EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCJAG00000012871 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Callithrix_jacchus
Status
putative
Strand
Minus strand
Length
5143 bases
Position
chrNTIC01004446.1:50993103-50998245
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCJAP00000064293RRM_1PF00076.223.3e-3112
ENSCJAP00000064293RRM_1PF00076.223.3e-3122
ENSCJAP00000057422RRM_1PF00076.223.7e-3112
ENSCJAP00000057422RRM_1PF00076.223.7e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCJAT00000024936-1173-ENSCJAP00000057422390 (aa)-A0A2R8MCL4
ENSCJAT00000083725-1131-ENSCJAP00000064293376 (aa)-A0A2R8MSE0
Gene Model
Click here to download ENSCJAG00000012871's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000012871's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCJAG00000012871-5140.789ENSCJAG00000020133CELF15140.789
ENSCJAG00000012871-9994.545ENSCJAG00000022465-10094.550
ENSCJAG00000012871-5339.474ENSCJAG00000020663CELF25139.474
ENSCJAG00000012871-9996.783ENSCJAG00000014861-9796.306
ENSCJAG00000012871-9270.185ENSCJAG00000004312RBMS39469.417
ENSCJAG00000012871-7473.519ENSCJAG00000038571-6870.794
ENSCJAG00000012871-5135.484ENSCJAG00000005589ELAVL36335.484
ENSCJAG00000012871-5134.328ENSCJAG00000013725ELAVL48233.333
ENSCJAG00000012871-5339.062ENSCJAG00000045282-9739.062
ENSCJAG00000012871-9370.000ENSCJAG00000010803RBMS29369.554
ENSCJAG00000012871-5335.814ENSCJAG00000008064ELAVL25434.653
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCJAG00000012871-9896.757ENSG00000153250RBMS110096.757Homo_sapiens
ENSCJAG00000012871-9264.058ENSAPOG00000013761rbms1a9561.333Acanthochromis_polyacanthus
ENSCJAG00000012871-9875.064ENSAPOG00000024437-9774.807Acanthochromis_polyacanthus
ENSCJAG00000012871-9993.899ENSAMEG00000012661RBMS19993.473Ailuropoda_melanoleuca
ENSCJAG00000012871-9257.681ENSACIG00000000113rbms1a9656.085Amphilophus_citrinellus
ENSCJAG00000012871-9975.132ENSACIG00000021498RBMS19575.132Amphilophus_citrinellus
ENSCJAG00000012871-9264.348ENSAOCG00000010066rbms1a9661.376Amphiprion_ocellaris
ENSCJAG00000012871-9976.064ENSAOCG00000014482-9775.258Amphiprion_ocellaris
ENSCJAG00000012871-9761.905ENSAPEG00000023563rbms1a9661.376Amphiprion_percula
ENSCJAG00000012871-9975.798ENSAPEG00000018371-9775.000Amphiprion_percula
ENSCJAG00000012871-9973.810ENSATEG00000018573RBMS19873.333Anabas_testudineus
ENSCJAG00000012871-9264.348ENSATEG00000015450rbms1a9661.376Anabas_testudineus
ENSCJAG00000012871-9990.349ENSAPLG00000007282RBMS19690.212Anas_platyrhynchos
ENSCJAG00000012871-9989.418ENSACAG00000011984RBMS18089.175Anolis_carolinensis
ENSCJAG00000012871-8596.894ENSANAG00000024424RBMS110096.894Aotus_nancymaae
