00000010978	PATZ1	100	62.549	ENSATEG00000011260	patz1	100	62.353	Anabas_testudineus
ENSCJAG00000010978	PATZ1	85	91.267	ENSAPLG00000003934	PATZ1	99	91.096	Anas_platyrhynchos
ENSCJAG00000010978	PATZ1	100	100.000	ENSANAG00000029603	PATZ1	100	100.000	Aotus_nancymaae
ENSCJAG00000010978	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.147	Astyanax_mexicanus
ENSCJAG00000010978	PATZ1	100	99.220	ENSBTAG00000005478	PATZ1	100	99.220	Bos_taurus
ENSCJAG00000010978	PATZ1	100	99.376	ENSCAFG00000013087	PATZ1	100	99.272	Canis_familiaris
ENSCJAG00000010978	PATZ1	100	98.752	ENSCHIG00000020203	PATZ1	100	98.752	Capra_hircus
ENSCJAG00000010978	PATZ1	100	99.532	ENSTSYG00000033183	PATZ1	100	99.532	Carlito_syrichta
ENSCJAG00000010978	PATZ1	100	100.000	ENSCCAG00000028772	PATZ1	100	100.000	Cebus_capucinus
ENSCJAG00000010978	PATZ1	100	99.709	ENSCATG00000006101	PATZ1	100	99.709	Cercocebus_atys
ENSCJAG00000010978	PATZ1	100	88.986	ENSCPBG00000011277	PATZ1	100	89.130	Chrysemys_picta_bellii
ENSCJAG00000010978	PATZ1	100	99.709	ENSCANG00000024972	PATZ1	100	99.709	Colobus_angolensis_palliatus
ENSCJAG00000010978	PATZ1	100	97.234	ENSCGRG00001004071	Patz1	100	97.234	Cricetulus_griseus_chok1gshd
ENSCJAG00000010978	PATZ1	93	97.978	ENSCGRG00000004814	Patz1	100	97.978	Cricetulus_griseus_crigri
ENSCJAG00000010978	PATZ1	100	55.307	ENSCSEG00000001385	patz1	100	55.278	Cynoglossus_semilaevis
ENSCJAG00000010978	PATZ1	100	58.997	ENSCVAG00000007684	patz1	100	59.292	Cyprinodon_variegatus
ENSCJAG00000010978	PATZ1	97	60.679	ENSDARG00000076584	patz1	98	58.511	Danio_rerio
ENSCJAG00000010978	PATZ1	90	98.546	ENSDNOG00000003183	PATZ1	100	98.546	Dasypus_novemcinctus
ENSCJAG00000010978	PATZ1	100	99.376	ENSDORG00000023834	Patz1	100	99.376	Dipodomys_ordii
ENSCJAG00000010978	PATZ1	100	99.220	ENSECAG00000025030	PATZ1	100	99.220	Equus_caballus
ENSCJAG00000010978	PATZ1	99	61.887	ENSELUG00000002333	patz1	100	58.166	Esox_lucius
ENSCJAG00000010978	PATZ1	100	99.376	ENSFCAG00000030253	PATZ1	100	99.376	Felis_catus
ENSCJAG00000010978	PATZ1	86	91.525	ENSFALG00000007450	PATZ1	99	91.482	Ficedula_albicollis
ENSCJAG00000010978	PATZ1	96	98.051	ENSFDAG00000005614	PATZ1	100	98.051	Fukomys_damarensis
ENSCJAG00000010978	PATZ1	100	57.918	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSCJAG00000010978	PATZ1	98	55.091	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSCJAG00000010978	PATZ1	100	88.345	ENSGALG00000006934	PATZ1	100	88.489	Gallus_gallus
ENSCJAG00000010978	PATZ1	100	59.029	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSCJAG00000010978	PATZ1	85	91.938	ENSGAGG00000003214	PATZ1	100	91.767	Gopherus_agassizii
ENSCJAG00000010978	PATZ1	100	99.854	ENSGGOG00000017171	PATZ1	100	99.854	Gorilla_gorilla
