EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000011202 (Gene tree)
Gene ID: 100412539
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 146967 bases
Position: chrNTIC01000001.1:104507334-104654300
Accession: 100412539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000020657	RTC	PF01137.21	5e-61	1	1
ENSCJAP00000065925	RTC	PF01137.21	3.3e-56	1	1
ENSCJAP00000053775	RTC	PF01137.21	5.7e-44	1	2
ENSCJAP00000053775	RTC	PF01137.21	5.7e-44	2	2
ENSCJAP00000053775	RTC_insert	PF05189.13	6.6e-37	1	1
ENSCJAP00000065925	RTC_insert	PF05189.13	7.5e-37	1	1
ENSCJAP00000020657	RTC_insert	PF05189.13	8.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000076807	RCL1-201	1298	-	ENSCJAP00000065925	346 (aa)	XP_017828901	A0A2R8MWA1
ENSCJAT00000021833	RCL1-203	1122	-	ENSCJAP00000020657	373 (aa)	XP_002742951	U3FH01
ENSCJAT00000078161	RCL1-202	1223	-	ENSCJAP00000053775	321 (aa)	-	A0A2R8M4V6

Gene Model

Click here to download ENSCJAG00000011202's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000011202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000011202	RCL1	100	99.732	ENSG00000120158	RCL1	100	99.732	Homo_sapiens
ENSCJAG00000011202	RCL1	100	78.610	ENSAPOG00000015666	rcl1	100	78.610	Acanthochromis_polyacanthus
ENSCJAG00000011202	RCL1	100	97.319	ENSAMEG00000002631	RCL1	100	97.319	Ailuropoda_melanoleuca
ENSCJAG00000011202	RCL1	99	79.189	ENSACIG00000021195	rcl1	99	79.189	Amphilophus_citrinellus
ENSCJAG00000011202	RCL1	100	78.075	ENSAOCG00000002223	rcl1	100	78.075	Amphiprion_ocellaris
ENSCJAG00000011202	RCL1	100	78.342	ENSAPEG00000006905	rcl1	100	78.342	Amphiprion_percula
ENSCJAG00000011202	RCL1	99	76.486	ENSATEG00000020026	rcl1	99	76.486	Anabas_testudineus
ENSCJAG00000011202	RCL1	88	86.890	ENSAPLG00000006031	RCL1	100	86.890	Anas_platyrhynchos
ENSCJAG00000011202	RCL1	100	84.987	ENSACAG00000003640	RCL1	100	84.987	Anolis_carolinensis
ENSCJAG00000011202	RCL1	100	98.660	ENSANAG00000037372	RCL1	100	98.660	Aotus_nancymaae
ENSCJAG00000011202	RCL1	99	78.649	ENSACLG00000021724	rcl1	99	78.649	Astatotilapia_calliptera
ENSCJAG00000011202	RCL1	98	78.804	ENSAMXG00000033394	rcl1	99	78.804	Astyanax_mexicanus
ENSCJAG00000011202	RCL1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
ENSCJAG00000011202	RCL1	100	96.247	ENSCAFG00000002091	RCL1	100	96.247	Canis_familiaris
ENSCJAG00000011202	RCL1	100	96.247	ENSCAFG00020000638	RCL1	78	96.247	Canis_lupus_dingo
ENSCJAG00000011202	RCL1	100	96.247	ENSCHIG00000012407	RCL1	100	96.247	Capra_hircus
ENSCJAG00000011202	RCL1	88	98.471	ENSTSYG00000009592	RCL1	97	97.238	Carlito_syrichta
ENSCJAG00000011202	RCL1	68	80.925	ENSCAPG00000013575	RCL1	100	80.925	Cavia_aperea
ENSCJAG00000011202	RCL1	100	97.051	ENSCPOG00000015354	RCL1	100	97.051	Cavia_porcellus
ENSCJAG00000011202	RCL1	100	99.464	ENSCCAG00000033505	RCL1	100	99.464	Cebus_capucinus
ENSCJAG00000011202	RCL1	100	98.660	ENSCATG00000034721	RCL1	100	98.660	Cercocebus_atys
