EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCJAG00000012565 (Gene tree)
Gene ID
100390037
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Callithrix_jacchus
Status
putative
Strand
Plus strand
Length
23007 bases
Position
chrNTIC01036611.1:6138636-6161642
Accession
100390037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCJAP00000023153CSDPF00313.222.2e-8415
ENSCJAP00000023153CSDPF00313.222.2e-8425
ENSCJAP00000023153CSDPF00313.222.2e-8435
ENSCJAP00000023153CSDPF00313.222.2e-8445
ENSCJAP00000023153CSDPF00313.222.2e-8455
ENSCJAP00000064257CSDPF00313.222.8e-8415
ENSCJAP00000064257CSDPF00313.222.8e-8425
ENSCJAP00000064257CSDPF00313.222.8e-8435
ENSCJAP00000064257CSDPF00313.222.8e-8445
ENSCJAP00000064257CSDPF00313.222.8e-8455
ENSCJAP00000059006CSDPF00313.222.5e-3712
ENSCJAP00000059006CSDPF00313.222.5e-3722
ENSCJAP00000052732CSDPF00313.221.4e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCJAT00000071450CSDE1-2041269-ENSCJAP00000059006422 (aa)-A0A2R8MG20
ENSCJAT00000085649CSDE1-2012535-ENSCJAP00000064257844 (aa)XP_017830533A0A2R8MS41
ENSCJAT00000077578CSDE1-203309-ENSCJAP00000052732102 (aa)-A0A2R8M2N1
ENSCJAT00000024495CSDE1-2022442-ENSCJAP00000023153813 (aa)-F7HZG2
Gene Model
Click here to download ENSCJAG00000012565's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012565's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCJAG00000012565CSDE110099.763ENSG00000009307CSDE1100100.000Homo_sapiens
ENSCJAG00000012565CSDE19873.944ENSAPOG00000015538csde110077.532Acanthochromis_polyacanthus
ENSCJAG00000012565CSDE110097.543ENSAMEG00000017129CSDE110097.543Ailuropoda_melanoleuca
ENSCJAG00000012565CSDE18676.486ENSACIG00000015175csde110076.486Amphilophus_citrinellus
ENSCJAG00000012565CSDE16677.612ENSACIG00000015225-8177.612Amphilophus_citrinellus
ENSCJAG00000012565CSDE19973.898ENSAOCG00000011510csde110077.662Amphiprion_ocellaris
ENSCJAG00000012565CSDE19975.563ENSAPEG00000007194csde110077.662Amphiprion_percula
ENSCJAG00000012565CSDE19477.273ENSATEG00000003864csde110077.273Anabas_testudineus
ENSCJAG00000012565CSDE19492.047ENSAPLG00000008797CSDE110092.047Anas_platyrhynchos
ENSCJAG00000012565CSDE19592.356ENSACAG00000003120CSDE110092.356Anolis_carolinensis
ENSCJAG00000012565CSDE1100100.000ENSANAG00000024665CSDE1100100.000Aotus_nancymaae
ENSCJAG00000012565CSDE18773.759ENSANAG00000028396-9174.490Aotus_nancymaae
ENSCJAG00000012565CSDE19576.875ENSACLG00000013296csde110077.243Astatotilapia_calliptera
ENSCJAG00000012565CSDE19477.043ENSAMXG00000007436csde110077.043Astyanax_mexicanus
ENSCJAG00000012565CSDE110098.578ENSBTAG00000000678CSDE110098.578Bos_taurus
ENSCJAG00000012565CSDE19898.997ENSCAFG00000009618CSDE110098.997Canis_familiaris
ENSCJAG00000012565CSDE19499.087ENSCAFG00020000481CSDE110099.087Canis_lupus_dingo
ENSCJAG00000012565CSDE110098.460ENSCHIG00000017250CSDE110098.566Capra_hircus
ENSCJAG00000012565CSDE110097.749ENSTSYG00000003747CSDE110098.864Carlito_syrichta
ENSCJAG00000012565CSDE19591.228ENSCAPG00000015128CSDE110091.228Cavia_aperea
ENSCJAG00000012565CSDE19795.098ENSCPOG00000040388CSDE110093.358Cavia_porcellus
ENSCJAG00000012565CSDE1100100.000ENSCCAG00000036794CSDE1100100.000Cebus_capucinus
ENSCJAG00000012565CSDE19076.733ENSCCAG00000033677-9976.010Cebus_capucinus