ENSCJAG00000010978	PATZ1	98	62.846	ENSHCOG00000017644	patz1	98	61.372	Hippocampus_comes
ENSCJAG00000010978	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	53.748	Ictalurus_punctatus
ENSCJAG00000010978	PATZ1	100	99.127	ENSSTOG00000020707	PATZ1	100	99.127	Ictidomys_tridecemlineatus
ENSCJAG00000010978	PATZ1	100	96.807	ENSJJAG00000015259	Patz1	100	96.807	Jaculus_jaculus
ENSCJAG00000010978	PATZ1	100	57.670	ENSKMAG00000008157	patz1	100	57.627	Kryptolebias_marmoratus
ENSCJAG00000010978	PATZ1	100	98.544	ENSLAFG00000002317	PATZ1	100	98.544	Loxodonta_africana
ENSCJAG00000010978	PATZ1	100	99.563	ENSMFAG00000040968	PATZ1	100	99.563	Macaca_fascicularis
ENSCJAG00000010978	PATZ1	100	99.563	ENSMNEG00000037588	PATZ1	100	99.563	Macaca_nemestrina
ENSCJAG00000010978	PATZ1	100	99.709	ENSMLEG00000030938	PATZ1	100	99.709	Mandrillus_leucophaeus
ENSCJAG00000010978	PATZ1	100	57.625	ENSMAMG00000023652	patz1	100	57.771	Mastacembelus_armatus
ENSCJAG00000010978	PATZ1	85	87.692	ENSMGAG00000008439	PATZ1	100	87.521	Meleagris_gallopavo
ENSCJAG00000010978	PATZ1	100	98.981	ENSMAUG00000004129	Patz1	100	98.981	Mesocricetus_auratus
ENSCJAG00000010978	PATZ1	100	99.532	ENSMICG00000005430	PATZ1	100	99.532	Microcebus_murinus
ENSCJAG00000010978	PATZ1	100	98.836	ENSMOCG00000014488	Patz1	100	98.836	Microtus_ochrogaster
ENSCJAG00000010978	PATZ1	99	55.469	ENSMMOG00000021679	patz1	100	48.656	Mola_mola
ENSCJAG00000010978	PATZ1	100	56.941	ENSMALG00000021172	patz1	100	56.657	Monopterus_albus
ENSCJAG00000010978	PATZ1	100	98.836	MGP_CAROLIEiJ_G0016007	Patz1	100	98.836	Mus_caroli
ENSCJAG00000010978	PATZ1	100	98.981	ENSMUSG00000020453	Patz1	100	98.981	Mus_musculus
ENSCJAG00000010978	PATZ1	100	98.981	MGP_PahariEiJ_G0016884	Patz1	100	98.981	Mus_pahari
ENSCJAG00000010978	PATZ1	100	98.981	MGP_SPRETEiJ_G0016846	Patz1	100	98.981	Mus_spretus
ENSCJAG00000010978	PATZ1	100	99.064	ENSMLUG00000009942	PATZ1	100	99.064	Myotis_lucifugus
ENSCJAG00000010978	PATZ1	100	99.272	ENSNGAG00000010268	Patz1	100	99.272	Nannospalax_galili
ENSCJAG00000010978	PATZ1	100	60.039	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSCJAG00000010978	PATZ1	68	93.978	ENSMEUG00000016293	PATZ1	99	93.966	Notamacropus_eugenii
ENSCJAG00000010978	PATZ1	100	98.752	ENSODEG00000003589	PATZ1	100	98.752	Octodon_degus
ENSCJAG00000010978	PATZ1	100	58.918	ENSONIG00000004248	patz1	100	58.712	Oreochromis_niloticus
ENSCJAG00000010978	PATZ1	100	93.179	ENSOANG00000014654	PATZ1	100	93.469	Ornithorhynchus_anatinus
ENSCJAG00000010978	PATZ1	100	58.779	ENSORLG00020010937	patz1	100	58.626	Oryzias_latipes_hni
ENSCJAG00000010978	PATZ1	100	58.150	ENSORLG00015007396	patz1	100	58.003	Oryzias_latipes_hsok
ENSCJAG00000010978	PATZ1	100	57.459	ENSOMEG00000006636	patz1	100	57.459	Oryzias_melastigma