ENSCJAG00000011202	RCL1	100	97.319	ENSCLAG00000007445	RCL1	100	97.319	Chinchilla_lanigera
ENSCJAG00000011202	RCL1	100	99.196	ENSCSAG00000008811	RCL1	100	99.196	Chlorocebus_sabaeus
ENSCJAG00000011202	RCL1	93	82.043	ENSCHOG00000007216	RCL1	100	82.043	Choloepus_hoffmanni
ENSCJAG00000011202	RCL1	100	89.276	ENSCPBG00000025481	RCL1	94	89.362	Chrysemys_picta_bellii
ENSCJAG00000011202	RCL1	95	30.178	ENSCING00000007875	-	90	30.473	Ciona_intestinalis
ENSCJAG00000011202	RCL1	98	58.649	ENSCING00000019565	-	98	58.649	Ciona_intestinalis
ENSCJAG00000011202	RCL1	95	30.473	ENSCSAVG00000007269	-	90	30.383	Ciona_savignyi
ENSCJAG00000011202	RCL1	100	99.464	ENSCANG00000027099	RCL1	100	99.464	Colobus_angolensis_palliatus
ENSCJAG00000011202	RCL1	100	95.979	ENSCGRG00001013748	Rcl1	100	95.979	Cricetulus_griseus_chok1gshd
ENSCJAG00000011202	RCL1	88	95.732	ENSCGRG00000005843	Rcl1	99	95.732	Cricetulus_griseus_crigri
ENSCJAG00000011202	RCL1	99	79.189	ENSCSEG00000000712	rcl1	97	79.189	Cynoglossus_semilaevis
ENSCJAG00000011202	RCL1	99	80.270	ENSCVAG00000011536	rcl1	99	80.270	Cyprinodon_variegatus
ENSCJAG00000011202	RCL1	98	76.567	ENSDARG00000038312	rcl1	100	76.567	Danio_rerio
ENSCJAG00000011202	RCL1	71	96.604	ENSDNOG00000019911	RCL1	100	96.604	Dasypus_novemcinctus
ENSCJAG00000011202	RCL1	100	96.515	ENSDORG00000015645	Rcl1	100	96.515	Dipodomys_ordii
ENSCJAG00000011202	RCL1	99	54.233	FBgn0020909	Rtc1	98	54.233	Drosophila_melanogaster
ENSCJAG00000011202	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSCJAG00000011202	RCL1	100	53.867	ENSEBUG00000016621	-	100	53.867	Eptatretus_burgeri
ENSCJAG00000011202	RCL1	100	97.587	ENSEASG00005010653	RCL1	100	97.587	Equus_asinus_asinus
ENSCJAG00000011202	RCL1	100	97.587	ENSECAG00000015973	RCL1	100	97.587	Equus_caballus
ENSCJAG00000011202	RCL1	95	88.073	ENSEEUG00000009801	RCL1	95	88.073	Erinaceus_europaeus
ENSCJAG00000011202	RCL1	100	76.203	ENSELUG00000007353	rcl1	100	76.203	Esox_lucius
ENSCJAG00000011202	RCL1	100	95.442	ENSFCAG00000014557	RCL1	100	95.442	Felis_catus
ENSCJAG00000011202	RCL1	95	82.817	ENSFALG00000010553	RCL1	94	82.817	Ficedula_albicollis
ENSCJAG00000011202	RCL1	88	96.330	ENSFDAG00000004209	RCL1	100	96.330	Fukomys_damarensis
ENSCJAG00000011202	RCL1	99	79.730	ENSFHEG00000011228	rcl1	99	79.730	Fundulus_heteroclitus
ENSCJAG00000011202	RCL1	99	77.297	ENSGMOG00000004677	rcl1	99	77.568	Gadus_morhua
ENSCJAG00000011202	RCL1	99	85.908	ENSGALG00000015024	RCL1	99	85.908	Gallus_gallus
ENSCJAG00000011202	RCL1	99	78.108	ENSGAFG00000007257	rcl1	99	78.108	Gambusia_affinis
ENSCJAG00000011202	RCL1	100	77.273	ENSGACG00000017474	rcl1	100	77.273	Gasterosteus_aculeatus
ENSCJAG00000011202	RCL1	100	89.544	ENSGAGG00000003689	RCL1	100	89.544	Gopherus_agassizii
ENSCJAG00000011202	RCL1	100	99.196	ENSGGOG00000015041	RCL1	100	99.196	Gorilla_gorilla
