EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000012716 (Gene tree)
Gene ID: 100407061
Gene Symbol: ERCC2
Alias: EM9|MAG|MGC102762|MGC126218|MGC126219|TFIIH|XPD
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 21396 bases
Position: chrNTIC01011113.1:43079046-43100441
Accession: 3434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000023357	ResIII	PF04851.15	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000024672	ERCC2-203	1194	-	ENSCJAP00000023318	398 (aa)	-	F7IB49
ENSCJAT00000024712	ERCC2-202	2049	-	ENSCJAP00000023357	682 (aa)	-	F7I423
ENSCJAT00000024715	ERCC2-201	3793	-	ENSCJAP00000023359	760 (aa)	-	U3D1R7

Gene Model

Click here to download ENSCJAG00000012716's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03022	Basal transcription factors	KEGG
cjc03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000012716	ERCC2	80	37.931	ENSCJAG00000001292	BRIP1	64	37.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000012716	ERCC2	100	99.413	ENSG00000104884	ERCC2	100	99.413	Homo_sapiens
ENSCJAG00000012716	ERCC2	97	84.314	ENSAPOG00000000375	ercc2	99	84.314	Acanthochromis_polyacanthus
ENSCJAG00000012716	ERCC2	99	84.683	ENSACIG00000008002	ercc2	99	84.683	Amphilophus_citrinellus
ENSCJAG00000012716	ERCC2	97	82.883	ENSAOCG00000016153	ercc2	99	82.883	Amphiprion_ocellaris
ENSCJAG00000012716	ERCC2	97	82.883	ENSAPEG00000016712	ercc2	99	82.883	Amphiprion_percula
ENSCJAG00000012716	ERCC2	99	84.288	ENSATEG00000005268	ercc2	99	84.288	Anabas_testudineus
ENSCJAG00000012716	ERCC2	100	99.560	ENSANAG00000022694	ERCC2	100	99.560	Aotus_nancymaae
ENSCJAG00000012716	ERCC2	97	84.917	ENSACLG00000017573	ercc2	99	84.917	Astatotilapia_calliptera
ENSCJAG00000012716	ERCC2	97	84.639	ENSAMXG00000009052	ercc2	99	84.639	Astyanax_mexicanus
ENSCJAG00000012716	ERCC2	99	98.824	ENSCAFG00020011390	ERCC2	99	98.824	Canis_lupus_dingo
ENSCJAG00000012716	ERCC2	97	81.212	ENSTSYG00000026723	ERCC2	99	81.212	Carlito_syrichta
ENSCJAG00000012716	ERCC2	99	96.934	ENSCCAG00000019831	ERCC2	99	96.934	Cebus_capucinus
ENSCJAG00000012716	ERCC2	82	37.931	ENSCCAG00000024685	BRIP1	59	37.931	Cebus_capucinus
ENSCJAG00000012716	ERCC2	100	99.560	ENSCANG00000040683	ERCC2	100	99.560	Colobus_angolensis_palliatus
ENSCJAG00000012716	ERCC2	97	79.819	ENSCSEG00000006041	ercc2	99	79.819	Cynoglossus_semilaevis
ENSCJAG00000012716	ERCC2	99	95.588	ENSEASG00005013856	ERCC2	99	95.588	Equus_asinus_asinus
ENSCJAG00000012716	ERCC2	98	83.759	ENSELUG00000018055	ercc2	100	83.759	Esox_lucius
ENSCJAG00000012716	ERCC2	100	98.680	ENSFCAG00000002679	ERCC2	100	98.680	Felis_catus
ENSCJAG00000012716	ERCC2	99	84.265	ENSFHEG00000000072	ercc2	99	84.265	Fundulus_heteroclitus
ENSCJAG00000012716	ERCC2	100	84.050	ENSGAGG00000009493	ERCC2	100	84.050	Gopherus_agassizii
ENSCJAG00000012716	ERCC2	100	99.560	ENSGGOG00000015842	ERCC2	100	99.560	Gorilla_gorilla
ENSCJAG00000012716	ERCC2	97	84.108	ENSHBUG00000002187	ercc2	99	84.108	Haplochromis_burtoni
ENSCJAG00000012716	ERCC2	99	83.260	ENSLBEG00000010573	ercc2	92	83.382	Labrus_bergylta
ENSCJAG00000012716	ERCC2	100	99.560	ENSMFAG00000037898	ERCC2	100	99.560	Macaca_fascicularis
