EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000013538 (Gene tree)
Gene ID: 100395223
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 10911 bases
Position: chrNTIC01035500.1:145856152-145867062
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000024967	RRM_1	PF00076.22	4.8e-58	1	4
ENSCJAP00000024967	RRM_1	PF00076.22	4.8e-58	2	4
ENSCJAP00000024967	RRM_1	PF00076.22	4.8e-58	3	4
ENSCJAP00000024967	RRM_1	PF00076.22	4.8e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000026394	NCL-201	3538	-	ENSCJAP00000024967	712 (aa)	-	U3EBK8

Gene Model

Click here to download ENSCJAG00000013538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000013538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000013538	NCL	92	91.020	ENSG00000115053	NCL	100	91.892	Homo_sapiens
ENSCJAG00000013538	NCL	62	97.039	ENSAMEG00000016289	NCL	53	96.570	Ailuropoda_melanoleuca
ENSCJAG00000013538	NCL	100	72.331	ENSANAG00000024378	-	85	78.832	Aotus_nancymaae
ENSCJAG00000013538	NCL	100	97.063	ENSANAG00000035814	-	100	97.063	Aotus_nancymaae
ENSCJAG00000013538	NCL	73	92.642	ENSBTAG00000026909	-	95	92.642	Bos_taurus
ENSCJAG00000013538	NCL	89	92.157	ENSBTAG00000051320	-	73	90.141	Bos_taurus
ENSCJAG00000013538	NCL	92	90.164	ENSBTAG00000050728	-	84	90.164	Bos_taurus
ENSCJAG00000013538	NCL	93	84.964	ENSBTAG00000016174	NCL	54	96.570	Bos_taurus
ENSCJAG00000013538	NCL	100	86.806	ENSCAFG00000011037	NCL	92	85.455	Canis_familiaris
ENSCJAG00000013538	NCL	83	87.375	ENSCAFG00020023145	NCL	87	86.655	Canis_lupus_dingo
ENSCJAG00000013538	NCL	84	85.784	ENSCHIG00000010894	-	57	96.306	Capra_hircus
ENSCJAG00000013538	NCL	92	79.059	ENSCHIG00000026149	-	53	89.182	Capra_hircus
ENSCJAG00000013538	NCL	92	63.553	ENSCHIG00000012143	-	60	81.003	Capra_hircus
ENSCJAG00000013538	NCL	79	96.460	ENSCHIG00000021052	-	100	96.503	Capra_hircus
ENSCJAG00000013538	NCL	92	86.061	ENSTSYG00000004355	-	53	97.625	Carlito_syrichta
ENSCJAG00000013538	NCL	90	73.791	ENSTSYG00000036886	-	61	85.185	Carlito_syrichta
ENSCJAG00000013538	NCL	95	83.333	ENSTSYG00000029779	-	50	96.980	Carlito_syrichta
ENSCJAG00000013538	NCL	62	90.433	ENSCAPG00000009405	NCL	52	88.918	Cavia_aperea
ENSCJAG00000013538	NCL	53	94.195	ENSCPOG00000001034	NCL	53	94.195	Cavia_porcellus
ENSCJAG00000013538	NCL	100	95.531	ENSCCAG00000021040	-	92	91.437	Cebus_capucinus
ENSCJAG00000013538	NCL	86	89.447	ENSCCAG00000000551	-	76	89.552	Cebus_capucinus
ENSCJAG00000013538	NCL	92	90.715	ENSCATG00000037033	NCL	92	88.737	Cercocebus_atys
ENSCJAG00000013538	NCL	100	84.945	ENSCLAG00000013080	NCL	62	90.337	Chinchilla_lanigera
ENSCJAG00000013538	NCL	62	99.318	ENSCSAG00000006660	NCL	95	99.318	Chlorocebus_sabaeus
ENSCJAG00000013538	NCL	61	76.027	ENSCHOG00000012860	NCL	78	80.159	Choloepus_hoffmanni
ENSCJAG00000013538	NCL	58	100.000	ENSCANG00000036756	NCL	100	94.330	Colobus_angolensis_palliatus
ENSCJAG00000013538	NCL	92	79.909	ENSCGRG00001024315	-	91	77.912	Cricetulus_griseus_chok1gshd
