EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000011949 (Gene tree)
Gene ID: 100403943
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 25206 bases
Position: chrNTIC01001113.1:11914730-11939935
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000021947	RRM_5	PF13893.6	5.8e-08	1	1
ENSCJAP00000058659	RRM_5	PF13893.6	1.3e-07	1	1
ENSCJAP00000059323	RRM_5	PF13893.6	1.9e-07	1	1
ENSCJAP00000021947	RRM_1	PF00076.22	2e-19	1	1
ENSCJAP00000058659	RRM_1	PF00076.22	4.1e-19	1	1
ENSCJAP00000059323	RRM_1	PF00076.22	4.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000086223	-	660	-	ENSCJAP00000058659	219 (aa)	-	A0A2R8MF61
ENSCJAT00000023199	-	459	-	ENSCJAP00000021947	152 (aa)	-	F6TZA5
ENSCJAT00000084210	-	795	-	ENSCJAP00000059323	264 (aa)	-	A0A2R8MGE7

Gene Model

Click here to download ENSCJAG00000011949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000011949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000011949	-	51	36.250	ENSCJAG00000040528	-	88	36.232
ENSCJAG00000011949	-	53	36.585	ENSCJAG00000017749	ZCRB1	63	32.979
ENSCJAG00000011949	-	55	34.524	ENSCJAG00000039693	NCBP2	61	34.524
ENSCJAG00000011949	-	57	32.184	ENSCJAG00000046587	ELAVL1	57	32.184
ENSCJAG00000011949	-	74	32.143	ENSCJAG00000001294	RBM14	59	32.323
ENSCJAG00000011949	-	70	31.132	ENSCJAG00000013666	RBM4B	59	32.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000011949	-	99	96.711	ENSG00000076053	RBM7	99	97.279	Homo_sapiens
ENSCJAG00000011949	-	93	53.472	ENSAPOG00000012768	rbm7	97	41.353	Acanthochromis_polyacanthus
ENSCJAG00000011949	-	100	90.909	ENSAMEG00000013276	-	100	90.909	Ailuropoda_melanoleuca
ENSCJAG00000011949	-	53	70.370	ENSACIG00000021769	-	88	69.512	Amphilophus_citrinellus
ENSCJAG00000011949	-	93	55.556	ENSAOCG00000004178	rbm7	97	41.667	Amphiprion_ocellaris
ENSCJAG00000011949	-	93	55.556	ENSAPEG00000021981	rbm7	97	41.667	Amphiprion_percula
ENSCJAG00000011949	-	53	72.840	ENSATEG00000000596	-	86	72.840	Anabas_testudineus
ENSCJAG00000011949	-	76	67.227	ENSAPLG00000005180	-	100	57.080	Anas_platyrhynchos
ENSCJAG00000011949	-	100	59.146	ENSACAG00000011589	-	100	49.650	Anolis_carolinensis
ENSCJAG00000011949	-	99	95.395	ENSANAG00000031340	-	100	96.154	Aotus_nancymaae
ENSCJAG00000011949	-	97	97.279	ENSANAG00000031879	-	94	97.279	Aotus_nancymaae
ENSCJAG00000011949	-	93	56.552	ENSACLG00000001203	rbm7	52	55.862	Astatotilapia_calliptera
ENSCJAG00000011949	-	95	64.052	ENSAMXG00000037251	rbm7	99	45.361	Astyanax_mexicanus
ENSCJAG00000011949	-	99	90.789	ENSBTAG00000008219	RBM7	100	87.266	Bos_taurus
