EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000012172 (Gene tree)
Gene ID: 100412467
Gene Symbol: SYMPK
Alias: SPK|SYM
Full Name: symplekin
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 60116 bases
Position: chrNTIC01011113.1:43488807-43548922
Accession: 22935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000022472	Symplekin_C	PF12295.8	6.5e-74	1	1
ENSCJAP00000022442	Symplekin_C	PF12295.8	6.6e-74	1	1
ENSCJAP00000066301	Symplekin_C	PF12295.8	1.8e-71	1	1
ENSCJAP00000066726	Symplekin_C	PF12295.8	3.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000023797	SYMPK-201	2157	-	ENSCJAP00000022497	718 (aa)	-	F7IML3
ENSCJAT00000078478	SYMPK-203	3168	-	ENSCJAP00000066301	1055 (aa)	-	A0A2R8PLB5
ENSCJAT00000023769	SYMPK-202	4445	-	ENSCJAP00000022472	1229 (aa)	-	F7IQ05
ENSCJAT00000023731	SYMPK-204	3753	-	ENSCJAP00000022442	1250 (aa)	-	F7HNG7
ENSCJAT00000076064	SYMPK-205	2331	-	ENSCJAP00000066726	776 (aa)	-	A0A2R8PM14

Gene Model

Click here to download ENSCJAG00000012172's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03015	mRNA surveillance pathway	KEGG
cjc04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000012172	SYMPK	99	97.460	ENSG00000125755	SYMPK	100	99.296	Homo_sapiens
ENSCJAG00000012172	SYMPK	97	74.280	ENSAPOG00000015934	sympk	98	73.308	Acanthochromis_polyacanthus
ENSCJAG00000012172	SYMPK	99	96.613	ENSAMEG00000000680	SYMPK	100	94.256	Ailuropoda_melanoleuca
ENSCJAG00000012172	SYMPK	96	74.131	ENSACIG00000006357	sympk	92	74.703	Amphilophus_citrinellus
ENSCJAG00000012172	SYMPK	97	73.684	ENSAOCG00000024124	sympk	92	75.349	Amphiprion_ocellaris
ENSCJAG00000012172	SYMPK	97	73.684	ENSAPEG00000003465	sympk	90	74.211	Amphiprion_percula
ENSCJAG00000012172	SYMPK	97	73.739	ENSATEG00000008472	sympk	91	74.350	Anabas_testudineus
ENSCJAG00000012172	SYMPK	93	85.517	ENSACAG00000004126	SYMPK	99	78.041	Anolis_carolinensis
ENSCJAG00000012172	SYMPK	99	97.742	ENSANAG00000021087	SYMPK	100	100.000	Aotus_nancymaae
ENSCJAG00000012172	SYMPK	97	73.930	ENSACLG00000001813	sympk	91	74.506	Astatotilapia_calliptera
ENSCJAG00000012172	SYMPK	99	72.753	ENSAMXG00000013677	sympk	90	74.552	Astyanax_mexicanus
ENSCJAG00000012172	SYMPK	99	96.519	ENSBTAG00000012101	SYMPK	100	93.947	Bos_taurus
ENSCJAG00000012172	SYMPK	85	31.948	WBGene00017797	symk-1	58	31.948	Caenorhabditis_elegans
ENSCJAG00000012172	SYMPK	99	97.272	ENSCAFG00000004376	SYMPK	95	98.967	Canis_familiaris
ENSCJAG00000012172	SYMPK	99	97.272	ENSCAFG00020001815	SYMPK	95	98.967	Canis_lupus_dingo
ENSCJAG00000012172	SYMPK	99	96.707	ENSCHIG00000026784	SYMPK	100	94.104	Capra_hircus
