EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000012233 (Gene tree)
Gene ID: 100385962
Gene Symbol: DDX56
Alias: NOH61
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 7426 bases
Position: chrNTIC01002224.1:11810514-11817939
Accession: 100385962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000054959	ResIII	PF04851.15	3.3e-07	1	1
ENSCJAP00000022554	ResIII	PF04851.15	3.8e-07	1	1
ENSCJAP00000054959	DEAD	PF00270.29	5.2e-38	1	1
ENSCJAP00000022554	DEAD	PF00270.29	5.9e-38	1	1
ENSCJAP00000055552	DEAD	PF00270.29	9.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000023856	DDX56-201	1644	-	ENSCJAP00000022554	547 (aa)	XP_002751433	F7IAV9
ENSCJAT00000078726	DDX56-203	312	-	ENSCJAP00000055552	103 (aa)	-	A0A2R8M8M8
ENSCJAT00000076347	DDX56-202	1524	-	ENSCJAP00000054959	507 (aa)	-	A0A2R8M7B3

Gene Model

Click here to download ENSCJAG00000012233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000012233	DDX56	54	53.571	ENSCJAG00000015190	DDX52	57	33.146
ENSCJAG00000012233	DDX56	53	47.273	ENSCJAG00000021414	DDX18	52	32.133
ENSCJAG00000012233	DDX56	65	30.172	ENSCJAG00000009966	DDX43	53	30.172
ENSCJAG00000012233	DDX56	61	50.794	ENSCJAG00000021633	DDX47	86	37.872
ENSCJAG00000012233	DDX56	63	47.692	ENSCJAG00000013591	DDX6	74	31.649
ENSCJAG00000012233	DDX56	58	48.333	ENSCJAG00000020471	-	61	31.099
ENSCJAG00000012233	DDX56	70	44.000	ENSCJAG00000018173	DDX31	61	35.772
ENSCJAG00000012233	DDX56	58	41.667	ENSCJAG00000004760	DDX39A	72	31.500
ENSCJAG00000012233	DDX56	69	43.056	ENSCJAG00000005183	DDX59	57	30.435
ENSCJAG00000012233	DDX56	57	40.678	ENSCJAG00000020470	-	82	35.000
ENSCJAG00000012233	DDX56	60	48.387	ENSCJAG00000042114	DDX49	75	31.746
ENSCJAG00000012233	DDX56	70	30.518	ENSCJAG00000015114	EIF4A1	88	30.189
ENSCJAG00000012233	DDX56	56	46.667	ENSCJAG00000014587	-	77	30.886
ENSCJAG00000012233	DDX56	66	44.928	ENSCJAG00000045019	-	85	33.523
ENSCJAG00000012233	DDX56	68	49.180	ENSCJAG00000007076	DDX1	54	49.180
ENSCJAG00000012233	DDX56	66	30.000	ENSCJAG00000015787	DDX3X	53	31.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000012233	DDX56	100	97.623	ENSG00000136271	DDX56	100	97.867	Homo_sapiens
ENSCJAG00000012233	DDX56	98	64.324	ENSAPOG00000017113	ddx56	98	64.685	Acanthochromis_polyacanthus
ENSCJAG00000012233	DDX56	100	90.311	ENSAMEG00000017711	DDX56	100	90.311	Ailuropoda_melanoleuca
ENSCJAG00000012233	DDX56	92	60.196	ENSACIG00000013747	ddx56	98	66.120	Amphilophus_citrinellus
ENSCJAG00000012233	DDX56	88	67.213	ENSAOCG00000015447	-	87	67.213	Amphiprion_ocellaris
ENSCJAG00000012233	DDX56	97	64.325	ENSAOCG00000018059	ddx56	99	64.325	Amphiprion_ocellaris
ENSCJAG00000012233	DDX56	99	63.864	ENSAPEG00000007267	ddx56	99	63.864	Amphiprion_percula
ENSCJAG00000012233	DDX56	98	64.079	ENSATEG00000005279	ddx56	98	64.855	Anabas_testudineus
ENSCJAG00000012233	DDX56	99	63.620	ENSACLG00000020113	ddx56	99	63.978	Astatotilapia_calliptera
ENSCJAG00000012233	DDX56	99	60.428	ENSAMXG00000019357	ddx56	99	60.606	Astyanax_mexicanus