ENSCJAG00000011949	-	100	88.258	ENSCAFG00000013514	-	100	87.879	Canis_familiaris
ENSCJAG00000011949	-	100	88.636	ENSCAFG00020002518	-	97	91.946	Canis_lupus_dingo
ENSCJAG00000011949	-	99	89.474	ENSCHIG00000008632	-	100	86.517	Capra_hircus
ENSCJAG00000011949	-	99	89.474	ENSCHIG00000010879	-	100	86.517	Capra_hircus
ENSCJAG00000011949	-	99	90.789	ENSTSYG00000013731	-	100	86.517	Carlito_syrichta
ENSCJAG00000011949	-	88	86.809	ENSCAPG00000012045	-	100	85.532	Cavia_aperea
ENSCJAG00000011949	-	90	85.062	ENSCPOG00000034273	-	100	83.817	Cavia_porcellus
ENSCJAG00000011949	-	100	97.348	ENSCCAG00000036534	-	100	97.348	Cebus_capucinus
ENSCJAG00000011949	-	100	95.506	ENSCATG00000037361	-	100	95.506	Cercocebus_atys
ENSCJAG00000011949	-	99	88.158	ENSCLAG00000014875	-	100	84.387	Chinchilla_lanigera
ENSCJAG00000011949	-	99	97.368	ENSCSAG00000002756	-	100	95.539	Chlorocebus_sabaeus
ENSCJAG00000011949	-	97	93.243	ENSCHOG00000012747	-	100	93.243	Choloepus_hoffmanni
ENSCJAG00000011949	-	98	72.785	ENSCPBG00000009366	-	90	68.862	Chrysemys_picta_bellii
ENSCJAG00000011949	-	100	95.880	ENSCANG00000031398	-	100	95.880	Colobus_angolensis_palliatus
ENSCJAG00000011949	-	98	88.667	ENSCGRG00001019236	Rbm7	100	84.270	Cricetulus_griseus_chok1gshd
ENSCJAG00000011949	-	98	88.667	ENSCGRG00000005045	Rbm7	100	84.270	Cricetulus_griseus_crigri
ENSCJAG00000011949	-	63	65.306	ENSCSEG00000002160	rbm7	62	46.061	Cynoglossus_semilaevis
ENSCJAG00000011949	-	95	53.691	ENSCVAG00000023415	rbm7	97	38.163	Cyprinodon_variegatus
ENSCJAG00000011949	-	94	60.135	ENSDARG00000020841	rbm7	99	42.537	Danio_rerio
ENSCJAG00000011949	-	80	42.975	ENSDARG00000090202	rbm11	71	46.667	Danio_rerio
ENSCJAG00000011949	-	99	94.079	ENSDNOG00000018423	-	100	90.637	Dasypus_novemcinctus
ENSCJAG00000011949	-	65	60.606	ENSDORG00000000801	Rbm11	69	60.606	Dipodomys_ordii
ENSCJAG00000011949	-	99	90.789	ENSDORG00000029149	Rbm7	100	82.397	Dipodomys_ordii
ENSCJAG00000011949	-	97	89.796	ENSETEG00000015869	-	100	79.478	Echinops_telfairi
ENSCJAG00000011949	-	61	68.478	ENSEBUG00000009746	rbm7	61	68.478	Eptatretus_burgeri
ENSCJAG00000011949	-	99	93.421	ENSEASG00005006676	-	100	85.768	Equus_asinus_asinus
ENSCJAG00000011949	-	99	90.132	ENSECAG00000004636	-	100	85.768	Equus_caballus
ENSCJAG00000011949	-	99	89.474	ENSEEUG00000015854	-	98	74.809	Erinaceus_europaeus
ENSCJAG00000011949	-	95	59.060	ENSELUG00000017868	rbm7	99	47.940	Esox_lucius
ENSCJAG00000011949	-	99	89.474	ENSFCAG00000040484	-	100	87.266	Felis_catus