ENSCJAG00000012871-9973.810ENSACLG00000013048RBMS19773.127Astatotilapia_calliptera
ENSCJAG00000012871-9263.768ENSACLG00000021512rbms1a9661.111Astatotilapia_calliptera
ENSCJAG00000012871-9871.907ENSAMXG00000002146rbms1a9771.649Astyanax_mexicanus
ENSCJAG00000012871-9975.066ENSAMXG00000009969RBMS110074.866Astyanax_mexicanus
ENSCJAG00000012871-9994.415ENSBTAG00000005180RBMS19694.057Bos_taurus
ENSCJAG00000012871-9994.681ENSCAFG00000009922RBMS19694.315Canis_familiaris
ENSCJAG00000012871-9995.442ENSCAFG00020006120RBMS19991.521Canis_lupus_dingo
ENSCJAG00000012871-9995.174ENSCHIG00000023380RBMS19991.272Capra_hircus
ENSCJAG00000012871-9995.479ENSTSYG00000005584RBMS110096.486Carlito_syrichta
ENSCJAG00000012871-9995.710ENSCPOG00000012310RBMS110091.624Cavia_porcellus
ENSCJAG00000012871-9996.011ENSCCAG00000033841RBMS19995.550Cebus_capucinus
ENSCJAG00000012871-9995.479ENSCATG00000043032RBMS110096.486Cercocebus_atys
ENSCJAG00000012871-9995.442ENSCLAG00000003031RBMS110091.710Chinchilla_lanigera
ENSCJAG00000012871-9995.479ENSCSAG00000015687RBMS19991.584Chlorocebus_sabaeus
ENSCJAG00000012871-5293.023ENSCHOG00000001579RBMS17393.023Choloepus_hoffmanni
ENSCJAG00000012871-9991.223ENSCPBG00000026455RBMS19690.439Chrysemys_picta_bellii
ENSCJAG00000012871-9995.479ENSCANG00000042152RBMS110096.486Colobus_angolensis_palliatus
ENSCJAG00000012871-9994.638ENSCGRG00001022833Rbms19990.773Cricetulus_griseus_chok1gshd
ENSCJAG00000012871-9994.638ENSCGRG00000008824Rbms110090.609Cricetulus_griseus_crigri
ENSCJAG00000012871-9262.319ENSCSEG00000000889rbms1a9560.533Cynoglossus_semilaevis
ENSCJAG00000012871-9971.958ENSCSEG00000010652RBMS110070.933Cynoglossus_semilaevis
ENSCJAG00000012871-9263.478ENSCVAG00000014698rbms1a9660.582Cyprinodon_variegatus
ENSCJAG00000012871-9972.074ENSCVAG00000002027RBMS110071.582Cyprinodon_variegatus
ENSCJAG00000012871-9871.318ENSDARG00000074023rbms1a9671.059Danio_rerio
ENSCJAG00000012871-9390.489ENSDNOG00000040691RBMS110090.746Dasypus_novemcinctus
ENSCJAG00000012871-9995.442ENSDORG00000007103Rbms110091.710Dipodomys_ordii
ENSCJAG00000012871-9982.713ENSETEG00000012135RBMS110082.677Echinops_telfairi
ENSCJAG00000012871-9994.415ENSEASG00005023132RBMS19694.057Equus_asinus_asinus
ENSCJAG00000012871-9994.415ENSECAG00000019894RBMS19990.594Equus_caballus
ENSCJAG00000012871-7791.781ENSEEUG00000005628RBMS17291.781Erinaceus_europaeus
ENSCJAG00000012871-9968.351ENSELUG00000019328RBMS19368.338Esox_lucius
ENSCJAG00000012871-9865.241ENSELUG00000018923rbms1a9966.307Esox_lucius
ENSCJAG00000012871-9994.149ENSFCAG00000012524RBMS110095.135Felis_catus
ENSCJAG00000012871-9390.544ENSFALG00000004440RBMS110090.811Ficedula_albicollis