ENSCJAG00000012233	DDX56	100	91.773	ENSBTAG00000010602	DDX56	100	91.773	Bos_taurus
ENSCJAG00000012233	DDX56	97	40.687	WBGene00016073	C24H12.4	85	40.687	Caenorhabditis_elegans
ENSCJAG00000012233	DDX56	82	89.038	ENSCAFG00000029295	DDX56	100	89.038	Canis_familiaris
ENSCJAG00000012233	DDX56	100	85.949	ENSCAFG00020019695	DDX56	100	87.342	Canis_lupus_dingo
ENSCJAG00000012233	DDX56	100	91.773	ENSCHIG00000014261	DDX56	100	91.773	Capra_hircus
ENSCJAG00000012233	DDX56	100	95.612	ENSTSYG00000008048	DDX56	100	95.612	Carlito_syrichta
ENSCJAG00000012233	DDX56	86	90.084	ENSCAPG00000006286	DDX56	100	90.084	Cavia_aperea
ENSCJAG00000012233	DDX56	100	90.693	ENSCPOG00000003359	DDX56	100	90.693	Cavia_porcellus
ENSCJAG00000012233	DDX56	100	98.422	ENSCCAG00000025303	DDX56	100	98.422	Cebus_capucinus
ENSCJAG00000012233	DDX56	100	97.441	ENSCATG00000039389	DDX56	100	97.441	Cercocebus_atys
ENSCJAG00000012233	DDX56	100	92.322	ENSCLAG00000007666	DDX56	100	92.322	Chinchilla_lanigera
ENSCJAG00000012233	DDX56	100	97.623	ENSCSAG00000015636	DDX56	100	97.623	Chlorocebus_sabaeus
ENSCJAG00000012233	DDX56	98	68.545	ENSCPBG00000024556	DDX56	98	68.545	Chrysemys_picta_bellii
ENSCJAG00000012233	DDX56	92	55.577	ENSCING00000005185	-	99	55.773	Ciona_intestinalis
ENSCJAG00000012233	DDX56	91	54.257	ENSCSAVG00000011266	-	99	54.257	Ciona_savignyi
ENSCJAG00000012233	DDX56	100	97.075	ENSCANG00000028187	DDX56	100	97.075	Colobus_angolensis_palliatus
ENSCJAG00000012233	DDX56	100	89.580	ENSCGRG00001019019	Ddx56	100	89.580	Cricetulus_griseus_chok1gshd
ENSCJAG00000012233	DDX56	100	89.580	ENSCGRG00000011870	Ddx56	100	89.580	Cricetulus_griseus_crigri
ENSCJAG00000012233	DDX56	98	64.158	ENSCSEG00000008368	ddx56	98	64.748	Cynoglossus_semilaevis
ENSCJAG00000012233	DDX56	99	64.440	ENSCVAG00000006499	ddx56	99	64.568	Cyprinodon_variegatus
ENSCJAG00000012233	DDX56	98	63.818	ENSDARG00000020913	ddx56	98	64.909	Danio_rerio
ENSCJAG00000012233	DDX56	86	90.063	ENSDNOG00000036526	DDX56	99	90.063	Dasypus_novemcinctus
ENSCJAG00000012233	DDX56	73	96.000	ENSDORG00000026173	-	100	94.595	Dipodomys_ordii
ENSCJAG00000012233	DDX56	92	49.012	FBgn0001565	Hlc	89	49.012	Drosophila_melanogaster
ENSCJAG00000012233	DDX56	87	60.842	ENSETEG00000019559	-	100	60.211	Echinops_telfairi
ENSCJAG00000012233	DDX56	72	94.595	ENSETEG00000002969	-	83	80.542	Echinops_telfairi
ENSCJAG00000012233	DDX56	98	58.018	ENSEBUG00000009986	ddx56	99	58.739	Eptatretus_burgeri
ENSCJAG00000012233	DDX56	100	91.956	ENSEASG00005017795	DDX56	100	92.870	Equus_asinus_asinus
ENSCJAG00000012233	DDX56	100	91.773	ENSECAG00000019897	DDX56	100	92.702	Equus_caballus
ENSCJAG00000012233	DDX56	86	91.543	ENSEEUG00000004849	DDX56	100	91.543	Erinaceus_europaeus
ENSCJAG00000012233	DDX56	97	65.688	ENSELUG00000004150	ddx56	97	65.876	Esox_lucius
ENSCJAG00000012233	DDX56	99	90.074	ENSFCAG00000010261	DDX56	99	90.257	Felis_catus
ENSCJAG00000012233	DDX56	100	91.408	ENSFDAG00000007128	DDX56	100	91.408	Fukomys_damarensis
