EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000012253 (Gene tree)
Gene ID: 100398039
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 1736 bases
Position: chrNTIC01033945.1:106486-108221
Accession: 100398039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000022462	PseudoU_synth_2	PF00849.22	2.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000023756	RPUSD1-201	939	-	ENSCJAP00000022462	312 (aa)	XP_002755784	F7ISB8

Gene Model

Click here to download ENSCJAG00000012253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000012253	RPUSD1	100	93.269	ENSG00000007376	RPUSD1	100	93.452	Homo_sapiens
ENSCJAG00000012253	RPUSD1	98	56.494	ENSAPOG00000022221	rpusd1	98	56.169	Acanthochromis_polyacanthus
ENSCJAG00000012253	RPUSD1	100	80.449	ENSAMEG00000007461	RPUSD1	100	80.128	Ailuropoda_melanoleuca
ENSCJAG00000012253	RPUSD1	98	57.516	ENSACIG00000015863	rpusd1	98	57.516	Amphilophus_citrinellus
ENSCJAG00000012253	RPUSD1	98	55.738	ENSAOCG00000021975	rpusd1	95	56.494	Amphiprion_ocellaris
ENSCJAG00000012253	RPUSD1	98	55.410	ENSAPEG00000001316	rpusd1	95	56.169	Amphiprion_percula
ENSCJAG00000012253	RPUSD1	81	64.427	ENSATEG00000002984	rpusd1	98	56.721	Anabas_testudineus
ENSCJAG00000012253	RPUSD1	79	58.704	ENSAPLG00000012316	RPUSD1	99	58.704	Anas_platyrhynchos
ENSCJAG00000012253	RPUSD1	99	64.516	ENSACAG00000008953	RPUSD1	100	63.694	Anolis_carolinensis
ENSCJAG00000012253	RPUSD1	100	97.115	ENSANAG00000024709	RPUSD1	100	97.115	Aotus_nancymaae
ENSCJAG00000012253	RPUSD1	98	57.792	ENSACLG00000013692	rpusd1	98	57.655	Astatotilapia_calliptera
ENSCJAG00000012253	RPUSD1	99	56.825	ENSAMXG00000019802	rpusd1	100	57.643	Astyanax_mexicanus
ENSCJAG00000012253	RPUSD1	100	85.577	ENSBTAG00000000179	RPUSD1	100	85.577	Bos_taurus
ENSCJAG00000012253	RPUSD1	99	81.350	ENSCAFG00000019614	RPUSD1	99	82.315	Canis_familiaris
ENSCJAG00000012253	RPUSD1	99	81.350	ENSCAFG00020008891	RPUSD1	99	82.315	Canis_lupus_dingo
ENSCJAG00000012253	RPUSD1	100	83.974	ENSCHIG00000012872	RPUSD1	100	83.974	Capra_hircus
ENSCJAG00000012253	RPUSD1	99	85.209	ENSTSYG00000036934	RPUSD1	99	84.566	Carlito_syrichta
ENSCJAG00000012253	RPUSD1	100	83.333	ENSCAPG00000014219	RPUSD1	100	82.692	Cavia_aperea
ENSCJAG00000012253	RPUSD1	100	83.333	ENSCPOG00000034604	RPUSD1	100	82.692	Cavia_porcellus
ENSCJAG00000012253	RPUSD1	100	96.795	ENSCCAG00000034385	RPUSD1	100	96.795	Cebus_capucinus
ENSCJAG00000012253	RPUSD1	100	93.910	ENSCATG00000042983	RPUSD1	100	93.910	Cercocebus_atys
ENSCJAG00000012253	RPUSD1	100	83.013	ENSCLAG00000013966	RPUSD1	100	83.333	Chinchilla_lanigera
