EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000012524 (Gene tree)
Gene ID: 100412309
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 2134 bases
Position: chrNTIC01000001.1:3086100-3088233
Accession: 24100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000022930	APOBEC_N	PF08210.11	7.8e-35	1	1
ENSCJAP00000022935	APOBEC_N	PF08210.11	1e-27	1	1
ENSCJAP00000022930	APOBEC_C	PF05240.14	1.5e-23	1	1
ENSCJAP00000022935	APOBEC_C	PF05240.14	6.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000024260	APOBEC3H-201	588	-	ENSCJAP00000022930	195 (aa)	-	F7IFA5
ENSCJAT00000024266	APOBEC3H-202	450	-	ENSCJAP00000022935	149 (aa)	-	F7IF99

Gene Model

Click here to download ENSCJAG00000012524's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000012524	APOBEC3H	88	39.153	ENSCJAG00000011578	-	74	39.153
ENSCJAG00000012524	APOBEC3H	89	36.702	ENSCJAG00000023368	APOBEC3G	90	36.702
ENSCJAG00000012524	APOBEC3H	90	37.895	ENSCJAG00000012500	-	93	37.895
ENSCJAG00000012524	APOBEC3H	89	31.944	ENSCJAG00000018856	AICDA	89	32.418
ENSCJAG00000012524	APOBEC3H	65	36.220	ENSCJAG00000015317	-	93	36.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000012524	APOBEC3H	100	69.481	ENSG00000100298	APOBEC3H	100	72.078	Homo_sapiens
ENSCJAG00000012524	APOBEC3H	91	48.966	ENSAMEG00000010818	-	76	48.649	Ailuropoda_melanoleuca
ENSCJAG00000012524	APOBEC3H	90	85.946	ENSANAG00000025410	APOBEC3H	83	85.946	Aotus_nancymaae
ENSCJAG00000012524	APOBEC3H	92	51.667	ENSBTAG00000007755	APOBEC3H	93	51.667	Bos_taurus
ENSCJAG00000012524	APOBEC3H	90	52.514	ENSCAFG00000001361	APOBEC3Z3	92	52.514	Canis_familiaris
ENSCJAG00000012524	APOBEC3H	91	51.381	ENSCAFG00020002584	-	91	51.955	Canis_lupus_dingo
ENSCJAG00000012524	APOBEC3H	90	50.556	ENSCHIG00000026580	-	91	50.556	Capra_hircus
ENSCJAG00000012524	APOBEC3H	89	51.124	ENSTSYG00000032894	-	100	51.124	Carlito_syrichta
ENSCJAG00000012524	APOBEC3H	93	50.000	ENSCPOG00000009257	-	87	50.000	Cavia_porcellus
ENSCJAG00000012524	APOBEC3H	100	83.744	ENSCCAG00000008525	APOBEC3H	100	83.744	Cebus_capucinus
ENSCJAG00000012524	APOBEC3H	100	73.000	ENSCATG00000030302	APOBEC3H	100	73.000	Cercocebus_atys
ENSCJAG00000012524	APOBEC3H	90	51.111	ENSCLAG00000016615	-	87	51.111	Chinchilla_lanigera
ENSCJAG00000012524	APOBEC3H	90	69.613	ENSCSAG00000006371	APOBEC3H	86	69.613	Chlorocebus_sabaeus
ENSCJAG00000012524	APOBEC3H	91	50.000	ENSCGRG00001022976	Apobec3	83	48.649	Cricetulus_griseus_chok1gshd
ENSCJAG00000012524	APOBEC3H	91	50.000	ENSCGRG00000005621	Apobec3	83	48.649	Cricetulus_griseus_crigri
ENSCJAG00000012524	APOBEC3H	91	49.655	ENSDORG00000027271	-	81	49.730	Dipodomys_ordii
ENSCJAG00000012524	APOBEC3H	89	54.494	ENSECAG00000007726	APOBEC3H	75	54.494	Equus_caballus
ENSCJAG00000012524	APOBEC3H	90	51.111	ENSFCAG00000005251	APOBEC3Z3	91	51.111	Felis_catus
ENSCJAG00000012524	APOBEC3H	91	54.286	ENSSTOG00000007125	-	85	53.889	Ictidomys_tridecemlineatus
ENSCJAG00000012524	APOBEC3H	87	47.407	ENSJJAG00000016840	-	79	47.407	Jaculus_jaculus
ENSCJAG00000012524	APOBEC3H	91	50.000	ENSLAFG00000027404	-	92	48.876	Loxodonta_africana
ENSCJAG00000012524	APOBEC3H	100	73.000	ENSMFAG00000031827	APOBEC3H	100	73.000	Macaca_fascicularis
ENSCJAG00000012524	APOBEC3H	100	72.078	ENSMMUG00000001016	APOBEC3H	100	72.078	Macaca_mulatta
