EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000011578 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 6326 bases
Position: chrNTIC01000001.1:3128917-3135242
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000021265	APOBEC_N	PF08210.11	8.3e-45	1	1
ENSCJAP00000021265	APOBEC_C	PF05240.14	6.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000022482	-	744	-	ENSCJAP00000021265	247 (aa)	-	F6R1Y1

Gene Model

Click here to download ENSCJAG00000011578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000011578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000011578	-	72	58.152	ENSCJAG00000012500	-	91	58.152
ENSCJAG00000011578	-	73	64.088	ENSCJAG00000023368	APOBEC3G	93	64.088
ENSCJAG00000011578	-	73	44.565	ENSCJAG00000018856	AICDA	87	44.565
ENSCJAG00000011578	-	74	39.153	ENSCJAG00000012524	APOBEC3H	88	39.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000011578	-	75	63.784	ENSG00000239713	APOBEC3G	92	63.784	Homo_sapiens
ENSCJAG00000011578	-	76	46.154	ENSAMEG00000010815	-	82	46.154	Ailuropoda_melanoleuca
ENSCJAG00000011578	-	68	61.006	ENSANAG00000027961	-	93	61.006	Aotus_nancymaae
ENSCJAG00000011578	-	77	58.730	ENSANAG00000028416	-	94	58.730	Aotus_nancymaae
ENSCJAG00000011578	-	79	86.224	ENSANAG00000020573	-	94	87.766	Aotus_nancymaae
ENSCJAG00000011578	-	75	67.027	ENSANAG00000031271	APOBEC3G	94	67.027	Aotus_nancymaae
ENSCJAG00000011578	-	73	48.901	ENSBTAG00000037800	-	95	48.901	Bos_taurus
ENSCJAG00000011578	-	53	49.242	ENSCAFG00000023589	-	94	49.242	Canis_familiaris
ENSCJAG00000011578	-	77	43.284	ENSCAFG00000015211	-	64	43.284	Canis_familiaris
ENSCJAG00000011578	-	73	44.149	ENSCAFG00020002641	-	78	45.161	Canis_lupus_dingo
ENSCJAG00000011578	-	75	43.850	ENSCAFG00020002661	-	78	44.324	Canis_lupus_dingo
ENSCJAG00000011578	-	74	48.108	ENSCHIG00000012694	-	88	47.802	Capra_hircus
ENSCJAG00000011578	-	79	85.204	ENSCCAG00000030928	-	95	85.204	Cebus_capucinus
ENSCJAG00000011578	-	75	64.324	ENSCCAG00000033147	-	90	64.324	Cebus_capucinus
ENSCJAG00000011578	-	75	54.595	ENSCCAG00000032509	-	96	54.595	Cebus_capucinus
ENSCJAG00000011578	-	74	65.217	ENSCCAG00000032232	-	93	65.217	Cebus_capucinus
ENSCJAG00000011578	-	75	55.215	ENSCSAG00000006376	APOBEC3G	88	55.215	Chlorocebus_sabaeus
ENSCJAG00000011578	-	74	55.357	ENSCANG00000029968	-	73	55.357	Colobus_angolensis_palliatus
ENSCJAG00000011578	-	73	37.705	ENSDNOG00000039749	-	77	38.251	Dasypus_novemcinctus
ENSCJAG00000011578	-	76	53.684	ENSEASG00005018643	-	80	53.684	Equus_asinus_asinus
ENSCJAG00000011578	-	76	53.684	ENSECAG00000022371	APOBEC3Z1B	82	53.684	Equus_caballus
ENSCJAG00000011578	-	73	54.945	ENSECAG00000032756	-	63	54.255	Equus_caballus
ENSCJAG00000011578	-	75	60.773	ENSGGOG00000013750	APOBEC3G	94	60.773	Gorilla_gorilla
ENSCJAG00000011578	-	75	55.376	ENSLAFG00000005275	-	98	55.376	Loxodonta_africana
ENSCJAG00000011578	-	74	53.005	ENSLAFG00000008890	-	87	53.005	Loxodonta_africana
ENSCJAG00000011578	-	77	52.356	ENSLAFG00000020906	-	90	52.356	Loxodonta_africana
ENSCJAG00000011578	-	89	54.148	ENSMFAG00000044711	APOBEC3G	83	61.202	Macaca_fascicularis
ENSCJAG00000011578	-	77	58.462	ENSMMUG00000039346	APOBEC3G	95	58.462	Macaca_mulatta