ENSCJAG00000011949	-	93	64.384	ENSFALG00000010039	-	88	51.986	Ficedula_albicollis
ENSCJAG00000011949	-	100	85.019	ENSFDAG00000010616	-	100	84.270	Fukomys_damarensis
ENSCJAG00000011949	-	53	70.370	ENSFHEG00000000845	-	91	69.512	Fundulus_heteroclitus
ENSCJAG00000011949	-	93	47.222	ENSGMOG00000013362	rbm7	94	38.951	Gadus_morhua
ENSCJAG00000011949	-	96	68.456	ENSGALG00000007017	RBM7	100	54.704	Gallus_gallus
ENSCJAG00000011949	-	79	60.833	ENSGALG00000044391	RBM11	57	54.305	Gallus_gallus
ENSCJAG00000011949	-	95	54.362	ENSGAFG00000000870	rbm7	54	53.947	Gambusia_affinis
ENSCJAG00000011949	-	95	55.034	ENSGACG00000006628	rbm7	57	54.839	Gasterosteus_aculeatus
ENSCJAG00000011949	-	98	72.785	ENSGAGG00000021127	-	100	59.136	Gopherus_agassizii
ENSCJAG00000011949	-	97	96.599	ENSGGOG00000009941	-	100	91.364	Gorilla_gorilla
ENSCJAG00000011949	-	93	55.172	ENSHBUG00000004319	rbm7	52	54.483	Haplochromis_burtoni
ENSCJAG00000011949	-	98	82.667	ENSHGLG00000014428	-	98	80.000	Heterocephalus_glaber_female
ENSCJAG00000011949	-	100	77.323	ENSHGLG00000002486	-	95	76.952	Heterocephalus_glaber_female
ENSCJAG00000011949	-	55	91.566	ENSHGLG00000003564	-	73	91.566	Heterocephalus_glaber_female
ENSCJAG00000011949	-	99	89.474	ENSHGLG00000018700	RBM7	100	86.142	Heterocephalus_glaber_female
ENSCJAG00000011949	-	92	87.234	ENSHGLG00000016655	-	98	80.859	Heterocephalus_glaber_female
ENSCJAG00000011949	-	97	69.388	ENSHGLG00000013918	-	98	69.388	Heterocephalus_glaber_female
ENSCJAG00000011949	-	97	69.388	ENSHGLG00100015249	-	98	69.388	Heterocephalus_glaber_male
ENSCJAG00000011949	-	100	77.323	ENSHGLG00100011792	-	95	76.952	Heterocephalus_glaber_male
ENSCJAG00000011949	-	100	88.764	ENSHGLG00100005358	-	100	88.015	Heterocephalus_glaber_male
ENSCJAG00000011949	-	82	80.315	ENSHGLG00100005739	-	94	61.364	Heterocephalus_glaber_male
ENSCJAG00000011949	-	98	82.667	ENSHGLG00100011703	-	98	80.000	Heterocephalus_glaber_male
ENSCJAG00000011949	-	65	64.706	ENSHGLG00100008973	-	89	63.462	Heterocephalus_glaber_male
ENSCJAG00000011949	-	92	87.234	ENSHGLG00100009317	-	98	80.859	Heterocephalus_glaber_male
ENSCJAG00000011949	-	55	91.566	ENSHGLG00100001021	-	73	91.566	Heterocephalus_glaber_male
ENSCJAG00000011949	-	53	70.370	ENSHCOG00000010866	-	85	70.370	Hippocampus_comes
ENSCJAG00000011949	-	57	52.874	ENSIPUG00000018209	rbm11	94	52.273	Ictalurus_punctatus
ENSCJAG00000011949	-	94	60.811	ENSIPUG00000009397	rbm7	99	47.940	Ictalurus_punctatus
ENSCJAG00000011949	-	100	84.270	ENSSTOG00000012459	-	100	83.521	Ictidomys_tridecemlineatus