ENSCJAG00000011202	RCL1	99	78.919	ENSHBUG00000001393	rcl1	99	78.919	Haplochromis_burtoni
ENSCJAG00000011202	RCL1	100	81.233	ENSHGLG00000005368	-	100	80.697	Heterocephalus_glaber_female
ENSCJAG00000011202	RCL1	100	97.319	ENSHGLG00000016452	RCL1	100	97.319	Heterocephalus_glaber_female
ENSCJAG00000011202	RCL1	100	90.349	ENSHGLG00100008718	-	100	90.349	Heterocephalus_glaber_male
ENSCJAG00000011202	RCL1	100	82.306	ENSHGLG00100018010	-	100	81.769	Heterocephalus_glaber_male
ENSCJAG00000011202	RCL1	99	78.108	ENSHCOG00000020170	rcl1	99	78.108	Hippocampus_comes
ENSCJAG00000011202	RCL1	98	80.163	ENSIPUG00000018054	RCL1	99	80.163	Ictalurus_punctatus
ENSCJAG00000011202	RCL1	100	97.319	ENSSTOG00000000023	RCL1	100	97.319	Ictidomys_tridecemlineatus
ENSCJAG00000011202	RCL1	54	72.637	ENSJJAG00000000764	-	95	72.680	Jaculus_jaculus
ENSCJAG00000011202	RCL1	100	84.450	ENSJJAG00000015632	-	100	84.450	Jaculus_jaculus
ENSCJAG00000011202	RCL1	100	95.442	ENSJJAG00000022803	-	100	95.442	Jaculus_jaculus
ENSCJAG00000011202	RCL1	98	77.929	ENSKMAG00000011946	rcl1	99	77.929	Kryptolebias_marmoratus
ENSCJAG00000011202	RCL1	99	75.946	ENSLBEG00000003957	rcl1	99	75.946	Labrus_bergylta
ENSCJAG00000011202	RCL1	92	85.489	ENSLACG00000004594	RCL1	98	85.489	Latimeria_chalumnae
ENSCJAG00000011202	RCL1	100	81.501	ENSLOCG00000010148	rcl1	98	81.501	Lepisosteus_oculatus
ENSCJAG00000011202	RCL1	100	93.566	ENSLAFG00000017495	RCL1	100	93.566	Loxodonta_africana
ENSCJAG00000011202	RCL1	100	99.196	ENSMFAG00000037906	RCL1	100	99.196	Macaca_fascicularis
ENSCJAG00000011202	RCL1	100	99.196	ENSMNEG00000012288	RCL1	100	99.196	Macaca_nemestrina
ENSCJAG00000011202	RCL1	100	99.196	ENSMLEG00000043088	RCL1	100	99.196	Mandrillus_leucophaeus
ENSCJAG00000011202	RCL1	99	78.919	ENSMAMG00000008311	rcl1	99	78.919	Mastacembelus_armatus
ENSCJAG00000011202	RCL1	99	78.649	ENSMZEG00005017292	rcl1	99	78.649	Maylandia_zebra
ENSCJAG00000011202	RCL1	58	83.562	ENSMGAG00000002245	RCL1	97	83.491	Meleagris_gallopavo
ENSCJAG00000011202	RCL1	58	95.814	ENSMAUG00000008922	Rcl1	97	95.673	Mesocricetus_auratus
ENSCJAG00000011202	RCL1	100	96.783	ENSMICG00000015562	RCL1	100	96.783	Microcebus_murinus
ENSCJAG00000011202	RCL1	100	97.051	ENSMOCG00000012145	Rcl1	100	97.051	Microtus_ochrogaster
ENSCJAG00000011202	RCL1	99	76.280	ENSMMOG00000021264	rcl1	99	76.280	Mola_mola
ENSCJAG00000011202	RCL1	95	93.803	ENSMODG00000015377	RCL1	94	93.803	Monodelphis_domestica
ENSCJAG00000011202	RCL1	99	78.108	ENSMALG00000018618	rcl1	99	78.108	Monopterus_albus
ENSCJAG00000011202	RCL1	100	96.783	MGP_CAROLIEiJ_G0022853	Rcl1	100	96.783	Mus_caroli
ENSCJAG00000011202	RCL1	100	96.783	ENSMUSG00000024785	Rcl1	100	96.783	Mus_musculus
ENSCJAG00000011202	RCL1	100	96.247	MGP_PahariEiJ_G0014346	Rcl1	100	96.471	Mus_pahari
ENSCJAG00000011202	RCL1	100	95.979	MGP_SPRETEiJ_G0023771	Rcl1	100	95.979	Mus_spretus
ENSCJAG00000011202	RCL1	100	96.247	ENSMPUG00000004998	RCL1	100	96.247	Mustela_putorius_furo