ENSCJAG00000012253	RPUSD1	100	93.590	ENSCSAG00000012121	RPUSD1	100	93.590	Chlorocebus_sabaeus
ENSCJAG00000012253	RPUSD1	99	64.423	ENSCPBG00000021101	RPUSD1	99	64.423	Chrysemys_picta_bellii
ENSCJAG00000012253	RPUSD1	90	94.306	ENSCANG00000028576	RPUSD1	98	94.203	Colobus_angolensis_palliatus
ENSCJAG00000012253	RPUSD1	100	81.410	ENSCGRG00001014253	Rpusd1	100	80.128	Cricetulus_griseus_chok1gshd
ENSCJAG00000012253	RPUSD1	100	81.410	ENSCGRG00000017995	Rpusd1	100	80.128	Cricetulus_griseus_crigri
ENSCJAG00000012253	RPUSD1	99	54.808	ENSCSEG00000018512	rpusd1	100	54.808	Cynoglossus_semilaevis
ENSCJAG00000012253	RPUSD1	98	55.556	ENSCVAG00000022746	rpusd1	98	54.167	Cyprinodon_variegatus
ENSCJAG00000012253	RPUSD1	99	58.900	ENSDARG00000060192	rpusd1	100	59.425	Danio_rerio
ENSCJAG00000012253	RPUSD1	100	83.654	ENSDNOG00000003721	RPUSD1	100	83.974	Dasypus_novemcinctus
ENSCJAG00000012253	RPUSD1	100	84.936	ENSDORG00000026656	Rpusd1	100	85.577	Dipodomys_ordii
ENSCJAG00000012253	RPUSD1	99	44.681	ENSEBUG00000008767	rpusd1	94	44.681	Eptatretus_burgeri
ENSCJAG00000012253	RPUSD1	99	84.127	ENSEASG00005018421	RPUSD1	75	85.397	Equus_asinus_asinus
ENSCJAG00000012253	RPUSD1	81	59.843	ENSELUG00000014307	rpusd1	88	53.722	Esox_lucius
ENSCJAG00000012253	RPUSD1	100	81.410	ENSFCAG00000010359	RPUSD1	100	81.410	Felis_catus
ENSCJAG00000012253	RPUSD1	99	64.516	ENSFALG00000003211	RPUSD1	100	64.516	Ficedula_albicollis
ENSCJAG00000012253	RPUSD1	100	84.295	ENSFDAG00000013398	RPUSD1	100	83.333	Fukomys_damarensis
ENSCJAG00000012253	RPUSD1	98	54.426	ENSFHEG00000004736	rpusd1	98	54.545	Fundulus_heteroclitus
ENSCJAG00000012253	RPUSD1	98	55.410	ENSGMOG00000010756	rpusd1	98	55.410	Gadus_morhua
ENSCJAG00000012253	RPUSD1	99	63.548	ENSGALG00000005315	RPUSD1	100	62.783	Gallus_gallus
ENSCJAG00000012253	RPUSD1	98	56.169	ENSGAFG00000009886	rpusd1	98	54.232	Gambusia_affinis
ENSCJAG00000012253	RPUSD1	97	56.436	ENSGACG00000014276	rpusd1	97	56.436	Gasterosteus_aculeatus
ENSCJAG00000012253	RPUSD1	99	63.636	ENSGAGG00000004181	RPUSD1	99	63.782	Gopherus_agassizii
ENSCJAG00000012253	RPUSD1	100	92.949	ENSGGOG00000013997	RPUSD1	100	92.949	Gorilla_gorilla
ENSCJAG00000012253	RPUSD1	98	57.468	ENSHBUG00000023728	rpusd1	98	57.329	Haplochromis_burtoni
ENSCJAG00000012253	RPUSD1	100	82.692	ENSHGLG00000002595	RPUSD1	100	83.013	Heterocephalus_glaber_female
ENSCJAG00000012253	RPUSD1	100	82.692	ENSHGLG00100014303	RPUSD1	100	83.013	Heterocephalus_glaber_male
ENSCJAG00000012253	RPUSD1	98	57.516	ENSHCOG00000002390	rpusd1	99	57.516	Hippocampus_comes
ENSCJAG00000012253	RPUSD1	99	59.091	ENSIPUG00000001570	rpusd1	99	59.091	Ictalurus_punctatus