ENSCJAG00000011949	-	93	83.099	ENSSTOG00000031973	-	100	69.685	Ictidomys_tridecemlineatus
ENSCJAG00000011949	-	99	79.323	ENSJJAG00000016540	-	100	78.195	Jaculus_jaculus
ENSCJAG00000011949	-	99	88.816	ENSJJAG00000011823	-	100	86.517	Jaculus_jaculus
ENSCJAG00000011949	-	93	52.414	ENSLBEG00000024902	rbm7	53	53.103	Labrus_bergylta
ENSCJAG00000011949	-	98	66.225	ENSLACG00000018620	-	99	57.407	Latimeria_chalumnae
ENSCJAG00000011949	-	97	60.265	ENSLOCG00000002408	rbm7	99	48.746	Lepisosteus_oculatus
ENSCJAG00000011949	-	97	87.162	ENSLAFG00000012444	-	100	82.090	Loxodonta_africana
ENSCJAG00000011949	-	99	97.368	ENSMFAG00000000965	-	100	95.880	Macaca_fascicularis
ENSCJAG00000011949	-	99	96.711	ENSMMUG00000012270	RBM7	100	95.506	Macaca_mulatta
ENSCJAG00000011949	-	99	96.711	ENSMNEG00000005397	-	100	95.506	Macaca_nemestrina
ENSCJAG00000011949	-	100	95.506	ENSMLEG00000041953	-	100	95.506	Mandrillus_leucophaeus
ENSCJAG00000011949	-	94	54.422	ENSMAMG00000014145	rbm7	99	41.869	Mastacembelus_armatus
ENSCJAG00000011949	-	93	55.862	ENSMZEG00005013295	rbm7	52	55.172	Maylandia_zebra
ENSCJAG00000011949	-	96	69.595	ENSMGAG00000003004	-	100	57.042	Meleagris_gallopavo
ENSCJAG00000011949	-	95	88.194	ENSMAUG00000017938	-	99	84.516	Mesocricetus_auratus
ENSCJAG00000011949	-	97	86.395	ENSMAUG00000001942	-	100	81.648	Mesocricetus_auratus
ENSCJAG00000011949	-	99	90.132	ENSMICG00000042981	-	100	86.131	Microcebus_murinus
ENSCJAG00000011949	-	97	88.435	ENSMOCG00000009674	Rbm7	100	81.648	Microtus_ochrogaster
ENSCJAG00000011949	-	84	49.265	ENSMMOG00000004967	rbm7	68	61.972	Mola_mola
ENSCJAG00000011949	-	99	78.750	ENSMODG00000013918	-	100	74.007	Monodelphis_domestica
ENSCJAG00000011949	-	93	49.655	ENSMALG00000010901	rbm7	82	38.430	Monopterus_albus
ENSCJAG00000011949	-	98	88.000	MGP_CAROLIEiJ_G0032167	Rbm7	100	82.836	Mus_caroli
ENSCJAG00000011949	-	98	87.333	ENSMUSG00000042396	Rbm7	100	83.521	Mus_musculus
ENSCJAG00000011949	-	98	88.000	MGP_PahariEiJ_G0015035	Rbm7	100	83.895	Mus_pahari
ENSCJAG00000011949	-	98	87.333	MGP_SPRETEiJ_G0033306	Rbm7	100	81.273	Mus_spretus
ENSCJAG00000011949	-	100	90.152	ENSMPUG00000003941	-	100	90.530	Mustela_putorius_furo
ENSCJAG00000011949	-	97	87.919	ENSMLUG00000023234	-	99	82.129	Myotis_lucifugus
ENSCJAG00000011949	-	97	90.476	ENSNGAG00000006244	-	100	85.393	Nannospalax_galili
ENSCJAG00000011949	-	93	55.862	ENSNBRG00000017104	rbm7	52	55.172	Neolamprologus_brichardi
ENSCJAG00000011949	-	99	97.368	ENSNLEG00000029494	-	100	95.880	Nomascus_leucogenys
ENSCJAG00000011949	-	100	65.056	ENSMEUG00000006187	-	100	64.312	Notamacropus_eugenii