ENSCJAG00000012871-9995.710ENSFDAG00000015692RBMS110091.624Fukomys_damarensis
ENSCJAG00000012871-9263.768ENSFHEG00000005662rbms1a9172.251Fundulus_heteroclitus
ENSCJAG00000012871-9971.809ENSFHEG00000000720RBMS19772.165Fundulus_heteroclitus
ENSCJAG00000012871-8861.808ENSGMOG00000000525rbms1a9961.127Gadus_morhua
ENSCJAG00000012871-9990.617ENSGALG00000011132RBMS110090.811Gallus_gallus
ENSCJAG00000012871-9972.074ENSGAFG00000007708RBMS19772.423Gambusia_affinis
ENSCJAG00000012871-9759.836ENSGAFG00000011633rbms1a9961.644Gambusia_affinis
ENSCJAG00000012871-9872.680ENSGACG00000005671RBMS19772.423Gasterosteus_aculeatus
ENSCJAG00000012871-9659.309ENSGACG00000015174rbms1a9563.372Gasterosteus_aculeatus
ENSCJAG00000012871-9990.957ENSGAGG00000007866RBMS19690.181Gopherus_agassizii
ENSCJAG00000012871-9896.757ENSGGOG00000001264RBMS110096.757Gorilla_gorilla
ENSCJAG00000012871-9993.085ENSGGOG00000043756-9693.023Gorilla_gorilla
ENSCJAG00000012871-9263.768ENSHBUG00000004802rbms1a9661.111Haplochromis_burtoni
ENSCJAG00000012871-9376.487ENSHBUG00000004516RBMS19876.437Haplochromis_burtoni
ENSCJAG00000012871-9995.430ENSHGLG00000010387RBMS110090.863Heterocephalus_glaber_female
ENSCJAG00000012871-9995.430ENSHGLG00100014105RBMS110090.863Heterocephalus_glaber_male
ENSCJAG00000012871-9971.958ENSHCOG00000016668RBMS19771.134Hippocampus_comes
ENSCJAG00000012871-9262.319ENSHCOG00000020097rbms1a9958.333Hippocampus_comes
ENSCJAG00000012871-9871.465ENSIPUG00000010131RBMS19771.208Ictalurus_punctatus
ENSCJAG00000012871-9976.596ENSIPUG00000014677RBMS19775.907Ictalurus_punctatus
ENSCJAG00000012871-9995.442ENSSTOG00000012501RBMS110091.371Ictidomys_tridecemlineatus
ENSCJAG00000012871-9995.174ENSJJAG00000016543Rbms110091.451Jaculus_jaculus
ENSCJAG00000012871-9975.532ENSKMAG00000013911RBMS19775.258Kryptolebias_marmoratus
ENSCJAG00000012871-9262.717ENSKMAG00000011839-9958.442Kryptolebias_marmoratus
ENSCJAG00000012871-9975.397ENSLBEG00000005787RBMS19774.742Labrus_bergylta
ENSCJAG00000012871-9264.058ENSLBEG00000025962rbms1a9661.111Labrus_bergylta
ENSCJAG00000012871-9980.000ENSLACG00000004324RBMS19678.571Latimeria_chalumnae
ENSCJAG00000012871-9983.245ENSLOCG00000008622rbms1a9782.216Lepisosteus_oculatus
ENSCJAG00000012871-9995.442ENSLAFG00000017217RBMS110094.987Loxodonta_africana
ENSCJAG00000012871-9995.479ENSMFAG00000000274RBMS110096.486Macaca_fascicularis
ENSCJAG00000012871-9995.479ENSMMUG00000016825RBMS110095.052Macaca_mulatta
ENSCJAG00000012871-9995.479ENSMNEG00000039425RBMS110096.486Macaca_nemestrina
ENSCJAG00000012871-9995.213ENSMLEG00000031517RBMS110096.216Mandrillus_leucophaeus
ENSCJAG00000012871-9261.739ENSMAMG00000005018rbms1a9658.995Mastacembelus_armatus