ENSCJAG00000012716	ERCC2	100	99.560	ENSMMUG00000014419	ERCC2	100	99.560	Macaca_mulatta
ENSCJAG00000012716	ERCC2	82	39.655	ENSMNEG00000040728	BRIP1	57	39.655	Macaca_nemestrina
ENSCJAG00000012716	ERCC2	100	99.560	ENSMNEG00000042641	ERCC2	100	99.560	Macaca_nemestrina
ENSCJAG00000012716	ERCC2	99	99.559	ENSMLEG00000043492	ERCC2	99	99.559	Mandrillus_leucophaeus
ENSCJAG00000012716	ERCC2	99	84.389	ENSMAMG00000016724	ercc2	99	84.389	Mastacembelus_armatus
ENSCJAG00000012716	ERCC2	97	84.940	ENSMZEG00005024441	ercc2	99	84.940	Maylandia_zebra
ENSCJAG00000012716	ERCC2	100	98.680	ENSMICG00000000635	ERCC2	100	98.680	Microcebus_murinus
ENSCJAG00000012716	ERCC2	99	81.296	ENSMMOG00000005162	ercc2	99	81.296	Mola_mola
ENSCJAG00000012716	ERCC2	99	83.358	ENSMALG00000005990	ercc2	99	83.358	Monopterus_albus
ENSCJAG00000012716	ERCC2	99	98.091	MGP_CAROLIEiJ_G0029287	Ercc2	99	98.091	Mus_caroli
ENSCJAG00000012716	ERCC2	99	98.091	ENSMUSG00000030400	Ercc2	99	98.091	Mus_musculus
ENSCJAG00000012716	ERCC2	99	98.091	MGP_PahariEiJ_G0021147	Ercc2	99	98.091	Mus_pahari
ENSCJAG00000012716	ERCC2	99	97.944	MGP_SPRETEiJ_G0030371	Ercc2	99	97.944	Mus_spretus
ENSCJAG00000012716	ERCC2	100	99.560	ENSPPAG00000044005	ERCC2	100	99.560	Pan_paniscus
ENSCJAG00000012716	ERCC2	99	93.676	ENSPPRG00000000507	ERCC2	99	93.676	Panthera_pardus
ENSCJAG00000012716	ERCC2	100	99.560	ENSPTRG00000011149	ERCC2	100	99.560	Pan_troglodytes
ENSCJAG00000012716	ERCC2	99	99.559	ENSPANG00000032195	ERCC2	99	99.559	Papio_anubis
ENSCJAG00000012716	ERCC2	99	79.736	ENSPKIG00000006883	ercc2	98	79.736	Paramormyrops_kingsleyae
ENSCJAG00000012716	ERCC2	97	83.735	ENSPMGG00000000223	ercc2	99	83.735	Periophthalmus_magnuspinnatus
ENSCJAG00000012716	ERCC2	99	84.141	ENSPLAG00000002626	ercc2	99	84.265	Poecilia_latipinna
ENSCJAG00000012716	ERCC2	99	84.141	ENSPMEG00000002858	ercc2	99	84.265	Poecilia_mexicana
ENSCJAG00000012716	ERCC2	99	79.589	ENSPREG00000019280	ercc2	99	79.706	Poecilia_reticulata
ENSCJAG00000012716	ERCC2	97	84.234	ENSPNYG00000022007	ercc2	99	84.234	Pundamilia_nyererei
ENSCJAG00000012716	ERCC2	98	84.060	ENSPNAG00000010434	ercc2	100	84.060	Pygocentrus_nattereri
ENSCJAG00000012716	ERCC2	100	99.560	ENSRROG00000040423	ERCC2	100	99.560	Rhinopithecus_roxellana
ENSCJAG00000012716	ERCC2	99	99.706	ENSSBOG00000030257	ERCC2	99	99.706	Saimiri_boliviensis_boliviensis
ENSCJAG00000012716	ERCC2	82	37.931	ENSSBOG00000035665	BRIP1	57	37.931	Saimiri_boliviensis_boliviensis
ENSCJAG00000012716	ERCC2	97	78.261	ENSSMAG00000019720	ercc2	99	78.261	Scophthalmus_maximus
ENSCJAG00000012716	ERCC2	97	83.735	ENSSDUG00000002397	ercc2	99	83.735	Seriola_dumerili
ENSCJAG00000012716	ERCC2	97	83.584	ENSSLDG00000020353	ercc2	99	83.584	Seriola_lalandi_dorsalis
ENSCJAG00000012716	ERCC2	99	84.536	ENSSPAG00000002074	ercc2	99	84.536	Stegastes_partitus
ENSCJAG00000012716	ERCC2	99	84.094	ENSTRUG00000007303	ercc2	99	84.094	Takifugu_rubripes
ENSCJAG00000012716	ERCC2	99	98.529	ENSUAMG00000019562	ERCC2	99	98.529	Ursus_americanus
ENSCJAG00000012716	ERCC2	99	79.883	ENSXMAG00000003922	ercc2	99	80.000	Xiphophorus_maculatus