ENSCJAG00000011949	-	99	88.158	ENSOPRG00000011060	-	100	79.026	Ochotona_princeps
ENSCJAG00000011949	-	97	91.837	ENSODEG00000010164	-	99	91.837	Octodon_degus
ENSCJAG00000011949	-	99	77.632	ENSODEG00000016844	-	100	63.636	Octodon_degus
ENSCJAG00000011949	-	99	65.132	ENSODEG00000000186	-	96	63.320	Octodon_degus
ENSCJAG00000011949	-	93	55.102	ENSONIG00000005369	rbm7	62	49.438	Oreochromis_niloticus
ENSCJAG00000011949	-	97	75.163	ENSOANG00000001755	-	93	71.273	Ornithorhynchus_anatinus
ENSCJAG00000011949	-	99	93.421	ENSOCUG00000003342	-	100	89.139	Oryctolagus_cuniculus
ENSCJAG00000011949	-	93	55.479	ENSORLG00000028880	rbm7	70	47.120	Oryzias_latipes
ENSCJAG00000011949	-	93	54.795	ENSORLG00020010841	rbm7	70	46.597	Oryzias_latipes_hni
ENSCJAG00000011949	-	93	54.483	ENSORLG00015000536	rbm7	70	45.833	Oryzias_latipes_hsok
ENSCJAG00000011949	-	76	46.667	ENSOMEG00000000117	rbm7	58	41.333	Oryzias_melastigma
ENSCJAG00000011949	-	65	60.606	ENSOGAG00000005760	RBM11	50	60.606	Otolemur_garnettii
ENSCJAG00000011949	-	99	94.079	ENSOGAG00000016857	-	100	90.977	Otolemur_garnettii
ENSCJAG00000011949	-	99	90.789	ENSOARG00000000924	-	99	87.266	Ovis_aries
ENSCJAG00000011949	-	99	96.711	ENSPPAG00000027572	-	100	93.258	Pan_paniscus
ENSCJAG00000011949	-	99	89.474	ENSPPRG00000004372	-	100	86.517	Panthera_pardus
ENSCJAG00000011949	-	99	89.474	ENSPTIG00000013512	-	100	86.517	Panthera_tigris_altaica
ENSCJAG00000011949	-	99	96.711	ENSPTRG00000004305	RBM7	100	93.258	Pan_troglodytes
ENSCJAG00000011949	-	96	87.891	ENSPTRG00000049329	-	98	86.328	Pan_troglodytes
ENSCJAG00000011949	-	99	96.711	ENSPANG00000009431	-	100	95.131	Papio_anubis
ENSCJAG00000011949	-	86	41.722	ENSPKIG00000019177	-	67	42.282	Paramormyrops_kingsleyae
ENSCJAG00000011949	-	94	63.758	ENSPKIG00000016648	rbm7	99	49.635	Paramormyrops_kingsleyae
ENSCJAG00000011949	-	93	51.724	ENSPMGG00000001523	rbm7	90	66.250	Periophthalmus_magnuspinnatus
ENSCJAG00000011949	-	97	85.714	ENSPEMG00000011553	-	100	75.094	Peromyscus_maniculatus_bairdii
ENSCJAG00000011949	-	57	65.116	ENSPMAG00000001518	-	97	65.116	Petromyzon_marinus
ENSCJAG00000011949	-	94	80.132	ENSPCIG00000011225	-	84	75.725	Phascolarctos_cinereus
ENSCJAG00000011949	-	95	53.691	ENSPFOG00000002193	rbm7	52	54.861	Poecilia_formosa
ENSCJAG00000011949	-	95	53.020	ENSPLAG00000010517	rbm7	52	54.167	Poecilia_latipinna
ENSCJAG00000011949	-	95	53.691	ENSPMEG00000003603	rbm7	55	51.613	Poecilia_mexicana
ENSCJAG00000011949	-	95	54.362	ENSPREG00000015610	rbm7	52	55.556	Poecilia_reticulata