ENSCJAG00000012871-9871.907ENSMAMG00000003159-9873.138Mastacembelus_armatus
ENSCJAG00000012871-8675.610ENSMZEG00005007313RBMS19775.862Maylandia_zebra
ENSCJAG00000012871-9263.768ENSMZEG00005005661rbms1a9661.111Maylandia_zebra
ENSCJAG00000012871-9389.773ENSMGAG00000011054RBMS110090.080Meleagris_gallopavo
ENSCJAG00000012871-9994.102ENSMAUG00000008550Rbms19990.274Mesocricetus_auratus
ENSCJAG00000012871-9994.415ENSMICG00000008325RBMS110093.979Microcebus_murinus
ENSCJAG00000012871-9993.834ENSMOCG00000022617Rbms110090.155Microtus_ochrogaster
ENSCJAG00000012871-9974.400ENSMMOG00000003707RBMS19773.711Mola_mola
ENSCJAG00000012871-7967.559ENSMMOG00000018249rbms1a8863.855Mola_mola
ENSCJAG00000012871-9991.421ENSMODG00000005250RBMS19987.781Monodelphis_domestica
ENSCJAG00000012871-9263.768ENSMALG00000014235rbms1a9660.847Monopterus_albus
ENSCJAG00000012871-9473.098ENSMALG00000015715-9671.948Monopterus_albus
ENSCJAG00000012871-9993.566MGP_CAROLIEiJ_G0023586Rbms110089.896Mus_caroli
ENSCJAG00000012871-9993.566ENSMUSG00000026970Rbms110089.896Mus_musculus
ENSCJAG00000012871-9993.298MGP_PahariEiJ_G0025037Rbms19692.969Mus_pahari
ENSCJAG00000012871-9993.834MGP_SPRETEiJ_G0024508Rbms110090.155Mus_spretus
ENSCJAG00000012871-9991.517ENSMPUG00000000539RBMS19988.010Mustela_putorius_furo
ENSCJAG00000012871-9990.281ENSMLUG00000008762RBMS19589.924Myotis_lucifugus
ENSCJAG00000012871-9995.174ENSNGAG00000013636Rbms19991.272Nannospalax_galili
ENSCJAG00000012871-9370.538ENSNBRG00000015151RBMS110071.046Neolamprologus_brichardi
ENSCJAG00000012871-8165.677ENSNBRG00000020217rbms1a9262.500Neolamprologus_brichardi
ENSCJAG00000012871-9896.757ENSNLEG00000001667RBMS110096.757Nomascus_leucogenys
ENSCJAG00000012871-8577.950ENSMEUG00000000746RBMS110077.950Notamacropus_eugenii
ENSCJAG00000012871-9987.500ENSOPRG00000012431RBMS19984.158Ochotona_princeps
ENSCJAG00000012871-9995.442ENSODEG00000013934RBMS110091.710Octodon_degus
ENSCJAG00000012871-9974.339ENSONIG00000008934RBMS19773.643Oreochromis_niloticus
ENSCJAG00000012871-9264.058ENSONIG00000003329rbms1a9661.842Oreochromis_niloticus
ENSCJAG00000012871-5756.846ENSOANG00000004477-9957.083Ornithorhynchus_anatinus
ENSCJAG00000012871-9990.691ENSOANG00000006166RBMS19690.551Ornithorhynchus_anatinus
ENSCJAG00000012871-9994.906ENSOCUG00000017365RBMS18994.459Oryctolagus_cuniculus
ENSCJAG00000012871-9471.508ENSORLG00000016818RBMS19669.666Oryzias_latipes
ENSCJAG00000012871-9261.739ENSORLG00000003917rbms1a9659.200Oryzias_latipes
ENSCJAG00000012871-9471.229ENSORLG00020022335RBMS19669.409Oryzias_latipes_hni
ENSCJAG00000012871-9261.449ENSORLG00020018663rbms1a9659.733Oryzias_latipes_hni
ENSCJAG00000012871-9261.739ENSORLG00015016556rbms1a9659.200Oryzias_latipes_hsok