ENSCJAG00000011202	RCL1	100	96.783	ENSMLUG00000009654	RCL1	100	96.783	Myotis_lucifugus
ENSCJAG00000011202	RCL1	100	97.319	ENSNGAG00000015327	Rcl1	100	97.319	Nannospalax_galili
ENSCJAG00000011202	RCL1	90	77.745	ENSNBRG00000019854	rcl1	96	74.302	Neolamprologus_brichardi
ENSCJAG00000011202	RCL1	100	96.515	ENSNLEG00000008891	RCL1	100	96.515	Nomascus_leucogenys
ENSCJAG00000011202	RCL1	100	86.863	ENSMEUG00000007653	RCL1	100	86.863	Notamacropus_eugenii
ENSCJAG00000011202	RCL1	100	96.515	ENSOPRG00000010965	RCL1	100	96.515	Ochotona_princeps
ENSCJAG00000011202	RCL1	88	79.819	ENSODEG00000004151	RCL1	96	80.793	Octodon_degus
ENSCJAG00000011202	RCL1	99	78.649	ENSONIG00000003871	rcl1	99	78.649	Oreochromis_niloticus
ENSCJAG00000011202	RCL1	67	87.352	ENSOANG00000013193	-	100	87.352	Ornithorhynchus_anatinus
ENSCJAG00000011202	RCL1	100	98.123	ENSOCUG00000008161	RCL1	100	98.123	Oryctolagus_cuniculus
ENSCJAG00000011202	RCL1	100	76.203	ENSORLG00000010443	rcl1	100	76.203	Oryzias_latipes
ENSCJAG00000011202	RCL1	100	76.203	ENSORLG00020012211	rcl1	100	76.203	Oryzias_latipes_hni
ENSCJAG00000011202	RCL1	100	75.936	ENSORLG00015001122	rcl1	100	75.936	Oryzias_latipes_hsok
ENSCJAG00000011202	RCL1	100	77.807	ENSOMEG00000022976	rcl1	88	77.807	Oryzias_melastigma
ENSCJAG00000011202	RCL1	100	95.710	ENSOGAG00000007480	RCL1	100	95.710	Otolemur_garnettii
ENSCJAG00000011202	RCL1	100	96.515	ENSOARG00000013463	RCL1	100	96.515	Ovis_aries
ENSCJAG00000011202	RCL1	100	99.464	ENSPPAG00000037958	RCL1	100	99.464	Pan_paniscus
ENSCJAG00000011202	RCL1	100	94.638	ENSPPRG00000022645	RCL1	100	94.638	Panthera_pardus
ENSCJAG00000011202	RCL1	87	95.399	ENSPTIG00000019031	RCL1	97	94.231	Panthera_tigris_altaica
ENSCJAG00000011202	RCL1	100	99.196	ENSPTRG00000020743	RCL1	100	99.196	Pan_troglodytes
ENSCJAG00000011202	RCL1	100	99.196	ENSPANG00000025151	RCL1	100	99.196	Papio_anubis
ENSCJAG00000011202	RCL1	100	78.075	ENSPKIG00000021022	rcl1	100	78.075	Paramormyrops_kingsleyae
ENSCJAG00000011202	RCL1	88	89.329	ENSPSIG00000012302	RCL1	100	89.329	Pelodiscus_sinensis
ENSCJAG00000011202	RCL1	100	76.471	ENSPMGG00000024007	rcl1	100	76.471	Periophthalmus_magnuspinnatus
ENSCJAG00000011202	RCL1	100	97.051	ENSPEMG00000023275	Rcl1	100	97.051	Peromyscus_maniculatus_bairdii
ENSCJAG00000011202	RCL1	97	30.685	ENSPMAG00000009110	rtca	96	30.685	Petromyzon_marinus
ENSCJAG00000011202	RCL1	100	93.834	ENSPCIG00000000188	RCL1	100	93.834	Phascolarctos_cinereus
ENSCJAG00000011202	RCL1	99	78.919	ENSPFOG00000019682	rcl1	99	78.919	Poecilia_formosa
ENSCJAG00000011202	RCL1	99	78.919	ENSPLAG00000022354	rcl1	99	78.919	Poecilia_latipinna
ENSCJAG00000011202	RCL1	99	78.919	ENSPMEG00000008131	rcl1	99	78.919	Poecilia_mexicana
ENSCJAG00000011202	RCL1	99	78.649	ENSPREG00000008032	rcl1	99	78.649	Poecilia_reticulata
ENSCJAG00000011202	RCL1	100	99.464	ENSPPYG00000019244	RCL1	100	99.464	Pongo_abelii
