EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000013206 (Gene tree)
Gene ID: 100407891
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 5087 bases
Position: chrNTIC01011113.1:283295-288381
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000024249	zf-met	PF12874.7	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000025646	-	1392	-	ENSCJAP00000024249	463 (aa)	-	F7G260

Gene Model

Click here to download ENSCJAG00000013206's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000013206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000013206	-	100	98.707	ENSG00000104897	SF3A2	100	100.000	Homo_sapiens
ENSCJAG00000013206	-	53	90.164	ENSAPOG00000003916	sf3a2	73	95.370	Acanthochromis_polyacanthus
ENSCJAG00000013206	-	100	92.026	ENSAMEG00000005469	SF3A2	52	99.582	Ailuropoda_melanoleuca
ENSCJAG00000013206	-	52	90.833	ENSACIG00000018153	sf3a2	73	95.370	Amphilophus_citrinellus
ENSCJAG00000013206	-	53	90.164	ENSAOCG00000015960	sf3a2	73	95.370	Amphiprion_ocellaris
ENSCJAG00000013206	-	53	90.164	ENSAPEG00000012336	sf3a2	73	95.370	Amphiprion_percula
ENSCJAG00000013206	-	53	90.984	ENSATEG00000015449	sf3a2	77	92.544	Anabas_testudineus
ENSCJAG00000013206	-	56	88.123	ENSACLG00000002356	sf3a2	77	93.778	Astatotilapia_calliptera
ENSCJAG00000013206	-	53	91.429	ENSAMXG00000032428	sf3a2	72	95.833	Astyanax_mexicanus
ENSCJAG00000013206	-	100	93.711	ENSBTAG00000025452	SF3A2	100	93.724	Bos_taurus
ENSCJAG00000013206	-	100	93.096	ENSCAFG00000019414	SF3A2	88	85.977	Canis_familiaris
ENSCJAG00000013206	-	100	93.096	ENSCAFG00020018153	SF3A2	50	99.582	Canis_lupus_dingo
ENSCJAG00000013206	-	100	93.711	ENSCHIG00000018323	SF3A2	100	93.724	Capra_hircus
ENSCJAG00000013206	-	100	93.966	ENSCPOG00000032868	SF3A2	100	93.966	Cavia_porcellus
ENSCJAG00000013206	-	100	97.240	ENSCCAG00000009812	SF3A2	100	97.240	Cebus_capucinus
ENSCJAG00000013206	-	100	98.707	ENSCATG00000038453	SF3A2	100	98.707	Cercocebus_atys
ENSCJAG00000013206	-	100	95.032	ENSCLAG00000008987	SF3A2	100	95.032	Chinchilla_lanigera
ENSCJAG00000013206	-	100	96.815	ENSCSAG00000011717	SF3A2	100	96.815	Chlorocebus_sabaeus
ENSCJAG00000013206	-	53	95.510	ENSCPBG00000018569	SF3A2	72	97.788	Chrysemys_picta_bellii
ENSCJAG00000013206	-	100	98.491	ENSCANG00000024451	SF3A2	100	98.491	Colobus_angolensis_palliatus
ENSCJAG00000013206	-	52	99.582	ENSCGRG00000011089	Sf3a2	94	99.451	Cricetulus_griseus_crigri
ENSCJAG00000013206	-	57	85.985	ENSCSEG00000014308	sf3a2	79	93.304	Cynoglossus_semilaevis
ENSCJAG00000013206	-	52	90.000	ENSCVAG00000021349	sf3a2	73	95.833	Cyprinodon_variegatus
ENSCJAG00000013206	-	53	90.204	ENSDARG00000021107	sf3a2	81	93.750	Danio_rerio
ENSCJAG00000013206	-	100	94.828	ENSDORG00000014445	Sf3a2	52	99.163	Dipodomys_ordii
ENSCJAG00000013206	-	63	68.136	FBgn0036314	Sf3a2	86	82.379	Drosophila_melanogaster
ENSCJAG00000013206	-	66	100.000	ENSETEG00000016949	-	59	100.000	Echinops_telfairi
ENSCJAG00000013206	-	52	99.582	ENSEASG00005021972	SF3A2	52	99.582	Equus_asinus_asinus