ENSCJAG00000012172	SYMPK	99	96.707	ENSTSYG00000006268	SYMPK	100	95.664	Carlito_syrichta
ENSCJAG00000012172	SYMPK	99	93.597	ENSCAPG00000005112	SYMPK	96	95.403	Cavia_aperea
ENSCJAG00000012172	SYMPK	99	96.237	ENSCPOG00000010434	SYMPK	100	93.670	Cavia_porcellus
ENSCJAG00000012172	SYMPK	99	97.742	ENSCCAG00000036309	SYMPK	100	100.000	Cebus_capucinus
ENSCJAG00000012172	SYMPK	99	97.460	ENSCATG00000045107	SYMPK	100	99.200	Cercocebus_atys
ENSCJAG00000012172	SYMPK	99	96.519	ENSCLAG00000001206	SYMPK	100	93.020	Chinchilla_lanigera
ENSCJAG00000012172	SYMPK	99	97.460	ENSCSAG00000003115	SYMPK	100	95.447	Chlorocebus_sabaeus
ENSCJAG00000012172	SYMPK	80	100.000	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSCJAG00000012172	SYMPK	99	86.368	ENSCPBG00000007170	SYMPK	93	87.020	Chrysemys_picta_bellii
ENSCJAG00000012172	SYMPK	93	48.534	ENSCING00000021232	-	96	48.870	Ciona_intestinalis
ENSCJAG00000012172	SYMPK	93	47.159	ENSCSAVG00000005154	-	100	47.977	Ciona_savignyi
ENSCJAG00000012172	SYMPK	100	94.382	ENSCANG00000040907	SYMPK	100	99.200	Colobus_angolensis_palliatus
ENSCJAG00000012172	SYMPK	90	97.329	ENSCGRG00001010086	Sympk	100	88.686	Cricetulus_griseus_chok1gshd
ENSCJAG00000012172	SYMPK	97	74.042	ENSCSEG00000016802	sympk	89	75.207	Cynoglossus_semilaevis
ENSCJAG00000012172	SYMPK	98	72.667	ENSDARG00000059553	sympk	88	74.182	Danio_rerio
ENSCJAG00000012172	SYMPK	99	95.390	ENSDNOG00000016149	SYMPK	98	92.693	Dasypus_novemcinctus
ENSCJAG00000012172	SYMPK	98	36.754	FBgn0037371	Sym	95	36.640	Drosophila_melanogaster
ENSCJAG00000012172	SYMPK	50	95.541	ENSETEG00000015995	-	54	95.541	Echinops_telfairi
ENSCJAG00000012172	SYMPK	90	59.861	ENSEBUG00000000387	sympk	89	62.428	Eptatretus_burgeri
ENSCJAG00000012172	SYMPK	99	97.178	ENSEASG00005014227	SYMPK	100	94.501	Equus_asinus_asinus
ENSCJAG00000012172	SYMPK	99	97.178	ENSECAG00000008163	SYMPK	100	94.501	Equus_caballus
ENSCJAG00000012172	SYMPK	79	93.103	ENSEEUG00000000270	-	81	94.667	Erinaceus_europaeus
ENSCJAG00000012172	SYMPK	99	74.109	ENSELUG00000000850	sympk	88	75.470	Esox_lucius
ENSCJAG00000012172	SYMPK	100	99.016	ENSFCAG00000007337	SYMPK	100	94.580	Felis_catus
ENSCJAG00000012172	SYMPK	99	96.049	ENSFDAG00000011272	SYMPK	100	92.779	Fukomys_damarensis
ENSCJAG00000012172	SYMPK	97	74.398	ENSFHEG00000010274	sympk	90	74.932	Fundulus_heteroclitus
ENSCJAG00000012172	SYMPK	96	72.309	ENSGMOG00000002357	sympk	99	73.596	Gadus_morhua
ENSCJAG00000012172	SYMPK	96	74.493	ENSGAFG00000010976	sympk	89	75.666	Gambusia_affinis
ENSCJAG00000012172	SYMPK	98	72.684	ENSGACG00000002735	sympk	98	74.771	Gasterosteus_aculeatus