ENSCJAG00000012565CSDE19372.589ENSCCAG00000030878-9174.165Cebus_capucinus
ENSCJAG00000012565CSDE110099.763ENSCATG00000036962CSDE110099.763Cercocebus_atys
ENSCJAG00000012565CSDE19598.496ENSCLAG00000006618CSDE110098.496Chinchilla_lanigera
ENSCJAG00000012565CSDE110099.763ENSCSAG00000001658CSDE110099.763Chlorocebus_sabaeus
ENSCJAG00000012565CSDE110099.080ENSCHOG00000000918CSDE19199.080Choloepus_hoffmanni
ENSCJAG00000012565CSDE19592.732ENSCPBG00000016547CSDE110092.732Chrysemys_picta_bellii
ENSCJAG00000012565CSDE19242.857ENSCING00000014465-9642.857Ciona_intestinalis
ENSCJAG00000012565CSDE19142.503ENSCSAVG00000008100-9842.255Ciona_savignyi
ENSCJAG00000012565CSDE110099.645ENSCANG00000035096CSDE110099.645Colobus_angolensis_palliatus
ENSCJAG00000012565CSDE19490.146ENSCANG00000031069-9993.738Colobus_angolensis_palliatus
ENSCJAG00000012565CSDE19598.371ENSCGRG00001016833-10098.371Cricetulus_griseus_chok1gshd
ENSCJAG00000012565CSDE19481.226ENSCGRG00001014011-10081.226Cricetulus_griseus_chok1gshd
ENSCJAG00000012565CSDE19497.722ENSCGRG00000002225-10097.996Cricetulus_griseus_crigri
ENSCJAG00000012565CSDE19484.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSCJAG00000012565CSDE19477.113ENSCSEG00000002620csde110077.113Cynoglossus_semilaevis
ENSCJAG00000012565CSDE19875.209ENSCVAG00000001344csde110076.623Cyprinodon_variegatus
ENSCJAG00000012565CSDE19974.335ENSDARG00000074758csde110077.857Danio_rerio
ENSCJAG00000012565CSDE16483.077ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSCJAG00000012565CSDE19597.927ENSDNOG00000010287-9497.927Dasypus_novemcinctus
ENSCJAG00000012565CSDE19597.870ENSDORG00000011609Csde110098.054Dipodomys_ordii
ENSCJAG00000012565CSDE19345.725FBgn0263352Unr7347.992Drosophila_melanogaster
ENSCJAG00000012565CSDE19477.285ENSETEG00000013678-9977.285Echinops_telfairi
ENSCJAG00000012565CSDE19467.089ENSETEG00000007109-9968.543Echinops_telfairi
ENSCJAG00000012565CSDE18587.342ENSETEG00000006280-10087.342Echinops_telfairi
ENSCJAG00000012565CSDE19398.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSCJAG00000012565CSDE19456.020ENSEBUG00000008647csde19954.286Eptatretus_burgeri
ENSCJAG00000012565CSDE110098.032ENSEASG00005006284CSDE110098.872Equus_asinus_asinus
ENSCJAG00000012565CSDE110098.032ENSECAG00000020885CSDE110098.872Equus_caballus
ENSCJAG00000012565CSDE19398.953ENSEEUG00000006286CSDE17498.953Erinaceus_europaeus
ENSCJAG00000012565CSDE19872.506ENSELUG00000015507csde110075.679Esox_lucius
ENSCJAG00000012565CSDE110099.052ENSFCAG00000029266CSDE110099.087Felis_catus
ENSCJAG00000012565CSDE19592.105ENSFALG00000003407CSDE110092.105Ficedula_albicollis
ENSCJAG00000012565CSDE19598.747ENSFDAG00000007882CSDE110098.952Fukomys_damarensis
ENSCJAG00000012565CSDE19875.000ENSFHEG00000010799csde110076.654Fundulus_heteroclitus
ENSCJAG00000012565CSDE19476.721ENSGMOG00000012731csde110076.721Gadus_morhua
ENSCJAG00000012565CSDE19392.327ENSGALG00000002139CSDE19892.327Gallus_gallus
ENSCJAG00000012565CSDE18776.220ENSGAFG00000005241csde19576.220Gambusia_affinis
ENSCJAG00000012565CSDE19477.500ENSGACG00000004544csde110077.500Gasterosteus_aculeatus
ENSCJAG00000012565CSDE110090.769ENSGAGG00000017685CSDE110092.356Gopherus_agassizii