ENSCJAG00000012233	DDX56	99	63.670	ENSFHEG00000018008	ddx56	99	64.587	Fundulus_heteroclitus
ENSCJAG00000012233	DDX56	97	62.338	ENSGAFG00000006906	ddx56	97	62.338	Gambusia_affinis
ENSCJAG00000012233	DDX56	94	70.713	ENSGAGG00000006789	DDX56	93	70.713	Gopherus_agassizii
ENSCJAG00000012233	DDX56	100	97.623	ENSGGOG00000012031	DDX56	100	97.623	Gorilla_gorilla
ENSCJAG00000012233	DDX56	92	62.549	ENSHBUG00000015246	ddx56	92	62.403	Haplochromis_burtoni
ENSCJAG00000012233	DDX56	100	91.225	ENSHGLG00000017271	DDX56	100	91.225	Heterocephalus_glaber_female
ENSCJAG00000012233	DDX56	100	91.225	ENSHGLG00100015731	DDX56	100	91.225	Heterocephalus_glaber_male
ENSCJAG00000012233	DDX56	97	64.140	ENSHCOG00000001685	ddx56	97	64.140	Hippocampus_comes
ENSCJAG00000012233	DDX56	99	61.593	ENSIPUG00000006602	ddx56	98	61.593	Ictalurus_punctatus
ENSCJAG00000012233	DDX56	100	92.322	ENSSTOG00000000464	DDX56	100	92.322	Ictidomys_tridecemlineatus
ENSCJAG00000012233	DDX56	99	90.792	ENSJJAG00000014269	Ddx56	100	90.792	Jaculus_jaculus
ENSCJAG00000012233	DDX56	98	62.877	ENSKMAG00000016611	ddx56	98	64.324	Kryptolebias_marmoratus
ENSCJAG00000012233	DDX56	98	63.670	ENSLBEG00000026281	ddx56	98	63.738	Labrus_bergylta
ENSCJAG00000012233	DDX56	97	66.114	ENSLACG00000015551	DDX56	97	66.606	Latimeria_chalumnae
ENSCJAG00000012233	DDX56	99	63.685	ENSLOCG00000015185	ddx56	98	64.557	Lepisosteus_oculatus
ENSCJAG00000012233	DDX56	99	91.529	ENSLAFG00000018206	DDX56	99	91.529	Loxodonta_africana
ENSCJAG00000012233	DDX56	100	97.623	ENSMFAG00000041001	DDX56	100	97.623	Macaca_fascicularis
ENSCJAG00000012233	DDX56	100	97.441	ENSMMUG00000002645	DDX56	100	97.441	Macaca_mulatta
ENSCJAG00000012233	DDX56	100	97.441	ENSMNEG00000028492	DDX56	100	97.441	Macaca_nemestrina
ENSCJAG00000012233	DDX56	100	97.441	ENSMLEG00000043591	DDX56	100	97.441	Mandrillus_leucophaeus
ENSCJAG00000012233	DDX56	98	64.388	ENSMAMG00000007776	ddx56	98	64.748	Mastacembelus_armatus
ENSCJAG00000012233	DDX56	99	63.620	ENSMZEG00005009813	ddx56	99	63.978	Maylandia_zebra
ENSCJAG00000012233	DDX56	80	85.366	ENSMAUG00000019569	-	89	89.744	Mesocricetus_auratus
ENSCJAG00000012233	DDX56	100	95.069	ENSMICG00000005550	DDX56	100	95.069	Microcebus_murinus
ENSCJAG00000012233	DDX56	100	90.128	ENSMOCG00000016782	Ddx56	100	90.128	Microtus_ochrogaster
ENSCJAG00000012233	DDX56	91	67.787	ENSMMOG00000009654	ddx56	95	68.379	Mola_mola
ENSCJAG00000012233	DDX56	100	76.503	ENSMODG00000016137	DDX56	99	76.503	Monodelphis_domestica
ENSCJAG00000012233	DDX56	68	77.143	ENSMALG00000016910	ddx56	99	64.706	Monopterus_albus
ENSCJAG00000012233	DDX56	100	90.311	MGP_CAROLIEiJ_G0016069	Ddx56	100	90.311	Mus_caroli
ENSCJAG00000012233	DDX56	100	90.311	ENSMUSG00000004393	Ddx56	100	90.311	Mus_musculus
ENSCJAG00000012233	DDX56	100	89.945	MGP_PahariEiJ_G0016822	Ddx56	100	89.945	Mus_pahari
ENSCJAG00000012233	DDX56	100	90.311	MGP_SPRETEiJ_G0016911	Ddx56	100	90.311	Mus_spretus