ENSCJAG00000013538	NCL	92	64.970	ENSCGRG00001022350	-	56	78.684	Cricetulus_griseus_chok1gshd
ENSCJAG00000013538	NCL	92	66.165	ENSCGRG00000000507	-	56	78.684	Cricetulus_griseus_crigri
ENSCJAG00000013538	NCL	85	83.415	ENSCGRG00000017894	-	88	78.502	Cricetulus_griseus_crigri
ENSCJAG00000013538	NCL	100	75.556	ENSDNOG00000046347	-	63	79.819	Dasypus_novemcinctus
ENSCJAG00000013538	NCL	100	84.072	ENSDNOG00000010783	-	92	83.535	Dasypus_novemcinctus
ENSCJAG00000013538	NCL	92	75.460	ENSDORG00000012513	-	54	84.169	Dipodomys_ordii
ENSCJAG00000013538	NCL	51	74.044	ENSDORG00000023596	-	52	73.046	Dipodomys_ordii
ENSCJAG00000013538	NCL	73	66.396	ENSETEG00000008139	-	64	66.396	Echinops_telfairi
ENSCJAG00000013538	NCL	53	90.451	ENSETEG00000014756	-	86	90.501	Echinops_telfairi
ENSCJAG00000013538	NCL	85	78.748	ENSETEG00000018937	-	85	79.869	Echinops_telfairi
ENSCJAG00000013538	NCL	62	61.486	ENSETEG00000008553	-	80	65.000	Echinops_telfairi
ENSCJAG00000013538	NCL	98	85.472	ENSEASG00005008488	NCL	86	98.571	Equus_asinus_asinus
ENSCJAG00000013538	NCL	100	86.069	ENSECAG00000021868	NCL	92	84.812	Equus_caballus
ENSCJAG00000013538	NCL	85	81.322	ENSEEUG00000005913	NCL	54	91.293	Erinaceus_europaeus
ENSCJAG00000013538	NCL	100	87.414	ENSFCAG00000027622	NCL	92	84.743	Felis_catus
ENSCJAG00000013538	NCL	99	85.014	ENSFDAG00000014291	NCL	92	82.722	Fukomys_damarensis
ENSCJAG00000013538	NCL	92	90.868	ENSGGOG00000004300	NCL	92	91.324	Gorilla_gorilla
ENSCJAG00000013538	NCL	92	85.084	ENSHGLG00000002031	-	92	82.470	Heterocephalus_glaber_female
ENSCJAG00000013538	NCL	50	84.091	ENSHGLG00000005133	-	82	84.071	Heterocephalus_glaber_female
ENSCJAG00000013538	NCL	91	75.767	ENSHGLG00000011069	-	55	86.772	Heterocephalus_glaber_female
ENSCJAG00000013538	NCL	92	84.932	ENSHGLG00100014537	-	92	81.860	Heterocephalus_glaber_male
ENSCJAG00000013538	NCL	53	85.600	ENSHGLG00100000745	-	82	85.676	Heterocephalus_glaber_male
ENSCJAG00000013538	NCL	53	82.586	ENSJJAG00000016165	Ncl	91	78.328	Jaculus_jaculus
ENSCJAG00000013538	NCL	100	95.543	ENSMFAG00000040385	NCL	100	87.435	Macaca_fascicularis
ENSCJAG00000013538	NCL	100	100.000	ENSMMUG00000018094	NCL	92	88.906	Macaca_mulatta
ENSCJAG00000013538	NCL	98	100.000	ENSMNEG00000023839	NCL	100	93.427	Macaca_nemestrina
ENSCJAG00000013538	NCL	100	95.119	ENSMLEG00000028935	NCL	92	88.584	Mandrillus_leucophaeus
ENSCJAG00000013538	NCL	100	88.440	ENSMICG00000002538	-	92	85.258	Microcebus_murinus
ENSCJAG00000013538	NCL	92	69.618	ENSMICG00000029975	-	86	79.608	Microcebus_murinus
ENSCJAG00000013538	NCL	92	77.341	MGP_CAROLIEiJ_G0014362	Ncl	53	86.807	Mus_caroli
ENSCJAG00000013538	NCL	92	77.190	ENSMUSG00000026234	Ncl	53	86.807	Mus_musculus
ENSCJAG00000013538	NCL	92	76.054	MGP_PahariEiJ_G0027599	Ncl	53	86.807	Mus_pahari
ENSCJAG00000013538	NCL	92	76.923	MGP_SPRETEiJ_G0015164	Ncl	53	86.807	Mus_spretus
ENSCJAG00000013538	NCL	92	84.766	ENSMLUG00000014547	NCL	53	97.098	Myotis_lucifugus
ENSCJAG00000013538	NCL	92	79.970	ENSNGAG00000002454	-	53	90.237	Nannospalax_galili