ENSCJAG00000013206	-	52	92.531	ENSELUG00000008471	sf3a2	74	94.222	Esox_lucius
ENSCJAG00000013206	-	86	90.976	ENSFCAG00000030476	SF3A2	55	99.163	Felis_catus
ENSCJAG00000013206	-	52	90.417	ENSFHEG00000002392	sf3a2	74	95.370	Fundulus_heteroclitus
ENSCJAG00000013206	-	52	90.041	ENSGMOG00000012186	sf3a2	72	95.370	Gadus_morhua
ENSCJAG00000013206	-	53	93.061	ENSGALG00000021679	SF3A2	72	97.345	Gallus_gallus
ENSCJAG00000013206	-	53	91.020	ENSGACG00000015255	sf3a2	74	96.296	Gasterosteus_aculeatus
ENSCJAG00000013206	-	100	98.707	ENSGGOG00000006613	SF3A2	100	98.707	Gorilla_gorilla
ENSCJAG00000013206	-	56	88.123	ENSHBUG00000021796	sf3a2	77	93.778	Haplochromis_burtoni
ENSCJAG00000013206	-	86	88.626	ENSHGLG00000015102	SF3A2	88	99.454	Heterocephalus_glaber_female
ENSCJAG00000013206	-	93	99.588	ENSHGLG00100000418	SF3A2	88	99.454	Heterocephalus_glaber_male
ENSCJAG00000013206	-	57	87.594	ENSHCOG00000001223	sf3a2	77	93.750	Hippocampus_comes
ENSCJAG00000013206	-	53	89.754	ENSIPUG00000019071	sf3a2	72	95.370	Ictalurus_punctatus
ENSCJAG00000013206	-	100	96.603	ENSSTOG00000007495	SF3A2	100	96.603	Ictidomys_tridecemlineatus
ENSCJAG00000013206	-	100	97.198	ENSJJAG00000010635	Sf3a2	100	97.198	Jaculus_jaculus
ENSCJAG00000013206	-	53	87.755	ENSKMAG00000006295	sf3a2	73	95.370	Kryptolebias_marmoratus
ENSCJAG00000013206	-	53	91.393	ENSLBEG00000000677	sf3a2	77	92.982	Labrus_bergylta
ENSCJAG00000013206	-	53	92.245	ENSLACG00000008744	SF3A2	72	95.575	Latimeria_chalumnae
ENSCJAG00000013206	-	50	92.672	ENSLOCG00000005835	sf3a2	70	96.296	Lepisosteus_oculatus
ENSCJAG00000013206	-	100	98.707	ENSMFAG00000002638	SF3A2	100	98.707	Macaca_fascicularis
ENSCJAG00000013206	-	100	98.707	ENSMMUG00000010111	SF3A2	100	98.707	Macaca_mulatta
ENSCJAG00000013206	-	100	97.240	ENSMNEG00000036916	SF3A2	100	97.240	Macaca_nemestrina
ENSCJAG00000013206	-	53	90.164	ENSMAMG00000009881	sf3a2	76	93.304	Mastacembelus_armatus
ENSCJAG00000013206	-	56	88.123	ENSMZEG00005025609	sf3a2	77	93.778	Maylandia_zebra
ENSCJAG00000013206	-	53	93.061	ENSMGAG00000001950	SF3A2	72	97.345	Meleagris_gallopavo
ENSCJAG00000013206	-	100	96.328	ENSMICG00000015443	SF3A2	100	96.328	Microcebus_murinus
ENSCJAG00000013206	-	52	99.582	ENSMOCG00000007216	Sf3a2	52	99.582	Microtus_ochrogaster
ENSCJAG00000013206	-	56	80.153	ENSMMOG00000010657	sf3a2	85	81.250	Mola_mola
ENSCJAG00000013206	-	53	90.574	ENSMALG00000020442	sf3a2	77	91.667	Monopterus_albus
ENSCJAG00000013206	-	52	99.582	MGP_CAROLIEiJ_G0015602	-	94	99.451	Mus_caroli
ENSCJAG00000013206	-	52	99.582	ENSMUSG00000020211	Sf3a2	94	99.451	Mus_musculus
ENSCJAG00000013206	-	52	99.582	MGP_PahariEiJ_G0031015	-	94	99.451	Mus_pahari
ENSCJAG00000013206	-	52	99.582	MGP_SPRETEiJ_G0016420	-	94	99.451	Mus_spretus
ENSCJAG00000013206	-	100	87.866	ENSMPUG00000006956	SF3A2	52	98.745	Mustela_putorius_furo
ENSCJAG00000013206	-	85	90.220	ENSMLUG00000004426	-	54	99.163	Myotis_lucifugus
ENSCJAG00000013206	-	52	91.667	ENSNBRG00000019872	sf3a2	77	93.778	Neolamprologus_brichardi