ENSCJAG00000011578	-	74	61.202	ENSMNEG00000038847	APOBEC3G	91	61.202	Macaca_nemestrina
ENSCJAG00000011578	-	74	59.563	ENSMLEG00000024444	APOBEC3G	90	59.563	Mandrillus_leucophaeus
ENSCJAG00000011578	-	73	55.556	ENSMICG00000047191	-	95	55.556	Microcebus_murinus
ENSCJAG00000011578	-	73	58.011	ENSMICG00000043748	-	89	58.011	Microcebus_murinus
ENSCJAG00000011578	-	73	47.222	ENSMPUG00000013235	-	91	47.222	Mustela_putorius_furo
ENSCJAG00000011578	-	74	43.956	ENSMLUG00000000517	-	99	43.956	Myotis_lucifugus
ENSCJAG00000011578	-	75	44.271	ENSMLUG00000014565	-	100	44.271	Myotis_lucifugus
ENSCJAG00000011578	-	96	50.932	ENSMLUG00000000977	-	90	50.932	Myotis_lucifugus
ENSCJAG00000011578	-	76	46.809	ENSMLUG00000024957	-	85	46.809	Myotis_lucifugus
ENSCJAG00000011578	-	92	47.150	ENSMLUG00000024853	-	100	50.370	Myotis_lucifugus
ENSCJAG00000011578	-	76	48.404	ENSMLUG00000023022	-	84	48.404	Myotis_lucifugus
ENSCJAG00000011578	-	78	56.489	ENSMLUG00000008631	-	97	56.489	Myotis_lucifugus
ENSCJAG00000011578	-	74	53.543	ENSMLUG00000026771	-	74	53.543	Myotis_lucifugus
ENSCJAG00000011578	-	76	42.021	ENSMLUG00000028652	-	81	42.021	Myotis_lucifugus
ENSCJAG00000011578	-	73	65.116	ENSNLEG00000018922	-	92	65.116	Nomascus_leucogenys
ENSCJAG00000011578	-	69	54.386	ENSOPRG00000002326	-	90	54.386	Ochotona_princeps
ENSCJAG00000011578	-	77	50.244	ENSOCUG00000023532	-	77	50.244	Oryctolagus_cuniculus
ENSCJAG00000011578	-	76	60.825	ENSOGAG00000024822	-	94	60.825	Otolemur_garnettii
ENSCJAG00000011578	-	76	66.489	ENSOGAG00000032518	-	97	66.489	Otolemur_garnettii
ENSCJAG00000011578	-	73	46.703	ENSOARG00000016213	APOBEC3Z1	95	46.703	Ovis_aries
ENSCJAG00000011578	-	75	63.243	ENSPPAG00000033277	-	72	64.444	Pan_paniscus
ENSCJAG00000011578	-	78	61.140	ENSPTRG00000014387	APOBEC3G	94	61.140	Pan_troglodytes
ENSCJAG00000011578	-	73	62.778	ENSPPYG00000011833	APOBEC3G	88	62.295	Pongo_abelii
ENSCJAG00000011578	-	76	50.532	ENSPCAG00000015518	-	75	50.532	Procavia_capensis
ENSCJAG00000011578	-	71	55.114	ENSPCOG00000016357	-	86	55.114	Propithecus_coquereli
ENSCJAG00000011578	-	76	52.105	ENSPVAG00000004045	-	93	52.105	Pteropus_vampyrus
ENSCJAG00000011578	-	74	61.749	ENSRBIG00000035436	APOBEC3G	88	61.749	Rhinopithecus_bieti
ENSCJAG00000011578	-	75	69.189	ENSSBOG00000021384	-	93	69.189	Saimiri_boliviensis_boliviensis
ENSCJAG00000011578	-	73	57.459	ENSSBOG00000025673	-	91	57.459	Saimiri_boliviensis_boliviensis
ENSCJAG00000011578	-	79	82.653	ENSSBOG00000029091	-	95	82.653	Saimiri_boliviensis_boliviensis
ENSCJAG00000011578	-	75	64.324	ENSSBOG00000026566	-	95	64.324	Saimiri_boliviensis_boliviensis
ENSCJAG00000011578	-	73	67.403	ENSSBOG00000023468	-	74	67.403	Saimiri_boliviensis_boliviensis
ENSCJAG00000011578	-	75	72.432	ENSSBOG00000018208	-	95	72.432	Saimiri_boliviensis_boliviensis
ENSCJAG00000011578	-	73	51.913	ENSTTRG00000009395	-	90	51.913	Tursiops_truncatus
ENSCJAG00000011578	-	81	42.927	ENSUMAG00000002249	-	93	42.927	Ursus_maritimus
ENSCJAG00000011578	-	74	45.263	ENSUMAG00000014447	-	92	45.263	Ursus_maritimus
ENSCJAG00000011578	-	60	38.065	ENSVVUG00000022583	-	59	40.000	Vulpes_vulpes