ENSCJAG00000012565CSDE110099.763ENSGGOG00000002164CSDE110099.763Gorilla_gorilla
ENSCJAG00000012565CSDE19975.030ENSHBUG00000020315csde110077.243Haplochromis_burtoni
ENSCJAG00000012565CSDE19582.331ENSHGLG00000019549-10082.331Heterocephalus_glaber_female
ENSCJAG00000012565CSDE19480.050ENSHGLG00000000650-9980.050Heterocephalus_glaber_female
ENSCJAG00000012565CSDE19490.886ENSHGLG00000008555-10089.222Heterocephalus_glaber_female
ENSCJAG00000012565CSDE19485.283ENSHGLG00000007471-9885.283Heterocephalus_glaber_female
ENSCJAG00000012565CSDE19786.520ENSHGLG00000010039-10089.532Heterocephalus_glaber_female
ENSCJAG00000012565CSDE19489.048ENSHGLG00000003829-10089.048Heterocephalus_glaber_female
ENSCJAG00000012565CSDE19589.474ENSHGLG00000009620-10089.724Heterocephalus_glaber_female
ENSCJAG00000012565CSDE19484.557ENSHGLG00100012072-10084.224Heterocephalus_glaber_male
ENSCJAG00000012565CSDE18883.821ENSHGLG00100004195-10083.821Heterocephalus_glaber_male
ENSCJAG00000012565CSDE19778.922ENSHGLG00100004833-10081.960Heterocephalus_glaber_male
ENSCJAG00000012565CSDE19482.654ENSHGLG00100007287-9882.654Heterocephalus_glaber_male
ENSCJAG00000012565CSDE19786.275ENSHGLG00100006910-10089.310Heterocephalus_glaber_male
ENSCJAG00000012565CSDE19484.355ENSHGLG00100002245-9984.355Heterocephalus_glaber_male
ENSCJAG00000012565CSDE19598.997ENSHGLG00100019438-10098.997Heterocephalus_glaber_male
ENSCJAG00000012565CSDE19482.025ENSHGLG00100001846-10080.208Heterocephalus_glaber_male
ENSCJAG00000012565CSDE19875.271ENSHCOG00000004158csde110076.203Hippocampus_comes
ENSCJAG00000012565CSDE19476.783ENSIPUG00000000355csde110076.783Ictalurus_punctatus
ENSCJAG00000012565CSDE19284.319ENSSTOG00000030994-10080.179Ictidomys_tridecemlineatus
ENSCJAG00000012565CSDE17992.308ENSSTOG00000032722-9492.308Ictidomys_tridecemlineatus
ENSCJAG00000012565CSDE19598.120ENSJJAG00000019571Csde110098.204Jaculus_jaculus
ENSCJAG00000012565CSDE19975.059ENSKMAG00000005685csde110076.143Kryptolebias_marmoratus
ENSCJAG00000012565CSDE19873.944ENSLBEG00000014770csde110077.532Labrus_bergylta
ENSCJAG00000012565CSDE19778.960ENSLACG00000018452CSDE19679.172Latimeria_chalumnae
ENSCJAG00000012565CSDE110077.817ENSLOCG00000010413csde19679.951Lepisosteus_oculatus
ENSCJAG00000012565CSDE19597.147ENSLAFG00000007150CSDE19697.147Loxodonta_africana
ENSCJAG00000012565CSDE110099.763ENSMFAG00000003674CSDE110099.763Macaca_fascicularis
ENSCJAG00000012565CSDE110099.763ENSMMUG00000001974CSDE110099.763Macaca_mulatta
ENSCJAG00000012565CSDE110099.763ENSMNEG00000045247CSDE110099.763Macaca_nemestrina
ENSCJAG00000012565CSDE110099.526ENSMLEG00000038673CSDE110099.526Mandrillus_leucophaeus
ENSCJAG00000012565CSDE19973.739ENSMAMG00000008821csde110078.182Mastacembelus_armatus
ENSCJAG00000012565CSDE19975.627ENSMZEG00005021675csde110077.243Maylandia_zebra
ENSCJAG00000012565CSDE19491.797ENSMGAG00000016381CSDE110091.797Meleagris_gallopavo
ENSCJAG00000012565CSDE19598.371ENSMAUG00000014031Csde110098.503Mesocricetus_auratus
ENSCJAG00000012565CSDE110098.155ENSMICG00000002050CSDE110098.155Microcebus_murinus
ENSCJAG00000012565CSDE19598.371ENSMOCG00000018960Csde110098.371Microtus_ochrogaster
ENSCJAG00000012565CSDE19477.532ENSMMOG00000015075csde110077.532Mola_mola
ENSCJAG00000012565CSDE19596.115ENSMODG00000004685CSDE110096.115Monodelphis_domestica