ENSCJAG00000012524	APOBEC3H	100	73.000	ENSMNEG00000039259	APOBEC3H	100	73.000	Macaca_nemestrina
ENSCJAG00000012524	APOBEC3H	100	73.000	ENSMLEG00000033417	APOBEC3H	100	73.000	Mandrillus_leucophaeus
ENSCJAG00000012524	APOBEC3H	91	49.645	ENSMAUG00000011683	Apobec3	86	48.108	Mesocricetus_auratus
ENSCJAG00000012524	APOBEC3H	89	50.562	ENSMOCG00000021576	Apobec3	78	51.124	Microtus_ochrogaster
ENSCJAG00000012524	APOBEC3H	90	48.227	MGP_CAROLIEiJ_G0020029	Apobec3	98	38.095	Mus_caroli
ENSCJAG00000012524	APOBEC3H	99	49.359	ENSMUSG00000009585	Apobec3	99	46.465	Mus_musculus
ENSCJAG00000012524	APOBEC3H	91	45.833	MGP_PahariEiJ_G0020031	-	86	45.699	Mus_pahari
ENSCJAG00000012524	APOBEC3H	89	48.201	MGP_SPRETEiJ_G0020927	Apobec3	98	39.286	Mus_spretus
ENSCJAG00000012524	APOBEC3H	91	49.275	ENSMPUG00000013239	-	85	50.000	Mustela_putorius_furo
ENSCJAG00000012524	APOBEC3H	92	48.905	ENSNGAG00000018998	Apobec3	87	49.438	Nannospalax_galili
ENSCJAG00000012524	APOBEC3H	91	69.286	ENSNLEG00000015218	-	86	70.166	Nomascus_leucogenys
ENSCJAG00000012524	APOBEC3H	91	41.429	ENSOCUG00000023913	-	83	42.135	Oryctolagus_cuniculus
ENSCJAG00000012524	APOBEC3H	90	49.444	ENSOARG00000016290	APOBEC3F	92	49.444	Ovis_aries
ENSCJAG00000012524	APOBEC3H	100	70.130	ENSPPAG00000036522	APOBEC3H	100	72.078	Pan_paniscus
ENSCJAG00000012524	APOBEC3H	89	35.000	ENSPPRG00000003675	-	82	36.538	Panthera_pardus
ENSCJAG00000012524	APOBEC3H	91	51.064	ENSPPRG00000003941	-	91	51.934	Panthera_pardus
ENSCJAG00000012524	APOBEC3H	91	51.064	ENSPTIG00000010283	-	91	51.934	Panthera_tigris_altaica
ENSCJAG00000012524	APOBEC3H	100	70.130	ENSPTRG00000014390	APOBEC3H	100	72.078	Pan_troglodytes
ENSCJAG00000012524	APOBEC3H	99	73.026	ENSPANG00000010774	APOBEC3H	99	73.026	Papio_anubis
ENSCJAG00000012524	APOBEC3H	90	48.571	ENSPEMG00000000456	Apobec3	79	46.703	Peromyscus_maniculatus_bairdii
ENSCJAG00000012524	APOBEC3H	90	70.166	ENSPPYG00000011834	-	86	70.166	Pongo_abelii
ENSCJAG00000012524	APOBEC3H	89	43.182	ENSPCAG00000015655	-	98	43.182	Procavia_capensis
ENSCJAG00000012524	APOBEC3H	65	34.646	ENSPVAG00000024161	-	93	34.646	Pteropus_vampyrus
ENSCJAG00000012524	APOBEC3H	58	36.782	ENSPVAG00000024267	-	77	39.216	Pteropus_vampyrus
ENSCJAG00000012524	APOBEC3H	89	52.174	ENSPVAG00000009462	-	98	51.685	Pteropus_vampyrus
ENSCJAG00000012524	APOBEC3H	91	46.853	ENSRNOG00000016852	Apobec3	86	45.946	Rattus_norvegicus
ENSCJAG00000012524	APOBEC3H	100	74.000	ENSRBIG00000029088	APOBEC3H	100	74.000	Rhinopithecus_bieti
ENSCJAG00000012524	APOBEC3H	100	74.000	ENSRROG00000024699	APOBEC3H	100	74.000	Rhinopithecus_roxellana
ENSCJAG00000012524	APOBEC3H	91	83.152	ENSSBOG00000030005	APOBEC3H	100	83.607	Saimiri_boliviensis_boliviensis
ENSCJAG00000012524	APOBEC3H	98	47.857	ENSSSCG00000000091	APOBEC3B	85	45.918	Sus_scrofa
ENSCJAG00000012524	APOBEC3H	85	51.515	ENSTBEG00000001532	-	98	49.419	Tupaia_belangeri
ENSCJAG00000012524	APOBEC3H	90	50.556	ENSTTRG00000001266	-	99	50.556	Tursiops_truncatus
ENSCJAG00000012524	APOBEC3H	91	49.660	ENSUAMG00000004427	-	83	48.663	Ursus_americanus
ENSCJAG00000012524	APOBEC3H	91	52.143	ENSUMAG00000014435	-	91	50.556	Ursus_maritimus
ENSCJAG00000012524	APOBEC3H	66	55.039	ENSVPAG00000011108	-	97	55.039	Vicugna_pacos