ENSCJAG00000012253	RPUSD1	100	86.859	ENSSTOG00000004276	RPUSD1	100	86.218	Ictidomys_tridecemlineatus
ENSCJAG00000012253	RPUSD1	100	84.615	ENSJJAG00000015696	Rpusd1	100	83.974	Jaculus_jaculus
ENSCJAG00000012253	RPUSD1	98	55.082	ENSKMAG00000017287	rpusd1	98	55.882	Kryptolebias_marmoratus
ENSCJAG00000012253	RPUSD1	98	56.393	ENSLBEG00000022502	rpusd1	98	56.393	Labrus_bergylta
ENSCJAG00000012253	RPUSD1	98	56.393	ENSLBEG00000013354	RPUSD1	98	56.393	Labrus_bergylta
ENSCJAG00000012253	RPUSD1	99	60.129	ENSLACG00000008869	RPUSD1	99	61.165	Latimeria_chalumnae
ENSCJAG00000012253	RPUSD1	69	72.811	ENSLOCG00000005682	rpusd1	99	72.811	Lepisosteus_oculatus
ENSCJAG00000012253	RPUSD1	100	81.410	ENSLAFG00000002115	RPUSD1	100	81.090	Loxodonta_africana
ENSCJAG00000012253	RPUSD1	100	94.231	ENSMFAG00000003961	RPUSD1	100	94.231	Macaca_fascicularis
ENSCJAG00000012253	RPUSD1	100	94.231	ENSMMUG00000000842	RPUSD1	100	94.231	Macaca_mulatta
ENSCJAG00000012253	RPUSD1	100	94.231	ENSMNEG00000042712	RPUSD1	100	94.231	Macaca_nemestrina
ENSCJAG00000012253	RPUSD1	100	94.231	ENSMLEG00000030591	RPUSD1	100	94.231	Mandrillus_leucophaeus
ENSCJAG00000012253	RPUSD1	98	57.190	ENSMAMG00000004735	rpusd1	98	57.190	Mastacembelus_armatus
ENSCJAG00000012253	RPUSD1	98	57.792	ENSMZEG00005003214	rpusd1	98	57.655	Maylandia_zebra
ENSCJAG00000012253	RPUSD1	97	62.706	ENSMGAG00000005447	RPUSD1	99	61.921	Meleagris_gallopavo
ENSCJAG00000012253	RPUSD1	84	76.604	ENSMAUG00000019998	Rpusd1	99	76.604	Mesocricetus_auratus
ENSCJAG00000012253	RPUSD1	100	88.141	ENSMICG00000017561	RPUSD1	100	88.141	Microcebus_murinus
ENSCJAG00000012253	RPUSD1	99	83.280	ENSMOCG00000014082	Rpusd1	99	82.958	Microtus_ochrogaster
ENSCJAG00000012253	RPUSD1	79	64.082	ENSMMOG00000012569	rpusd1	90	64.082	Mola_mola
ENSCJAG00000012253	RPUSD1	100	66.139	ENSMODG00000016882	RPUSD1	100	66.562	Monodelphis_domestica
ENSCJAG00000012253	RPUSD1	98	58.117	ENSMALG00000017818	rpusd1	98	57.516	Monopterus_albus
ENSCJAG00000012253	RPUSD1	100	83.013	MGP_CAROLIEiJ_G0021244	Rpusd1	100	82.692	Mus_caroli
ENSCJAG00000012253	RPUSD1	100	83.013	ENSMUSG00000041199	Rpusd1	100	82.692	Mus_musculus
ENSCJAG00000012253	RPUSD1	100	80.892	MGP_PahariEiJ_G0023562	Rpusd1	99	81.672	Mus_pahari
ENSCJAG00000012253	RPUSD1	100	83.013	MGP_SPRETEiJ_G0022155	Rpusd1	100	82.692	Mus_spretus
ENSCJAG00000012253	RPUSD1	100	79.167	ENSMPUG00000015897	RPUSD1	100	79.808	Mustela_putorius_furo
ENSCJAG00000012253	RPUSD1	100	86.859	ENSMLUG00000001089	RPUSD1	100	86.859	Myotis_lucifugus
ENSCJAG00000012253	RPUSD1	100	84.295	ENSNGAG00000003595	Rpusd1	100	84.295	Nannospalax_galili
ENSCJAG00000012253	RPUSD1	79	64.777	ENSNBRG00000006457	rpusd1	98	56.863	Neolamprologus_brichardi
ENSCJAG00000012253	RPUSD1	56	91.429	ENSNLEG00000008424	-	100	91.429	Nomascus_leucogenys
ENSCJAG00000012253	RPUSD1	100	69.872	ENSMEUG00000016049	RPUSD1	100	67.949	Notamacropus_eugenii
ENSCJAG00000012253	RPUSD1	99	77.097	ENSOPRG00000008340	RPUSD1	99	76.129	Ochotona_princeps
ENSCJAG00000012253	RPUSD1	100	82.051	ENSODEG00000016945	RPUSD1	100	81.731	Octodon_degus
ENSCJAG00000012253	RPUSD1	98	56.818	ENSONIG00000015672	rpusd1	99	56.678	Oreochromis_niloticus
ENSCJAG00000012253	RPUSD1	99	56.913	ENSORLG00000013009	rpusd1	99	56.818	Oryzias_latipes
ENSCJAG00000012253	RPUSD1	99	56.151	ENSORLG00020010382	rpusd1	99	56.494	Oryzias_latipes_hni
ENSCJAG00000012253	RPUSD1	99	55.949	ENSORLG00015021354	rpusd1	99	55.844	Oryzias_latipes_hsok
ENSCJAG00000012253	RPUSD1	98	57.049	ENSOMEG00000021426	rpusd1	98	57.049	Oryzias_melastigma
ENSCJAG00000012253	RPUSD1	100	90.064	ENSOGAG00000003795	RPUSD1	100	90.064	Otolemur_garnettii
ENSCJAG00000012253	RPUSD1	100	84.615	ENSOARG00000014254	RPUSD1	100	84.615	Ovis_aries
ENSCJAG00000012253	RPUSD1	100	92.949	ENSPPAG00000034797	RPUSD1	100	92.949	Pan_paniscus
ENSCJAG00000012253	RPUSD1	100	81.731	ENSPPRG00000012389	RPUSD1	100	80.000	Panthera_pardus
ENSCJAG00000012253	RPUSD1	100	81.410	ENSPTIG00000008545	RPUSD1	92	79.683	Panthera_tigris_altaica
ENSCJAG00000012253	RPUSD1	100	92.949	ENSPTRG00000007565	RPUSD1	100	92.949	Pan_troglodytes
ENSCJAG00000012253	RPUSD1	100	93.590	ENSPANG00000024401	RPUSD1	100	93.590	Papio_anubis
ENSCJAG00000012253	RPUSD1	99	59.677	ENSPKIG00000018890	rpusd1	91	58.974	Paramormyrops_kingsleyae
ENSCJAG00000012253	RPUSD1	99	64.725	ENSPSIG00000013945	RPUSD1	100	64.725	Pelodiscus_sinensis
ENSCJAG00000012253	RPUSD1	98	56.393	ENSPMGG00000014950	rpusd1	98	56.066	Periophthalmus_magnuspinnatus
ENSCJAG00000012253	RPUSD1	100	81.731	ENSPEMG00000000497	Rpusd1	100	82.051	Peromyscus_maniculatus_bairdii
ENSCJAG00000012253	RPUSD1	82	56.977	ENSPMAG00000001563	rpusd1	81	57.769	Petromyzon_marinus
ENSCJAG00000012253	RPUSD1	100	68.371	ENSPCIG00000021216	-	94	67.949	Phascolarctos_cinereus
ENSCJAG00000012253	RPUSD1	98	57.705	ENSPFOG00000007946	rpusd1	98	57.705	Poecilia_formosa
ENSCJAG00000012253	RPUSD1	98	57.705	ENSPLAG00000011925	rpusd1	98	57.705	Poecilia_latipinna
ENSCJAG00000012253	RPUSD1	98	57.377	ENSPMEG00000002910	rpusd1	98	57.377	Poecilia_mexicana
ENSCJAG00000012253	RPUSD1	98	57.516	ENSPREG00000019851	rpusd1	98	56.090	Poecilia_reticulata