ENSCJAG00000013206	-	52	91.250	ENSONIG00000010198	sf3a2	77	93.333	Oreochromis_niloticus
ENSCJAG00000013206	-	57	85.338	ENSORLG00000015301	sf3a2	74	94.444	Oryzias_latipes
ENSCJAG00000013206	-	57	85.338	ENSORLG00020017235	sf3a2	74	94.444	Oryzias_latipes_hni
ENSCJAG00000013206	-	52	89.583	ENSORLG00015017116	sf3a2	74	94.444	Oryzias_latipes_hsok
ENSCJAG00000013206	-	52	90.000	ENSOMEG00000020860	sf3a2	74	94.907	Oryzias_melastigma
ENSCJAG00000013206	-	52	100.000	ENSOGAG00000033389	SF3A2	52	100.000	Otolemur_garnettii
ENSCJAG00000013206	-	100	94.041	ENSOARG00000014357	SF3A2	100	85.313	Ovis_aries
ENSCJAG00000013206	-	81	85.356	ENSPPAG00000037864	-	50	85.356	Pan_paniscus
ENSCJAG00000013206	-	100	86.186	ENSPPRG00000007798	SF3A2	51	99.163	Panthera_pardus
ENSCJAG00000013206	-	100	98.707	ENSPTRG00000010227	SF3A2	100	98.707	Pan_troglodytes
ENSCJAG00000013206	-	100	98.922	ENSPANG00000007949	SF3A2	100	98.922	Papio_anubis
ENSCJAG00000013206	-	53	92.623	ENSPKIG00000009487	sf3a2	71	94.222	Paramormyrops_kingsleyae
ENSCJAG00000013206	-	53	94.332	ENSPSIG00000010839	SF3A2	72	96.491	Pelodiscus_sinensis
ENSCJAG00000013206	-	52	99.582	ENSPEMG00000021288	Sf3a2	52	99.582	Peromyscus_maniculatus_bairdii
ENSCJAG00000013206	-	100	97.198	ENSPPYG00000009342	SF3A2	100	97.198	Pongo_abelii
ENSCJAG00000013206	-	92	84.163	ENSPCAG00000014513	SF3A2	85	80.460	Procavia_capensis
ENSCJAG00000013206	-	52	100.000	ENSPCOG00000020295	SF3A2	53	100.000	Propithecus_coquereli
ENSCJAG00000013206	-	56	88.123	ENSPNYG00000006928	sf3a2	77	93.778	Pundamilia_nyererei
ENSCJAG00000013206	-	53	90.574	ENSPNAG00000027582	sf3a2	72	95.833	Pygocentrus_nattereri
ENSCJAG00000013206	-	52	99.163	ENSRNOG00000019349	Sf3a2	51	99.163	Rattus_norvegicus
ENSCJAG00000013206	-	99	85.507	ENSRBIG00000026709	SF3A2	66	100.000	Rhinopithecus_bieti
ENSCJAG00000013206	-	100	96.391	ENSRROG00000034440	SF3A2	100	96.391	Rhinopithecus_roxellana
ENSCJAG00000013206	-	100	89.871	ENSSBOG00000026071	SF3A2	100	90.302	Saimiri_boliviensis_boliviensis
ENSCJAG00000013206	-	53	98.381	ENSSHAG00000011677	-	100	98.381	Sarcophilus_harrisii
ENSCJAG00000013206	-	56	89.189	ENSSFOG00015010920	sf3a2	64	92.920	Scleropages_formosus
ENSCJAG00000013206	-	52	91.667	ENSSMAG00000002629	sf3a2	75	95.833	Scophthalmus_maximus
ENSCJAG00000013206	-	54	89.641	ENSSDUG00000015810	sf3a2	78	92.544	Seriola_dumerili
ENSCJAG00000013206	-	54	89.641	ENSSLDG00000010874	sf3a2	78	92.544	Seriola_lalandi_dorsalis
ENSCJAG00000013206	-	53	90.574	ENSSPAG00000004960	sf3a2	77	92.105	Stegastes_partitus
ENSCJAG00000013206	-	52	98.745	ENSSSCG00000039757	SF3A2	52	98.745	Sus_scrofa
ENSCJAG00000013206	-	51	90.717	ENSTRUG00000009045	sf3a2	75	95.370	Takifugu_rubripes
ENSCJAG00000013206	-	52	89.669	ENSTNIG00000015318	sf3a2	75	94.907	Tetraodon_nigroviridis
ENSCJAG00000013206	-	52	84.100	ENSTTRG00000010177	-	100	83.019	Tursiops_truncatus
ENSCJAG00000013206	-	100	93.096	ENSVVUG00000002578	SF3A2	50	99.582	Vulpes_vulpes
ENSCJAG00000013206	-	53	93.443	ENSXETG00000024943	sf3a2	54	96.429	Xenopus_tropicalis