ENSCJAG00000012871-9471.788ENSORLG00015018208RBMS19669.923Oryzias_latipes_hsok
ENSCJAG00000012871-9571.191ENSOMEG00000002394RBMS19670.876Oryzias_melastigma
ENSCJAG00000012871-9394.350ENSOGAG00000002900RBMS110094.400Otolemur_garnettii
ENSCJAG00000012871-9995.174ENSOARG00000006870RBMS110090.979Ovis_aries
ENSCJAG00000012871-9992.021ENSPPAG00000036520-9992.021Pan_paniscus
ENSCJAG00000012871-9995.745ENSPPAG00000040083RBMS110095.288Pan_paniscus
ENSCJAG00000012871-9994.149ENSPPRG00000005040RBMS110095.135Panthera_pardus
ENSCJAG00000012871-9994.149ENSPTIG00000021240RBMS110095.135Panthera_tigris_altaica
ENSCJAG00000012871-9992.553ENSPTRG00000039358-9992.147Pan_troglodytes
ENSCJAG00000012871-9995.745ENSPTRG00000052304RBMS110095.288Pan_troglodytes
ENSCJAG00000012871-9996.247ENSPANG00000001383RBMS110095.052Papio_anubis
ENSCJAG00000012871-9976.720ENSPKIG00000001498rbms1a9775.385Paramormyrops_kingsleyae
ENSCJAG00000012871-9873.834ENSPKIG00000012818rbms1a9774.677Paramormyrops_kingsleyae
ENSCJAG00000012871-9992.225ENSPSIG00000010240RBMS19988.030Pelodiscus_sinensis
ENSCJAG00000012871-9260.116ENSPMGG00000004341rbms1a9658.047Periophthalmus_magnuspinnatus
ENSCJAG00000012871-9271.839ENSPMGG00000006310RBMS110065.684Periophthalmus_magnuspinnatus
ENSCJAG00000012871-9994.906ENSPEMG00000009449Rbms19793.963Peromyscus_maniculatus_bairdii
ENSCJAG00000012871-9991.421ENSPCIG00000018405RBMS19690.885Phascolarctos_cinereus
ENSCJAG00000012871-9973.670ENSPFOG00000017483RBMS19773.196Poecilia_formosa
ENSCJAG00000012871-9263.768ENSPFOG00000016116rbms1a9660.847Poecilia_formosa
ENSCJAG00000012871-9263.768ENSPLAG00000013864rbms1a9660.847Poecilia_latipinna
ENSCJAG00000012871-9972.340ENSPLAG00000000920RBMS19772.938Poecilia_latipinna
ENSCJAG00000012871-9263.768ENSPMEG00000016185rbms1a9660.847Poecilia_mexicana
ENSCJAG00000012871-9973.670ENSPMEG00000015838RBMS19773.196Poecilia_mexicana
ENSCJAG00000012871-9973.670ENSPREG00000008146RBMS19773.196Poecilia_reticulata
ENSCJAG00000012871-9263.768ENSPREG00000020161rbms1a9660.847Poecilia_reticulata
ENSCJAG00000012871-9991.582ENSPPYG00000012879-9988.095Pongo_abelii
ENSCJAG00000012871-9987.766ENSPCAG00000009673RBMS19984.406Procavia_capensis
ENSCJAG00000012871-9994.681ENSPCOG00000027294RBMS110095.676Propithecus_coquereli
ENSCJAG00000012871-8696.257ENSPVAG00000010429RBMS18794.161Pteropus_vampyrus
ENSCJAG00000012871-9974.339ENSPNYG00000002643RBMS19773.643Pundamilia_nyererei
ENSCJAG00000012871-9371.875ENSPNAG00000010225rbms1a9769.948Pygocentrus_nattereri
ENSCJAG00000012871-9976.127ENSPNAG00000023479RBMS19775.064Pygocentrus_nattereri
ENSCJAG00000012871-9993.834ENSRNOG00000008482Rbms19990.025Rattus_norvegicus
