EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000012500 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 12671 bases
Position: chrNTIC01000001.1:3104770-3117440
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000022907	APOBEC_N	PF08210.11	2e-45	1	1
ENSCJAP00000022907	APOBEC_C	PF05240.14	1.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000024237	-	594	-	ENSCJAP00000022907	197 (aa)	-	F7IHP6

Gene Model

Click here to download ENSCJAG00000012500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000012500	-	98	73.889	ENSCJAG00000023368	APOBEC3G	98	73.889
ENSCJAG00000012500	-	63	44.000	ENSCJAG00000015317	-	95	44.000
ENSCJAG00000012500	-	92	42.077	ENSCJAG00000018856	AICDA	88	42.077
ENSCJAG00000012500	-	91	58.152	ENSCJAG00000011578	-	72	58.152
ENSCJAG00000012500	-	93	37.895	ENSCJAG00000012524	APOBEC3H	90	37.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000012500	-	96	56.701	ENSG00000128383	APOBEC3A	96	56.701	Homo_sapiens
ENSCJAG00000012500	-	100	55.914	ENSG00000179750	APOBEC3B	98	55.914	Homo_sapiens
ENSCJAG00000012500	-	99	51.515	ENSTSYG00000035593	-	99	51.515	Carlito_syrichta
ENSCJAG00000012500	-	100	70.213	ENSCCAG00000027450	-	99	70.213	Cebus_capucinus
ENSCJAG00000012500	-	98	57.143	ENSCATG00000013527	-	99	57.447	Cercocebus_atys
ENSCJAG00000012500	-	98	54.945	ENSCSAG00000006445	-	78	53.158	Chlorocebus_sabaeus
ENSCJAG00000012500	-	70	50.000	ENSCSAG00000018401	-	68	50.000	Chlorocebus_sabaeus
ENSCJAG00000012500	-	99	55.276	ENSCANG00000030513	-	97	55.276	Colobus_angolensis_palliatus
ENSCJAG00000012500	-	100	57.527	ENSGGOG00000006721	APOBEC3B	99	57.527	Gorilla_gorilla
ENSCJAG00000012500	-	98	54.348	ENSMFAG00000008980	APOBEC3A	97	54.348	Macaca_fascicularis
ENSCJAG00000012500	-	98	55.495	ENSMMUG00000004015	-	97	55.495	Macaca_mulatta
ENSCJAG00000012500	-	96	54.639	ENSMMUG00000042504	APOBEC3A	96	54.639	Macaca_mulatta
ENSCJAG00000012500	-	98	51.795	ENSMNEG00000043211	-	93	51.795	Macaca_nemestrina
ENSCJAG00000012500	-	100	56.989	ENSMLEG00000004809	-	99	56.989	Mandrillus_leucophaeus
ENSCJAG00000012500	-	97	57.459	ENSNLEG00000015215	-	85	60.947	Nomascus_leucogenys
ENSCJAG00000012500	-	100	58.065	ENSPPAG00000009288	APOBEC3B	99	58.065	Pan_paniscus
ENSCJAG00000012500	-	100	65.957	ENSPTRG00000014384	APOBEC3B	96	56.410	Pan_troglodytes
ENSCJAG00000012500	-	100	58.378	ENSPANG00000006941	APOBEC3B	99	58.378	Papio_anubis
ENSCJAG00000012500	-	100	56.989	ENSPPYG00000011831	-	98	56.989	Pongo_abelii
ENSCJAG00000012500	-	74	46.358	ENSPCOG00000017606	-	95	46.358	Propithecus_coquereli
ENSCJAG00000012500	-	100	56.757	ENSRBIG00000042829	-	98	56.757	Rhinopithecus_bieti
ENSCJAG00000012500	-	96	60.870	ENSRROG00000028773	APOBEC3G	98	60.870	Rhinopithecus_roxellana