ENSCJAG00000010978	PATZ1	100	99.272	ENSOGAG00000027905	PATZ1	100	99.272	Otolemur_garnettii
ENSCJAG00000010978	PATZ1	100	99.854	ENSPPAG00000033227	PATZ1	100	99.854	Pan_paniscus
ENSCJAG00000010978	PATZ1	100	99.376	ENSPPRG00000001573	PATZ1	100	99.376	Panthera_pardus
ENSCJAG00000010978	PATZ1	86	99.325	ENSPTIG00000007937	PATZ1	91	99.325	Panthera_tigris_altaica
ENSCJAG00000010978	PATZ1	100	99.854	ENSPTRG00000014268	PATZ1	100	99.854	Pan_troglodytes
ENSCJAG00000010978	PATZ1	100	99.709	ENSPANG00000006821	PATZ1	100	99.709	Papio_anubis
ENSCJAG00000010978	PATZ1	100	62.313	ENSPKIG00000019584	patz1	100	61.567	Paramormyrops_kingsleyae
ENSCJAG00000010978	PATZ1	60	83.051	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSCJAG00000010978	PATZ1	58	95.960	ENSPSIG00000011562	-	100	96.571	Pelodiscus_sinensis
ENSCJAG00000010978	PATZ1	100	57.022	ENSPMGG00000010196	patz1	100	57.022	Periophthalmus_magnuspinnatus
ENSCJAG00000010978	PATZ1	100	98.908	ENSPEMG00000005321	Patz1	100	98.908	Peromyscus_maniculatus_bairdii
ENSCJAG00000010978	PATZ1	100	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSCJAG00000010978	PATZ1	100	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSCJAG00000010978	PATZ1	100	57.044	ENSPREG00000002440	patz1	100	57.182	Poecilia_reticulata
ENSCJAG00000010978	PATZ1	100	99.563	ENSPPYG00000011732	PATZ1	100	99.563	Pongo_abelii
ENSCJAG00000010978	PATZ1	100	99.376	ENSPCOG00000019729	PATZ1	100	99.376	Propithecus_coquereli
ENSCJAG00000010978	PATZ1	100	99.418	ENSPVAG00000001749	PATZ1	100	99.418	Pteropus_vampyrus
ENSCJAG00000010978	PATZ1	100	59.244	ENSPNYG00000013542	patz1	100	58.906	Pundamilia_nyererei
ENSCJAG00000010978	PATZ1	84	60.454	ENSPNAG00000017222	patz1	99	59.486	Pygocentrus_nattereri
ENSCJAG00000010978	PATZ1	100	99.709	ENSRBIG00000044231	PATZ1	100	99.709	Rhinopithecus_bieti
ENSCJAG00000010978	PATZ1	100	99.709	ENSRROG00000037155	PATZ1	100	99.709	Rhinopithecus_roxellana
ENSCJAG00000010978	PATZ1	100	100.000	ENSSBOG00000003894	PATZ1	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000010978	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSCJAG00000010978	PATZ1	100	87.055	ENSSPUG00000015298	PATZ1	100	86.629	Sphenodon_punctatus
ENSCJAG00000010978	PATZ1	85	98.797	ENSSSCG00000010027	PATZ1	100	98.881	Sus_scrofa
ENSCJAG00000010978	PATZ1	100	58.264	ENSTRUG00000015366	patz1	100	57.676	Takifugu_rubripes
ENSCJAG00000010978	PATZ1	100	99.127	ENSTTRG00000010279	PATZ1	100	99.127	Tursiops_truncatus
ENSCJAG00000010978	PATZ1	100	99.376	ENSUAMG00000015014	PATZ1	100	99.376	Ursus_americanus
ENSCJAG00000010978	PATZ1	100	73.043	ENSXETG00000004190	patz1	100	72.319	Xenopus_tropicalis
ENSCJAG00000010978	PATZ1	100	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus