EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000012436 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 1365 bases
Position: chrNTIC01001113.1:9960723-9962087
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000058863	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000024079	-	1365	-	ENSCJAP00000058863	454 (aa)	-	A0A2R8MFI5

Gene Model

Click here to download ENSCJAG00000012436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000012436	-	99	67.849	ENSCJAG00000013225	SEPT8	96	72.816
ENSCJAG00000012436	-	61	43.793	ENSCJAG00000002577	SEPT1	70	43.793
ENSCJAG00000012436	-	63	43.333	ENSCJAG00000006122	-	82	42.963
ENSCJAG00000012436	-	63	43.345	ENSCJAG00000031147	-	79	43.345
ENSCJAG00000012436	-	92	67.386	ENSCJAG00000021262	SEPT14	99	67.386
ENSCJAG00000012436	-	92	68.810	ENSCJAG00000005022	SEPT6	97	68.990
ENSCJAG00000012436	-	65	44.040	ENSCJAG00000043636	SEPT3	92	45.221
ENSCJAG00000012436	-	63	42.808	ENSCJAG00000013203	SEPT9	80	42.808
ENSCJAG00000012436	-	86	74.807	ENSCJAG00000014744	SEPT11	98	71.635
ENSCJAG00000012436	-	84	42.931	ENSCJAG00000012276	SEPT7	88	43.089

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000012436	-	99	92.274	ENSANAG00000019258	SEPT10	99	92.274	Aotus_nancymaae
ENSCJAG00000012436	-	98	82.619	ENSTSYG00000003452	SEPT10	99	82.619	Carlito_syrichta
ENSCJAG00000012436	-	97	84.055	ENSCPOG00000004533	SEPT10	100	84.055	Cavia_porcellus
ENSCJAG00000012436	-	100	84.802	ENSCLAG00000014565	SEPT10	99	86.620	Chinchilla_lanigera
ENSCJAG00000012436	-	93	81.190	ENSCGRG00001016435	Sept10	98	81.190	Cricetulus_griseus_chok1gshd
ENSCJAG00000012436	-	93	81.190	ENSCGRG00000006494	Sept10	99	81.190	Cricetulus_griseus_crigri
ENSCJAG00000012436	-	85	61.917	FBgn0026361	Sep5	86	63.462	Drosophila_melanogaster
ENSCJAG00000012436	-	96	88.383	ENSEASG00005000138	SEPT10	99	88.383	Equus_asinus_asinus
ENSCJAG00000012436	-	93	88.361	ENSECAG00000014530	SEPT10	96	88.361	Equus_caballus
ENSCJAG00000012436	-	78	87.853	ENSFDAG00000006363	SEPT10	100	87.853	Fukomys_damarensis
ENSCJAG00000012436	-	94	86.183	ENSHGLG00000009526	-	99	86.183	Heterocephalus_glaber_female
ENSCJAG00000012436	-	98	68.610	ENSHGLG00100011391	-	93	67.411	Heterocephalus_glaber_male
ENSCJAG00000012436	-	93	87.143	ENSHGLG00100007615	-	100	86.936	Heterocephalus_glaber_male
ENSCJAG00000012436	-	93	85.714	ENSSTOG00000019829	SEPT10	99	85.714	Ictidomys_tridecemlineatus
ENSCJAG00000012436	-	93	85.476	ENSJJAG00000013785	Sept10	99	85.476	Jaculus_jaculus
ENSCJAG00000012436	-	94	71.127	ENSMGAG00000014835	SEPT10	97	71.127	Meleagris_gallopavo
ENSCJAG00000012436	-	93	83.095	ENSMAUG00000016294	Sept10	98	83.095	Mesocricetus_auratus
ENSCJAG00000012436	-	93	82.619	ENSMOCG00000015244	Sept10	98	82.619	Microtus_ochrogaster
ENSCJAG00000012436	-	92	82.578	MGP_CAROLIEiJ_G0015340	Sept10	98	82.578	Mus_caroli
ENSCJAG00000012436	-	92	82.578	ENSMUSG00000019917	Sept10	98	82.578	Mus_musculus
ENSCJAG00000012436	-	93	82.857	MGP_PahariEiJ_G0030756	Sept10	98	82.857	Mus_pahari
ENSCJAG00000012436	-	92	82.578	MGP_SPRETEiJ_G0016151	Sept10	98	82.578	Mus_spretus
ENSCJAG00000012436	-	94	85.446	ENSNGAG00000013582	Sept10	99	85.446	Nannospalax_galili
ENSCJAG00000012436	-	92	73.333	ENSODEG00000008812	SEPT10	99	73.333	Octodon_degus
ENSCJAG00000012436	-	92	82.816	ENSPEMG00000007611	Sept10	99	82.816	Peromyscus_maniculatus_bairdii
ENSCJAG00000012436	-	87	79.949	ENSPCIG00000011434	-	92	79.949	Phascolarctos_cinereus
ENSCJAG00000012436	-	93	82.979	ENSRNOG00000049507	Sept10	98	82.979	Rattus_norvegicus
ENSCJAG00000012436	-	97	57.859	ENSVPAG00000011990	SEPT10	85	57.859	Vicugna_pacos
ENSCJAG00000012436	-	98	70.022	ENSXETG00000013836	sept10	99	69.710	Xenopus_tropicalis