ENSCJAG00000012172	SYMPK	71	83.604	ENSGAGG00000012538	-	88	85.191	Gopherus_agassizii
ENSCJAG00000012172	SYMPK	100	97.191	ENSGGOG00000003410	SYMPK	100	99.200	Gorilla_gorilla
ENSCJAG00000012172	SYMPK	97	74.025	ENSHBUG00000023564	sympk	91	74.596	Haplochromis_burtoni
ENSCJAG00000012172	SYMPK	99	90.781	ENSHGLG00000005228	SYMPK	100	88.845	Heterocephalus_glaber_female
ENSCJAG00000012172	SYMPK	99	96.143	ENSHGLG00100018571	SYMPK	100	90.382	Heterocephalus_glaber_male
ENSCJAG00000012172	SYMPK	96	69.485	ENSHCOG00000017400	sympk	90	70.702	Hippocampus_comes
ENSCJAG00000012172	SYMPK	99	72.983	ENSIPUG00000024020	SYMPK	90	74.373	Ictalurus_punctatus
ENSCJAG00000012172	SYMPK	99	96.613	ENSSTOG00000001534	SYMPK	95	98.538	Ictidomys_tridecemlineatus
ENSCJAG00000012172	SYMPK	99	96.415	ENSJJAG00000006633	Sympk	95	97.764	Jaculus_jaculus
ENSCJAG00000012172	SYMPK	97	74.067	ENSKMAG00000016292	sympk	90	75.023	Kryptolebias_marmoratus
ENSCJAG00000012172	SYMPK	97	73.785	ENSLBEG00000027913	sympk	96	71.204	Labrus_bergylta
ENSCJAG00000012172	SYMPK	99	72.176	ENSLACG00000016497	SYMPK	96	73.202	Latimeria_chalumnae
ENSCJAG00000012172	SYMPK	99	97.170	ENSLAFG00000008726	SYMPK	100	93.485	Loxodonta_africana
ENSCJAG00000012172	SYMPK	99	97.460	ENSMMUG00000015428	SYMPK	100	99.200	Macaca_mulatta
ENSCJAG00000012172	SYMPK	99	97.366	ENSMNEG00000019439	SYMPK	100	99.200	Macaca_nemestrina
ENSCJAG00000012172	SYMPK	99	97.460	ENSMLEG00000040508	SYMPK	100	99.200	Mandrillus_leucophaeus
ENSCJAG00000012172	SYMPK	97	73.871	ENSMAMG00000010486	sympk	89	75.023	Mastacembelus_armatus
ENSCJAG00000012172	SYMPK	97	73.930	ENSMZEG00005014146	sympk	91	74.506	Maylandia_zebra
ENSCJAG00000012172	SYMPK	99	95.579	ENSMAUG00000015657	Sympk	100	90.603	Mesocricetus_auratus
ENSCJAG00000012172	SYMPK	99	96.896	ENSMICG00000001871	SYMPK	100	94.431	Microcebus_murinus
ENSCJAG00000012172	SYMPK	99	95.660	ENSMOCG00000008388	Sympk	100	89.875	Microtus_ochrogaster
ENSCJAG00000012172	SYMPK	97	71.783	ENSMMOG00000019227	sympk	94	73.164	Mola_mola
ENSCJAG00000012172	SYMPK	99	91.235	ENSMODG00000021534	SYMPK	91	91.997	Monodelphis_domestica
ENSCJAG00000012172	SYMPK	95	72.133	ENSMALG00000008347	sympk	96	69.894	Monopterus_albus
ENSCJAG00000012172	SYMPK	99	95.861	MGP_CAROLIEiJ_G0029267	Sympk	95	97.009	Mus_caroli
ENSCJAG00000012172	SYMPK	99	95.673	ENSMUSG00000023118	Sympk	95	96.180	Mus_musculus
ENSCJAG00000012172	SYMPK	99	95.767	MGP_PahariEiJ_G0021127	Sympk	95	97.170	Mus_pahari
ENSCJAG00000012172	SYMPK	99	95.767	MGP_SPRETEiJ_G0030351	-	96	96.593	Mus_spretus
ENSCJAG00000012172	SYMPK	99	94.638	ENSMPUG00000005505	SYMPK	100	91.628	Mustela_putorius_furo
ENSCJAG00000012172	SYMPK	93	93.914	ENSMLUG00000001359	SYMPK	100	90.448	Myotis_lucifugus
ENSCJAG00000012172	SYMPK	99	96.331	ENSNGAG00000000820	Sympk	95	97.688	Nannospalax_galili
ENSCJAG00000012172	SYMPK	93	76.016	ENSNBRG00000018101	sympk	92	75.187	Neolamprologus_brichardi
ENSCJAG00000012172	SYMPK	93	88.658	ENSNLEG00000002369	SYMPK	100	81.641	Nomascus_leucogenys
ENSCJAG00000012172	SYMPK	78	96.373	ENSMEUG00000003866	SYMPK	81	91.228	Notamacropus_eugenii
ENSCJAG00000012172	SYMPK	99	94.167	ENSOPRG00000009967	SYMPK	100	90.618	Ochotona_princeps
ENSCJAG00000012172	SYMPK	99	96.237	ENSODEG00000007519	SYMPK	95	98.196	Octodon_degus
ENSCJAG00000012172	SYMPK	97	73.639	ENSONIG00000016802	sympk	95	74.795	Oreochromis_niloticus
ENSCJAG00000012172	SYMPK	95	96.757	ENSOCUG00000005511	SYMPK	90	97.824	Oryctolagus_cuniculus
ENSCJAG00000012172	SYMPK	97	74.258	ENSORLG00000015338	sympk	96	74.340	Oryzias_latipes
ENSCJAG00000012172	SYMPK	97	74.163	ENSORLG00020004402	sympk	91	74.977	Oryzias_latipes_hni
ENSCJAG00000012172	SYMPK	97	74.258	ENSORLG00015005712	sympk	91	75.068	Oryzias_latipes_hsok
ENSCJAG00000012172	SYMPK	96	73.913	ENSOMEG00000022561	sympk	91	74.590	Oryzias_melastigma
ENSCJAG00000012172	SYMPK	99	97.084	ENSOGAG00000013483	SYMPK	100	94.349	Otolemur_garnettii
ENSCJAG00000012172	SYMPK	99	93.732	ENSOARG00000010349	SYMPK	100	90.845	Ovis_aries
ENSCJAG00000012172	SYMPK	99	97.460	ENSPPAG00000043204	SYMPK	100	99.200	Pan_paniscus
ENSCJAG00000012172	SYMPK	99	97.084	ENSPPRG00000004282	SYMPK	100	94.501	Panthera_pardus
ENSCJAG00000012172	SYMPK	99	97.084	ENSPTIG00000015420	SYMPK	94	98.927	Panthera_tigris_altaica
ENSCJAG00000012172	SYMPK	99	97.460	ENSPTRG00000011169	SYMPK	100	99.200	Pan_troglodytes
ENSCJAG00000012172	SYMPK	99	97.460	ENSPANG00000019930	SYMPK	100	99.200	Papio_anubis
ENSCJAG00000012172	SYMPK	99	74.720	ENSPKIG00000017132	sympk	96	72.881	Paramormyrops_kingsleyae
ENSCJAG00000012172	SYMPK	99	95.767	ENSPEMG00000007564	Sympk	100	90.257	Peromyscus_maniculatus_bairdii
ENSCJAG00000012172	SYMPK	93	65.566	ENSPMAG00000004936	sympk	100	65.679	Petromyzon_marinus
ENSCJAG00000012172	SYMPK	99	91.423	ENSPCIG00000024476	SYMPK	95	89.456	Phascolarctos_cinereus
ENSCJAG00000012172	SYMPK	97	74.640	ENSPFOG00000001194	sympk	89	75.941	Poecilia_formosa
ENSCJAG00000012172	SYMPK	97	74.544	ENSPLAG00000012995	sympk	89	75.849	Poecilia_latipinna
ENSCJAG00000012172	SYMPK	97	74.544	ENSPMEG00000008099	sympk	89	75.849	Poecilia_mexicana
ENSCJAG00000012172	SYMPK	97	74.544	ENSPREG00000006176	sympk	89	75.849	Poecilia_reticulata
ENSCJAG00000012172	SYMPK	99	97.366	ENSPPYG00000010135	SYMPK	99	99.276	Pongo_abelii
ENSCJAG00000012172	SYMPK	94	91.252	ENSPCAG00000005182	SYMPK	94	91.252	Procavia_capensis
ENSCJAG00000012172	SYMPK	99	96.896	ENSPCOG00000023740	SYMPK	100	99.200	Propithecus_coquereli
ENSCJAG00000012172	SYMPK	99	94.826	ENSPVAG00000001355	SYMPK	100	92.742	Pteropus_vampyrus
ENSCJAG00000012172	SYMPK	97	74.025	ENSPNYG00000011455	sympk	90	74.686	Pundamilia_nyererei
ENSCJAG00000012172	SYMPK	99	74.227	ENSPNAG00000016505	sympk	89	75.312	Pygocentrus_nattereri
ENSCJAG00000012172	SYMPK	99	95.484	ENSRNOG00000014353	Sympk	95	96.496	Rattus_norvegicus
ENSCJAG00000012172	SYMPK	100	97.191	ENSRBIG00000040963	SYMPK	100	99.200	Rhinopithecus_bieti
ENSCJAG00000012172	SYMPK	99	97.460	ENSRROG00000024834	SYMPK	97	99.611	Rhinopithecus_roxellana
ENSCJAG00000012172	SYMPK	99	97.648	ENSSBOG00000034497	SYMPK	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000012172	SYMPK	99	90.499	ENSSHAG00000003139	SYMPK	99	91.240	Sarcophilus_harrisii
ENSCJAG00000012172	SYMPK	99	75.000	ENSSFOG00015006974	sympk	90	76.182	Scleropages_formosus
ENSCJAG00000012172	SYMPK	96	74.131	ENSSMAG00000018130	sympk	71	75.208	Scophthalmus_maximus
ENSCJAG00000012172	SYMPK	97	73.855	ENSSDUG00000007092	sympk	90	75.205	Seriola_dumerili
ENSCJAG00000012172	SYMPK	97	73.855	ENSSLDG00000014774	sympk	96	72.176	Seriola_lalandi_dorsalis
ENSCJAG00000012172	SYMPK	64	100.000	ENSSARG00000004274	-	66	100.000	Sorex_araneus
ENSCJAG00000012172	SYMPK	99	85.983	ENSSPUG00000002789	SYMPK	96	79.984	Sphenodon_punctatus
ENSCJAG00000012172	SYMPK	98	73.880	ENSSPAG00000000854	sympk	92	73.932	Stegastes_partitus
ENSCJAG00000012172	SYMPK	99	96.990	ENSSSCG00000003093	SYMPK	100	94.571	Sus_scrofa
ENSCJAG00000012172	SYMPK	97	74.283	ENSTRUG00000010202	sympk	91	74.527	Takifugu_rubripes
ENSCJAG00000012172	SYMPK	97	73.518	ENSTNIG00000017855	sympk	98	73.784	Tetraodon_nigroviridis
ENSCJAG00000012172	SYMPK	92	94.805	ENSTBEG00000000454	SYMPK	88	94.805	Tupaia_belangeri
ENSCJAG00000012172	SYMPK	100	86.039	ENSTTRG00000014311	SYMPK	100	85.882	Tursiops_truncatus
ENSCJAG00000012172	SYMPK	99	94.073	ENSUAMG00000022272	SYMPK	95	98.190	Ursus_americanus
ENSCJAG00000012172	SYMPK	99	96.707	ENSUMAG00000023698	SYMPK	100	93.804	Ursus_maritimus
ENSCJAG00000012172	SYMPK	99	97.272	ENSVVUG00000003024	SYMPK	99	97.979	Vulpes_vulpes
ENSCJAG00000012172	SYMPK	97	73.257	ENSXETG00000024453	sympk	94	72.830	Xenopus_tropicalis
ENSCJAG00000012172	SYMPK	95	73.268	ENSXCOG00000015368	sympk	100	74.468	Xiphophorus_couchianus
ENSCJAG00000012172	SYMPK	96	74.589	ENSXMAG00000005737	sympk	90	75.849	Xiphophorus_maculatus