ENSCJAG00000012565CSDE19477.662ENSMALG00000007132csde110077.662Monopterus_albus
ENSCJAG00000012565CSDE19598.120MGP_CAROLIEiJ_G0025444Csde110098.675Mus_caroli
ENSCJAG00000012565CSDE19598.246ENSMUSG00000068823Csde110098.675Mus_musculus
ENSCJAG00000012565CSDE19598.496MGP_PahariEiJ_G0026888Csde110098.675Mus_pahari
ENSCJAG00000012565CSDE19598.496MGP_SPRETEiJ_G0026394Csde110098.675Mus_spretus
ENSCJAG00000012565CSDE19399.106ENSMPUG00000005753CSDE19999.106Mustela_putorius_furo
ENSCJAG00000012565CSDE110097.909ENSMLUG00000005681CSDE110097.909Myotis_lucifugus
ENSCJAG00000012565CSDE19598.496ENSNGAG00000021929Csde110098.653Nannospalax_galili
ENSCJAG00000012565CSDE19077.428ENSNGAG00000012599-10071.047Nannospalax_galili
ENSCJAG00000012565CSDE19477.243ENSNBRG00000020808csde110077.243Neolamprologus_brichardi
ENSCJAG00000012565CSDE110099.645ENSNLEG00000004842CSDE110099.645Nomascus_leucogenys
ENSCJAG00000012565CSDE19396.117ENSMEUG00000002677CSDE19696.117Notamacropus_eugenii
ENSCJAG00000012565CSDE19896.644ENSOPRG00000005002CSDE18893.849Ochotona_princeps
ENSCJAG00000012565CSDE19465.063ENSODEG00000005979-9867.478Octodon_degus
ENSCJAG00000012565CSDE19598.622ENSODEG00000007383-10098.653Octodon_degus
ENSCJAG00000012565CSDE19575.092ENSONIG00000009309csde110075.092Oreochromis_niloticus
ENSCJAG00000012565CSDE15173.636ENSOANG00000004518-10074.537Ornithorhynchus_anatinus
ENSCJAG00000012565CSDE19579.676ENSOANG00000003346-10079.676Ornithorhynchus_anatinus
ENSCJAG00000012565CSDE110097.867ENSOCUG00000016438CSDE110097.867Oryctolagus_cuniculus
ENSCJAG00000012565CSDE19477.373ENSORLG00000000707csde110077.373Oryzias_latipes
ENSCJAG00000012565CSDE19875.120ENSORLG00020005148csde110075.092Oryzias_latipes_hni
ENSCJAG00000012565CSDE19875.120ENSORLG00015019415csde110077.373Oryzias_latipes_hsok
ENSCJAG00000012565CSDE19875.630ENSOMEG00000015656csde110077.922Oryzias_melastigma
ENSCJAG00000012565CSDE110098.647ENSOGAG00000012127CSDE110098.647Otolemur_garnettii
ENSCJAG00000012565CSDE110098.524ENSOARG00000020034CSDE110098.524Ovis_aries
ENSCJAG00000012565CSDE110099.763ENSPPAG00000025861CSDE110099.763Pan_paniscus
ENSCJAG00000012565CSDE110099.052ENSPPRG00000006747CSDE110099.052Panthera_pardus
ENSCJAG00000012565CSDE110099.052ENSPTIG00000015468CSDE110099.123Panthera_tigris_altaica
ENSCJAG00000012565CSDE110099.645ENSPTRG00000033721CSDE110099.749Pan_troglodytes
ENSCJAG00000012565CSDE110099.763ENSPANG00000018873CSDE110099.763Papio_anubis
ENSCJAG00000012565CSDE19476.983ENSPKIG00000009459csde110076.983Paramormyrops_kingsleyae
ENSCJAG00000012565CSDE19195.354ENSPSIG00000003823CSDE19695.354Pelodiscus_sinensis
ENSCJAG00000012565CSDE19477.143ENSPMGG00000000772csde110077.143Periophthalmus_magnuspinnatus
ENSCJAG00000012565CSDE19598.371ENSPEMG00000020357-10098.503Peromyscus_maniculatus_bairdii
ENSCJAG00000012565CSDE110094.215ENSPCIG00000022587CSDE110096.241Phascolarctos_cinereus
ENSCJAG00000012565CSDE19475.155ENSPFOG00000012664csde110075.621Poecilia_formosa
ENSCJAG00000012565CSDE19271.121ENSPLAG00000017680csde19371.121Poecilia_latipinna
ENSCJAG00000012565CSDE18568.182ENSPLAG00000004786-8968.182Poecilia_latipinna
ENSCJAG00000012565CSDE19371.017ENSPMEG00000005094csde19671.017Poecilia_mexicana