ENSCJAG00000012871-9995.213ENSRBIG00000044262RBMS110094.545Rhinopithecus_bieti
ENSCJAG00000012871-9995.479ENSRROG00000043108RBMS110095.052Rhinopithecus_roxellana
ENSCJAG00000012871-9896.247ENSSBOG00000034705RBMS110096.247Saimiri_boliviensis_boliviensis
ENSCJAG00000012871-9991.689ENSSHAG00000012271RBMS110087.427Sarcophilus_harrisii
ENSCJAG00000012871-9376.705ENSSFOG00015014493rbms1a10075.603Scleropages_formosus
ENSCJAG00000012871-9879.625ENSSFOG00015022929rbms19975.810Scleropages_formosus
ENSCJAG00000012871-9973.670ENSSMAG00000012152RBMS19476.638Scophthalmus_maximus
ENSCJAG00000012871-9263.768ENSSMAG00000012722rbms1a9961.644Scophthalmus_maximus
ENSCJAG00000012871-9975.798ENSSDUG00000018803RBMS19775.258Seriola_dumerili
ENSCJAG00000012871-9264.058ENSSDUG00000020602rbms1a9961.918Seriola_dumerili
ENSCJAG00000012871-9264.058ENSSLDG00000009495rbms1a9661.111Seriola_lalandi_dorsalis
ENSCJAG00000012871-9975.532ENSSLDG00000016556RBMS19775.000Seriola_lalandi_dorsalis
ENSCJAG00000012871-9964.894ENSSARG00000011085RBMS19465.183Sorex_araneus
ENSCJAG00000012871-9390.057ENSSPUG00000017163RBMS110089.840Sphenodon_punctatus
ENSCJAG00000012871-9976.330ENSSPAG00000000059RBMS19775.773Stegastes_partitus
ENSCJAG00000012871-9263.768ENSSPAG00000005371rbms1a9660.847Stegastes_partitus
ENSCJAG00000012871-9894.792ENSSSCG00000015888RBMS19694.792Sus_scrofa
ENSCJAG00000012871-9990.617ENSTGUG00000006606RBMS19987.032Taeniopygia_guttata
ENSCJAG00000012871-9162.865ENSTRUG00000017155rbms1a9559.524Takifugu_rubripes
ENSCJAG00000012871-9372.521ENSTRUG00000005466-9771.026Takifugu_rubripes
ENSCJAG00000012871-9361.254ENSTNIG00000009477rbms1a9961.610Tetraodon_nigroviridis
ENSCJAG00000012871-9972.340ENSTNIG00000016496RBMS110072.149Tetraodon_nigroviridis
ENSCJAG00000012871-9984.574ENSTBEG00000016156RBMS110084.252Tupaia_belangeri
ENSCJAG00000012871-9994.149ENSTTRG00000011058RBMS110093.963Tursiops_truncatus
ENSCJAG00000012871-9994.906ENSUAMG00000022331RBMS19990.750Ursus_americanus
ENSCJAG00000012871-9994.906ENSUMAG00000008605RBMS19894.459Ursus_maritimus
ENSCJAG00000012871-9394.302ENSVPAG00000002716RBMS19990.451Vicugna_pacos
ENSCJAG00000012871-9991.517ENSVVUG00000018682RBMS110095.676Vulpes_vulpes
ENSCJAG00000012871-9980.106ENSXETG00000016204rbms19980.211Xenopus_tropicalis
ENSCJAG00000012871-9373.011ENSXCOG00000000211RBMS110073.190Xiphophorus_couchianus
ENSCJAG00000012871-9261.159ENSXCOG00000001659rbms1a9957.031Xiphophorus_couchianus
ENSCJAG00000012871-9973.138ENSXMAG00000011405RBMS110070.270Xiphophorus_maculatus
ENSCJAG00000012871-9263.768ENSXMAG00000001802rbms1a9660.847Xiphophorus_maculatus

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