ENSCJAG00000012253	RPUSD1	100	69.551	ENSPCAG00000002258	RPUSD1	100	69.551	Procavia_capensis
ENSCJAG00000012253	RPUSD1	100	89.103	ENSPCOG00000022582	RPUSD1	100	89.103	Propithecus_coquereli
ENSCJAG00000012253	RPUSD1	100	84.295	ENSPVAG00000013104	RPUSD1	100	84.295	Pteropus_vampyrus
ENSCJAG00000012253	RPUSD1	98	57.468	ENSPNYG00000024076	rpusd1	98	57.329	Pundamilia_nyererei
ENSCJAG00000012253	RPUSD1	98	55.556	ENSPNAG00000013806	rpusd1	87	62.016	Pygocentrus_nattereri
ENSCJAG00000012253	RPUSD1	100	82.692	ENSRNOG00000023639	Rpusd1	100	82.372	Rattus_norvegicus
ENSCJAG00000012253	RPUSD1	100	93.590	ENSRBIG00000030238	RPUSD1	100	93.590	Rhinopithecus_bieti
ENSCJAG00000012253	RPUSD1	100	93.590	ENSRROG00000036663	RPUSD1	100	93.590	Rhinopithecus_roxellana
ENSCJAG00000012253	RPUSD1	100	94.231	ENSSBOG00000033063	RPUSD1	100	94.231	Saimiri_boliviensis_boliviensis
ENSCJAG00000012253	RPUSD1	100	67.308	ENSSHAG00000013500	RPUSD1	100	67.308	Sarcophilus_harrisii
ENSCJAG00000012253	RPUSD1	99	61.935	ENSSFOG00015014394	rpusd1	99	60.841	Scleropages_formosus
ENSCJAG00000012253	RPUSD1	98	57.190	ENSSMAG00000008045	rpusd1	91	56.066	Scophthalmus_maximus
ENSCJAG00000012253	RPUSD1	81	66.798	ENSSDUG00000001829	rpusd1	95	58.689	Seriola_dumerili
ENSCJAG00000012253	RPUSD1	81	66.798	ENSSLDG00000020853	rpusd1	95	58.689	Seriola_lalandi_dorsalis
ENSCJAG00000012253	RPUSD1	54	89.222	ENSSARG00000011187	-	100	89.222	Sorex_araneus
ENSCJAG00000012253	RPUSD1	63	53.500	ENSSPUG00000005119	-	100	53.000	Sphenodon_punctatus
ENSCJAG00000012253	RPUSD1	98	56.721	ENSSPAG00000012708	rpusd1	98	56.721	Stegastes_partitus
ENSCJAG00000012253	RPUSD1	100	85.897	ENSSSCG00000008000	RPUSD1	98	89.370	Sus_scrofa
ENSCJAG00000012253	RPUSD1	82	71.875	ENSTGUG00000015375	RPUSD1	100	71.875	Taeniopygia_guttata
ENSCJAG00000012253	RPUSD1	98	55.987	ENSTRUG00000003041	rpusd1	98	55.987	Takifugu_rubripes
ENSCJAG00000012253	RPUSD1	81	61.265	ENSTNIG00000002660	rpusd1	92	61.265	Tetraodon_nigroviridis
ENSCJAG00000012253	RPUSD1	99	86.174	ENSTTRG00000010167	RPUSD1	99	86.174	Tursiops_truncatus
ENSCJAG00000012253	RPUSD1	100	80.449	ENSUAMG00000012736	RPUSD1	100	80.449	Ursus_americanus
ENSCJAG00000012253	RPUSD1	100	80.449	ENSUMAG00000021174	RPUSD1	100	80.449	Ursus_maritimus
ENSCJAG00000012253	RPUSD1	99	80.386	ENSVVUG00000012357	RPUSD1	99	80.386	Vulpes_vulpes
ENSCJAG00000012253	RPUSD1	100	60.897	ENSXETG00000007184	rpusd1	100	60.577	Xenopus_tropicalis
ENSCJAG00000012253	RPUSD1	98	55.882	ENSXCOG00000017930	rpusd1	98	54.808	Xiphophorus_couchianus
ENSCJAG00000012253	RPUSD1	98	56.536	ENSXMAG00000024084	rpusd1	98	55.769	Xiphophorus_maculatus