ENSCJAG00000011949	-	99	96.711	ENSPPYG00000003894	-	100	92.509	Pongo_abelii
ENSCJAG00000011949	-	65	62.626	ENSPCAG00000008368	-	69	62.626	Procavia_capensis
ENSCJAG00000011949	-	88	70.886	ENSPCAG00000003270	-	100	68.776	Procavia_capensis
ENSCJAG00000011949	-	55	96.386	ENSPCOG00000022719	-	100	96.386	Propithecus_coquereli
ENSCJAG00000011949	-	99	94.737	ENSPVAG00000005294	-	100	88.764	Pteropus_vampyrus
ENSCJAG00000011949	-	93	55.172	ENSPNYG00000012084	rbm7	52	54.483	Pundamilia_nyererei
ENSCJAG00000011949	-	50	56.579	ENSPNAG00000009243	rbm11	90	53.659	Pygocentrus_nattereri
ENSCJAG00000011949	-	94	57.692	ENSPNAG00000012813	rbm7	99	42.105	Pygocentrus_nattereri
ENSCJAG00000011949	-	99	97.368	ENSRBIG00000044762	-	100	96.255	Rhinopithecus_bieti
ENSCJAG00000011949	-	99	97.368	ENSRROG00000032280	-	100	96.255	Rhinopithecus_roxellana
ENSCJAG00000011949	-	100	95.833	ENSSBOG00000027830	-	100	95.833	Saimiri_boliviensis_boliviensis
ENSCJAG00000011949	-	99	81.132	ENSSHAG00000008426	-	100	76.087	Sarcophilus_harrisii
ENSCJAG00000011949	-	95	60.127	ENSSFOG00015008458	rbm7	99	47.584	Scleropages_formosus
ENSCJAG00000011949	-	64	55.670	ENSSFOG00015013138	rbm11	76	55.670	Scleropages_formosus
ENSCJAG00000011949	-	95	52.667	ENSSMAG00000003040	rbm7	54	52.414	Scophthalmus_maximus
ENSCJAG00000011949	-	95	54.054	ENSSDUG00000005361	rbm7	61	49.704	Seriola_dumerili
ENSCJAG00000011949	-	95	54.054	ENSSLDG00000003221	rbm7	61	49.704	Seriola_lalandi_dorsalis
ENSCJAG00000011949	-	88	54.015	ENSSPUG00000006032	-	99	53.285	Sphenodon_punctatus
ENSCJAG00000011949	-	95	56.757	ENSSPAG00000019320	rbm7	68	73.256	Stegastes_partitus
ENSCJAG00000011949	-	100	87.640	ENSSSCG00000027905	-	100	85.768	Sus_scrofa
ENSCJAG00000011949	-	97	63.514	ENSTGUG00000000117	-	100	50.000	Taeniopygia_guttata
ENSCJAG00000011949	-	92	52.778	ENSTRUG00000020355	rbm7	57	50.641	Takifugu_rubripes
ENSCJAG00000011949	-	100	77.154	ENSTBEG00000008650	-	100	75.655	Tupaia_belangeri
ENSCJAG00000011949	-	99	91.447	ENSTTRG00000001515	-	100	87.266	Tursiops_truncatus
ENSCJAG00000011949	-	100	91.288	ENSUAMG00000019095	-	100	91.667	Ursus_americanus
ENSCJAG00000011949	-	100	91.288	ENSUMAG00000003774	-	100	91.667	Ursus_maritimus
ENSCJAG00000011949	-	99	92.105	ENSVPAG00000006300	-	100	89.139	Vicugna_pacos
ENSCJAG00000011949	-	95	68.667	ENSXETG00000012654	rbm7	99	54.167	Xenopus_tropicalis
ENSCJAG00000011949	-	53	70.000	ENSXCOG00000001191	-	88	70.000	Xiphophorus_couchianus
ENSCJAG00000011949	-	95	51.678	ENSXMAG00000000970	rbm7	91	39.394	Xiphophorus_maculatus