ENSCJAG00000012565CSDE16679.104ENSPMEG00000000768-9776.812Poecilia_mexicana
ENSCJAG00000012565CSDE19874.614ENSPREG00000011631csde110073.830Poecilia_reticulata
ENSCJAG00000012565CSDE19599.624ENSPPYG00000000996CSDE110099.624Pongo_abelii
ENSCJAG00000012565CSDE110098.257ENSPCAG00000014368CSDE19698.257Procavia_capensis
ENSCJAG00000012565CSDE110098.769ENSPCOG00000017893CSDE110098.957Propithecus_coquereli
ENSCJAG00000012565CSDE18583.955ENSPCOG00000008223-9282.482Propithecus_coquereli
ENSCJAG00000012565CSDE110092.497ENSPVAG00000008225CSDE110092.497Pteropus_vampyrus
ENSCJAG00000012565CSDE19975.030ENSPNYG00000013745csde110077.243Pundamilia_nyererei
ENSCJAG00000012565CSDE19974.852ENSPNAG00000001958csde110077.403Pygocentrus_nattereri
ENSCJAG00000012565CSDE19598.371ENSRNOG00000061058Csde110098.371Rattus_norvegicus
ENSCJAG00000012565CSDE110094.356ENSRBIG00000038966-9998.824Rhinopithecus_bieti
ENSCJAG00000012565CSDE19794.608ENSRBIG00000038088-9997.926Rhinopithecus_bieti
ENSCJAG00000012565CSDE110099.763ENSRROG00000043101CSDE110099.763Rhinopithecus_roxellana
ENSCJAG00000012565CSDE1100100.000ENSSBOG00000035592CSDE1100100.000Saimiri_boliviensis_boliviensis
ENSCJAG00000012565CSDE110093.873ENSSHAG00000009831CSDE110095.958Sarcophilus_harrisii
ENSCJAG00000012565CSDE19875.449ENSSFOG00015007498csde110076.883Scleropages_formosus
ENSCJAG00000012565CSDE19974.562ENSSMAG00000007203csde110078.052Scophthalmus_maximus
ENSCJAG00000012565CSDE19873.944ENSSDUG00000015380csde110077.532Seriola_dumerili
ENSCJAG00000012565CSDE19876.145ENSSLDG00000008819csde110077.532Seriola_lalandi_dorsalis
ENSCJAG00000012565CSDE110096.683ENSSARG00000000738CSDE110096.683Sorex_araneus
ENSCJAG00000012565CSDE110090.888ENSSPUG00000008714CSDE110092.105Sphenodon_punctatus
ENSCJAG00000012565CSDE19975.682ENSSPAG00000000716csde110077.532Stegastes_partitus
ENSCJAG00000012565CSDE110098.934ENSSSCG00000006752CSDE110099.087Sus_scrofa
ENSCJAG00000012565CSDE19591.125ENSTGUG00000000972CSDE110091.125Taeniopygia_guttata
ENSCJAG00000012565CSDE19474.382ENSTRUG00000007996csde110074.382Takifugu_rubripes
ENSCJAG00000012565CSDE18881.369ENSTNIG00000010878csde110081.369Tetraodon_nigroviridis
ENSCJAG00000012565CSDE17998.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSCJAG00000012565CSDE110098.155ENSTTRG00000015583CSDE110098.155Tursiops_truncatus
ENSCJAG00000012565CSDE18494.525ENSUAMG00000024289-9994.525Ursus_americanus
ENSCJAG00000012565CSDE18499.349ENSUAMG00000021779-10098.714Ursus_americanus
ENSCJAG00000012565CSDE18482.022ENSUAMG00000021782-9782.022Ursus_americanus
ENSCJAG00000012565CSDE18482.022ENSUMAG00000011713-9782.022Ursus_maritimus
ENSCJAG00000012565CSDE19795.833ENSUMAG00000011714-9999.050Ursus_maritimus
ENSCJAG00000012565CSDE19889.070ENSUMAG00000009720-9891.180Ursus_maritimus
ENSCJAG00000012565CSDE110098.122ENSVPAG00000000749CSDE18598.122Vicugna_pacos
ENSCJAG00000012565CSDE18698.977ENSVVUG00000009890CSDE19498.977Vulpes_vulpes
ENSCJAG00000012565CSDE19585.893ENSXETG00000021448csde110085.893Xenopus_tropicalis
ENSCJAG00000012565CSDE18785.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSCJAG00000012565CSDE19975.621ENSXMAG00000009080csde19877.454Xiphophorus_maculatus

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