ENSCJAG00000012233	DDX56	100	90.311	ENSMPUG00000018196	DDX56	88	90.311	Mustela_putorius_furo
ENSCJAG00000012233	DDX56	100	91.773	ENSMLUG00000003509	DDX56	100	91.773	Myotis_lucifugus
ENSCJAG00000012233	DDX56	100	92.322	ENSNGAG00000018785	Ddx56	100	92.322	Nannospalax_galili
ENSCJAG00000012233	DDX56	91	67.865	ENSNBRG00000002656	ddx56	97	64.811	Neolamprologus_brichardi
ENSCJAG00000012233	DDX56	100	97.441	ENSNLEG00000003816	DDX56	100	97.441	Nomascus_leucogenys
ENSCJAG00000012233	DDX56	91	78.024	ENSMEUG00000006788	DDX56	100	78.024	Notamacropus_eugenii
ENSCJAG00000012233	DDX56	100	89.762	ENSOPRG00000000292	-	100	89.762	Ochotona_princeps
ENSCJAG00000012233	DDX56	73	94.667	ENSODEG00000014807	DDX56	100	94.933	Octodon_degus
ENSCJAG00000012233	DDX56	99	65.498	ENSONIG00000011509	ddx56	99	65.498	Oreochromis_niloticus
ENSCJAG00000012233	DDX56	72	82.432	ENSOANG00000015987	-	95	71.011	Ornithorhynchus_anatinus
ENSCJAG00000012233	DDX56	67	88.406	ENSOANG00000020827	-	100	74.312	Ornithorhynchus_anatinus
ENSCJAG00000012233	DDX56	97	69.418	ENSOANG00000006320	-	100	70.169	Ornithorhynchus_anatinus
ENSCJAG00000012233	DDX56	100	90.859	ENSOCUG00000022918	DDX56	100	90.859	Oryctolagus_cuniculus
ENSCJAG00000012233	DDX56	97	66.300	ENSORLG00000001434	ddx56	97	66.300	Oryzias_latipes
ENSCJAG00000012233	DDX56	99	65.704	ENSORLG00020015718	ddx56	95	65.704	Oryzias_latipes_hni
ENSCJAG00000012233	DDX56	97	66.300	ENSORLG00015003004	ddx56	93	66.300	Oryzias_latipes_hsok
ENSCJAG00000012233	DDX56	99	65.116	ENSOMEG00000022072	ddx56	99	65.419	Oryzias_melastigma
ENSCJAG00000012233	DDX56	100	93.967	ENSOGAG00000009981	DDX56	100	93.967	Otolemur_garnettii
ENSCJAG00000012233	DDX56	100	91.956	ENSOARG00000015240	DDX56	100	91.956	Ovis_aries
ENSCJAG00000012233	DDX56	100	96.117	ENSPPAG00000029147	DDX56	100	96.117	Pan_paniscus
ENSCJAG00000012233	DDX56	100	79.053	ENSPPAG00000031263	-	100	78.871	Pan_paniscus
ENSCJAG00000012233	DDX56	99	89.706	ENSPPRG00000014594	DDX56	99	89.706	Panthera_pardus
ENSCJAG00000012233	DDX56	86	87.660	ENSPTIG00000019500	DDX56	92	87.872	Panthera_tigris_altaica
ENSCJAG00000012233	DDX56	100	97.623	ENSPTRG00000019147	DDX56	100	97.623	Pan_troglodytes
ENSCJAG00000012233	DDX56	94	81.081	ENSPTRG00000052765	-	100	80.888	Pan_troglodytes
ENSCJAG00000012233	DDX56	100	97.075	ENSPANG00000002446	DDX56	100	97.075	Papio_anubis
ENSCJAG00000012233	DDX56	99	64.158	ENSPKIG00000018998	ddx56	99	64.158	Paramormyrops_kingsleyae
ENSCJAG00000012233	DDX56	95	65.283	ENSPMGG00000017421	ddx56	98	65.283	Periophthalmus_magnuspinnatus
ENSCJAG00000012233	DDX56	75	90.909	ENSPEMG00000018351	-	96	87.755	Peromyscus_maniculatus_bairdii
ENSCJAG00000012233	DDX56	100	84.699	ENSPCIG00000009336	DDX56	99	84.699	Phascolarctos_cinereus
ENSCJAG00000012233	DDX56	97	64.481	ENSPFOG00000018658	ddx56	97	64.909	Poecilia_formosa
ENSCJAG00000012233	DDX56	99	63.486	ENSPLAG00000019208	ddx56	97	64.909	Poecilia_latipinna
ENSCJAG00000012233	DDX56	99	63.455	ENSPMEG00000001775	ddx56	97	64.909	Poecilia_mexicana