ENSCJAG00000013538	NCL	53	73.333	ENSNGAG00000006188	-	54	72.559	Nannospalax_galili
ENSCJAG00000013538	NCL	85	83.579	ENSNLEG00000014107	-	95	83.734	Nomascus_leucogenys
ENSCJAG00000013538	NCL	53	90.451	ENSODEG00000002748	-	59	90.476	Octodon_degus
ENSCJAG00000013538	NCL	99	64.087	ENSODEG00000007803	-	90	62.278	Octodon_degus
ENSCJAG00000013538	NCL	53	90.451	ENSODEG00000003281	-	53	90.476	Octodon_degus
ENSCJAG00000013538	NCL	92	71.166	ENSODEG00000002441	-	84	85.593	Octodon_degus
ENSCJAG00000013538	NCL	70	87.699	ENSOARG00000013710	-	64	94.195	Ovis_aries
ENSCJAG00000013538	NCL	88	86.458	ENSOARG00000013270	-	53	90.110	Ovis_aries
ENSCJAG00000013538	NCL	91	80.060	ENSOARG00000020709	-	56	95.288	Ovis_aries
ENSCJAG00000013538	NCL	54	79.016	ENSOARG00000004072	-	61	79.420	Ovis_aries
ENSCJAG00000013538	NCL	92	91.324	ENSPPAG00000011619	NCL	92	91.781	Pan_paniscus
ENSCJAG00000013538	NCL	100	87.083	ENSPPRG00000012603	NCL	92	84.697	Panthera_pardus
ENSCJAG00000013538	NCL	91	85.627	ENSPTIG00000010393	NCL	53	96.834	Panthera_tigris_altaica
ENSCJAG00000013538	NCL	92	90.122	ENSPTRG00000013025	NCL	92	90.729	Pan_troglodytes
ENSCJAG00000013538	NCL	100	95.543	ENSPANG00000010292	NCL	92	88.906	Papio_anubis
ENSCJAG00000013538	NCL	100	85.437	ENSPPYG00000013265	NCL	92	84.615	Pongo_abelii
ENSCJAG00000013538	NCL	92	88.754	ENSPCOG00000003051	-	91	87.367	Propithecus_coquereli
ENSCJAG00000013538	NCL	91	82.435	ENSPCOG00000004160	-	94	82.669	Propithecus_coquereli
ENSCJAG00000013538	NCL	100	88.072	ENSPVAG00000000297	NCL	53	97.361	Pteropus_vampyrus
ENSCJAG00000013538	NCL	92	77.410	ENSRNOG00000018273	Ncl	92	77.979	Rattus_norvegicus
ENSCJAG00000013538	NCL	92	87.023	ENSRBIG00000037525	-	63	93.905	Rhinopithecus_bieti
ENSCJAG00000013538	NCL	73	99.077	ENSRBIG00000035396	-	96	99.077	Rhinopithecus_bieti
ENSCJAG00000013538	NCL	99	86.177	ENSRROG00000036103	-	99	86.473	Rhinopithecus_roxellana
ENSCJAG00000013538	NCL	84	99.644	ENSRROG00000028756	-	91	89.634	Rhinopithecus_roxellana
ENSCJAG00000013538	NCL	100	96.100	ENSSBOG00000029193	-	92	92.857	Saimiri_boliviensis_boliviensis
ENSCJAG00000013538	NCL	100	83.708	ENSSBOG00000027549	-	94	91.344	Saimiri_boliviensis_boliviensis
ENSCJAG00000013538	NCL	56	75.342	ENSSBOG00000023094	-	76	75.566	Saimiri_boliviensis_boliviensis
ENSCJAG00000013538	NCL	53	96.042	ENSSSCG00000016275	NCL	52	96.042	Sus_scrofa
ENSCJAG00000013538	NCL	66	82.436	ENSTBEG00000002469	-	66	82.286	Tupaia_belangeri
ENSCJAG00000013538	NCL	87	81.488	ENSTBEG00000001546	-	85	80.331	Tupaia_belangeri
ENSCJAG00000013538	NCL	92	83.891	ENSTTRG00000009094	NCL	53	95.503	Tursiops_truncatus
ENSCJAG00000013538	NCL	71	96.316	ENSUAMG00000005639	NCL	87	97.039	Ursus_americanus
ENSCJAG00000013538	NCL	100	86.750	ENSUMAG00000015789	NCL	92	85.258	Ursus_maritimus
ENSCJAG00000013538	NCL	70	84.058	ENSVPAG00000001796	NCL	69	84.058	Vicugna_pacos
ENSCJAG00000013538	NCL	100	84.958	ENSVVUG00000025564	NCL	64	97.039	Vulpes_vulpes