ENSCJAG00000011202	RCL1	100	85.791	ENSPCAG00000001440	RCL1	100	85.791	Procavia_capensis
ENSCJAG00000011202	RCL1	100	98.123	ENSPCOG00000009611	RCL1	100	98.123	Propithecus_coquereli
ENSCJAG00000011202	RCL1	100	97.051	ENSPVAG00000015752	RCL1	100	97.051	Pteropus_vampyrus
ENSCJAG00000011202	RCL1	99	78.649	ENSPNYG00000012910	rcl1	99	78.649	Pundamilia_nyererei
ENSCJAG00000011202	RCL1	99	78.284	ENSPNAG00000028307	rcl1	92	78.284	Pygocentrus_nattereri
ENSCJAG00000011202	RCL1	100	96.515	ENSRNOG00000015491	Rcl1	100	96.515	Rattus_norvegicus
ENSCJAG00000011202	RCL1	100	99.196	ENSRBIG00000035818	RCL1	100	99.196	Rhinopithecus_bieti
ENSCJAG00000011202	RCL1	100	99.196	ENSRROG00000029781	RCL1	100	99.196	Rhinopithecus_roxellana
ENSCJAG00000011202	RCL1	98	36.757	YOL010W	-	97	35.580	Saccharomyces_cerevisiae
ENSCJAG00000011202	RCL1	100	98.928	ENSSBOG00000026369	RCL1	100	98.928	Saimiri_boliviensis_boliviensis
ENSCJAG00000011202	RCL1	88	92.424	ENSSHAG00000014086	RCL1	100	92.424	Sarcophilus_harrisii
ENSCJAG00000011202	RCL1	100	78.342	ENSSFOG00015023020	rcl1	100	78.342	Scleropages_formosus
ENSCJAG00000011202	RCL1	99	78.919	ENSSMAG00000019751	rcl1	85	78.919	Scophthalmus_maximus
ENSCJAG00000011202	RCL1	100	77.807	ENSSDUG00000006349	rcl1	100	77.807	Seriola_dumerili
ENSCJAG00000011202	RCL1	100	78.075	ENSSLDG00000022076	rcl1	100	78.075	Seriola_lalandi_dorsalis
ENSCJAG00000011202	RCL1	100	95.979	ENSSARG00000009260	RCL1	100	95.979	Sorex_araneus
ENSCJAG00000011202	RCL1	100	87.936	ENSSPUG00000016330	RCL1	100	87.936	Sphenodon_punctatus
ENSCJAG00000011202	RCL1	100	79.947	ENSSPAG00000018038	rcl1	100	79.947	Stegastes_partitus
ENSCJAG00000011202	RCL1	100	97.855	ENSSSCG00000005217	RCL1	83	97.855	Sus_scrofa
ENSCJAG00000011202	RCL1	100	85.067	ENSTGUG00000005138	RCL1	100	85.067	Taeniopygia_guttata
ENSCJAG00000011202	RCL1	99	78.378	ENSTRUG00000010493	rcl1	99	78.378	Takifugu_rubripes
ENSCJAG00000011202	RCL1	99	77.236	ENSTNIG00000013214	rcl1	99	77.236	Tetraodon_nigroviridis
ENSCJAG00000011202	RCL1	100	90.617	ENSTBEG00000016339	RCL1	100	90.617	Tupaia_belangeri
ENSCJAG00000011202	RCL1	100	96.515	ENSTTRG00000016525	RCL1	100	96.515	Tursiops_truncatus
ENSCJAG00000011202	RCL1	100	97.319	ENSUAMG00000005598	RCL1	100	97.319	Ursus_americanus
ENSCJAG00000011202	RCL1	88	96.330	ENSUMAG00000017890	RCL1	97	96.330	Ursus_maritimus
ENSCJAG00000011202	RCL1	88	97.859	ENSVPAG00000009188	RCL1	100	97.859	Vicugna_pacos
ENSCJAG00000011202	RCL1	88	96.341	ENSVVUG00000007304	RCL1	89	96.341	Vulpes_vulpes
ENSCJAG00000011202	RCL1	100	75.134	ENSXETG00000000592	rcl1	100	75.134	Xenopus_tropicalis
ENSCJAG00000011202	RCL1	99	78.919	ENSXCOG00000004922	rcl1	99	78.919	Xiphophorus_couchianus
ENSCJAG00000011202	RCL1	63	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSCJAG00000011202	RCL1	99	78.919	ENSXMAG00000022366	RCL1	99	78.919	Xiphophorus_maculatus