ENSCJAG00000012233	DDX56	99	64.000	ENSPREG00000015142	ddx56	97	64.684	Poecilia_reticulata
ENSCJAG00000012233	DDX56	100	98.172	ENSPPYG00000017591	DDX56	100	98.172	Pongo_abelii
ENSCJAG00000012233	DDX56	96	90.512	ENSPCAG00000011499	DDX56	100	90.512	Procavia_capensis
ENSCJAG00000012233	DDX56	100	95.858	ENSPCOG00000024864	DDX56	100	95.858	Propithecus_coquereli
ENSCJAG00000012233	DDX56	88	93.023	ENSPVAG00000000791	DDX56	88	93.023	Pteropus_vampyrus
ENSCJAG00000012233	DDX56	99	63.441	ENSPNYG00000019212	ddx56	99	63.799	Pundamilia_nyererei
ENSCJAG00000012233	DDX56	98	63.755	ENSPNAG00000025446	ddx56	99	64.014	Pygocentrus_nattereri
ENSCJAG00000012233	DDX56	100	90.494	ENSRNOG00000004670	Ddx56	100	90.494	Rattus_norvegicus
ENSCJAG00000012233	DDX56	100	97.441	ENSRBIG00000030140	DDX56	100	97.441	Rhinopithecus_bieti
ENSCJAG00000012233	DDX56	100	97.075	ENSRROG00000044428	DDX56	100	97.075	Rhinopithecus_roxellana
ENSCJAG00000012233	DDX56	96	45.622	YLR276C	-	98	42.295	Saccharomyces_cerevisiae
ENSCJAG00000012233	DDX56	100	98.720	ENSSBOG00000034339	DDX56	100	98.720	Saimiri_boliviensis_boliviensis
ENSCJAG00000012233	DDX56	86	83.579	ENSSHAG00000016615	DDX56	99	83.579	Sarcophilus_harrisii
ENSCJAG00000012233	DDX56	98	65.392	ENSSFOG00015012795	ddx56	98	65.392	Scleropages_formosus
ENSCJAG00000012233	DDX56	99	64.337	ENSSMAG00000011280	ddx56	97	66.168	Scophthalmus_maximus
ENSCJAG00000012233	DDX56	99	63.815	ENSSDUG00000023597	ddx56	99	65.062	Seriola_dumerili
ENSCJAG00000012233	DDX56	99	63.815	ENSSLDG00000018369	ddx56	99	65.062	Seriola_lalandi_dorsalis
ENSCJAG00000012233	DDX56	75	90.000	ENSSARG00000014363	DDX56	80	88.950	Sorex_araneus
ENSCJAG00000012233	DDX56	99	68.727	ENSSPUG00000000784	DDX56	96	68.727	Sphenodon_punctatus
ENSCJAG00000012233	DDX56	92	67.383	ENSSPAG00000009392	ddx56	95	67.568	Stegastes_partitus
ENSCJAG00000012233	DDX56	99	92.449	ENSSSCG00000016745	DDX56	99	92.449	Sus_scrofa
ENSCJAG00000012233	DDX56	67	69.565	ENSTGUG00000016252	-	100	69.565	Taeniopygia_guttata
ENSCJAG00000012233	DDX56	99	64.404	ENSTRUG00000018623	ddx56	99	64.404	Takifugu_rubripes
ENSCJAG00000012233	DDX56	98	61.922	ENSTNIG00000013593	ddx56	99	62.278	Tetraodon_nigroviridis
ENSCJAG00000012233	DDX56	100	92.139	ENSTBEG00000007119	DDX56	100	92.139	Tupaia_belangeri
ENSCJAG00000012233	DDX56	86	90.063	ENSTTRG00000010552	DDX56	100	90.063	Tursiops_truncatus
ENSCJAG00000012233	DDX56	100	90.676	ENSUAMG00000014194	DDX56	100	90.676	Ursus_americanus
ENSCJAG00000012233	DDX56	100	90.676	ENSUMAG00000009666	DDX56	100	90.676	Ursus_maritimus
ENSCJAG00000012233	DDX56	72	95.946	ENSVPAG00000000136	-	58	95.946	Vicugna_pacos
ENSCJAG00000012233	DDX56	100	89.580	ENSVVUG00000011905	DDX56	100	89.580	Vulpes_vulpes
ENSCJAG00000012233	DDX56	98	65.756	ENSXETG00000019000	ddx56	99	66.849	Xenopus_tropicalis
ENSCJAG00000012233	DDX56	99	63.670	ENSXCOG00000017413	ddx56	97	64.353	Xiphophorus_couchianus
ENSCJAG00000012233	DDX56	99	63.636	ENSXMAG00000018749	ddx56	97	64.312	Xiphophorus_maculatus