EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000013792 (Gene tree)
Gene ID: 100394487
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 11139 bases
Position: chrNTIC01038832.1:14461300-14472438
Accession: 100394487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000025370	zf-C2H2	PF00096.26	2.5e-21	1	4
ENSCJAP00000025370	zf-C2H2	PF00096.26	2.5e-21	2	4
ENSCJAP00000025370	zf-C2H2	PF00096.26	2.5e-21	3	4
ENSCJAP00000025370	zf-C2H2	PF00096.26	2.5e-21	4	4
ENSCJAP00000025364	zf-C2H2	PF00096.26	1.6e-20	1	4
ENSCJAP00000025364	zf-C2H2	PF00096.26	1.6e-20	2	4
ENSCJAP00000025364	zf-C2H2	PF00096.26	1.6e-20	3	4
ENSCJAP00000025364	zf-C2H2	PF00096.26	1.6e-20	4	4
ENSCJAP00000025364	zf-met	PF12874.7	0.0006	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000026804	ZIC3-201	1374	-	ENSCJAP00000025364	457 (aa)	-	F6ZZE3
ENSCJAT00000026810	ZIC3-202	4202	XM_017968767	ENSCJAP00000025370	467 (aa)	XP_017824256	F6ZH47

Gene Model

Click here to download ENSCJAG00000013792's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000013792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000013792	ZIC3	100	98.501	ENSG00000156925	ZIC3	100	98.501	Homo_sapiens
ENSCJAG00000013792	ZIC3	100	99.572	ENSANAG00000019614	ZIC3	100	99.572	Aotus_nancymaae
ENSCJAG00000013792	ZIC3	100	98.073	ENSCAFG00000018979	ZIC3	100	98.073	Canis_familiaris
ENSCJAG00000013792	ZIC3	100	95.289	ENSTSYG00000003356	ZIC3	100	95.289	Carlito_syrichta
ENSCJAG00000013792	ZIC3	53	98.780	ENSCPOG00000002374	ZIC3	100	98.780	Cavia_porcellus
ENSCJAG00000013792	ZIC3	100	99.358	ENSCCAG00000025983	ZIC3	100	99.358	Cebus_capucinus
ENSCJAG00000013792	ZIC3	100	98.501	ENSCATG00000036569	ZIC3	100	98.501	Cercocebus_atys
ENSCJAG00000013792	ZIC3	100	98.287	ENSCLAG00000001934	ZIC3	100	98.287	Chinchilla_lanigera
ENSCJAG00000013792	ZIC3	93	86.468	ENSCPBG00000026115	ZIC3	100	86.468	Chrysemys_picta_bellii
ENSCJAG00000013792	ZIC3	100	98.287	ENSCANG00000017505	ZIC3	100	98.287	Colobus_angolensis_palliatus
ENSCJAG00000013792	ZIC3	100	98.073	ENSCGRG00001024527	Zic3	100	98.073	Cricetulus_griseus_chok1gshd
ENSCJAG00000013792	ZIC3	100	97.216	ENSDORG00000025481	Zic3	100	97.216	Dipodomys_ordii
ENSCJAG00000013792	ZIC3	100	98.073	ENSFCAG00000025684	ZIC3	100	98.073	Felis_catus
ENSCJAG00000013792	ZIC3	79	98.383	ENSFDAG00000014929	ZIC3	100	99.593	Fukomys_damarensis
ENSCJAG00000013792	ZIC3	94	80.909	ENSGAGG00000004149	ZIC3	92	80.909	Gopherus_agassizii
ENSCJAG00000013792	ZIC3	100	98.501	ENSGGOG00000011914	ZIC3	100	98.501	Gorilla_gorilla
ENSCJAG00000013792	ZIC3	100	97.216	ENSHGLG00000006298	ZIC3	100	97.216	Heterocephalus_glaber_female
ENSCJAG00000013792	ZIC3	67	69.408	ENSHGLG00100002829	ZIC3	100	77.070	Heterocephalus_glaber_male
ENSCJAG00000013792	ZIC3	100	98.073	ENSJJAG00000022714	Zic3	100	98.073	Jaculus_jaculus
ENSCJAG00000013792	ZIC3	100	76.496	ENSLACG00000014597	ZIC3	100	76.496	Latimeria_chalumnae
ENSCJAG00000013792	ZIC3	88	94.647	ENSLAFG00000007048	ZIC3	99	94.647	Loxodonta_africana
ENSCJAG00000013792	ZIC3	100	98.501	ENSMFAG00000027018	ZIC3	100	98.501	Macaca_fascicularis
ENSCJAG00000013792	ZIC3	100	98.249	ENSMMUG00000002023	ZIC3	100	98.249	Macaca_mulatta
ENSCJAG00000013792	ZIC3	100	98.501	ENSMNEG00000040682	ZIC3	100	98.501	Macaca_nemestrina
ENSCJAG00000013792	ZIC3	100	98.501	ENSMLEG00000004378	ZIC3	100	98.501	Mandrillus_leucophaeus
ENSCJAG00000013792	ZIC3	100	97.859	ENSMAUG00000009402	Zic3	100	97.859	Mesocricetus_auratus
ENSCJAG00000013792	ZIC3	100	98.287	ENSMICG00000042529	ZIC3	100	98.287	Microcebus_murinus
ENSCJAG00000013792	ZIC3	100	97.645	ENSMOCG00000020544	Zic3	100	97.645	Microtus_ochrogaster
ENSCJAG00000013792	ZIC3	100	97.645	MGP_CAROLIEiJ_G0033101	Zic3	100	99.593	Mus_caroli
ENSCJAG00000013792	ZIC3	100	97.645	ENSMUSG00000067860	Zic3	100	99.593	Mus_musculus
ENSCJAG00000013792	ZIC3	100	97.645	MGP_PahariEiJ_G0031644	Zic3	100	99.593	Mus_pahari
ENSCJAG00000013792	ZIC3	100	97.645	MGP_SPRETEiJ_G0034256	Zic3	100	99.593	Mus_spretus
ENSCJAG00000013792	ZIC3	100	97.430	ENSNGAG00000023346	Zic3	100	97.430	Nannospalax_galili
ENSCJAG00000013792	ZIC3	78	98.577	ENSNLEG00000003005	-	100	98.577	Nomascus_leucogenys
ENSCJAG00000013792	ZIC3	100	98.073	ENSODEG00000005556	ZIC3	100	98.073	Octodon_degus
ENSCJAG00000013792	ZIC3	100	98.501	ENSPPAG00000030013	ZIC3	100	98.501	Pan_paniscus
ENSCJAG00000013792	ZIC3	100	98.073	ENSPPRG00000010839	ZIC3	100	98.073	Panthera_pardus
ENSCJAG00000013792	ZIC3	100	98.501	ENSPTRG00000043849	ZIC3	100	98.501	Pan_troglodytes
ENSCJAG00000013792	ZIC3	100	98.501	ENSPANG00000011357	ZIC3	100	98.501	Papio_anubis
ENSCJAG00000013792	ZIC3	100	73.774	ENSPKIG00000017705	zic3	100	73.774	Paramormyrops_kingsleyae
ENSCJAG00000013792	ZIC3	62	90.068	ENSPSIG00000011896	ZIC3	99	90.068	Pelodiscus_sinensis
ENSCJAG00000013792	ZIC3	100	97.859	ENSPEMG00000022168	Zic3	100	97.859	Peromyscus_maniculatus_bairdii
ENSCJAG00000013792	ZIC3	100	97.859	ENSPCOG00000021557	ZIC3	100	97.859	Propithecus_coquereli
ENSCJAG00000013792	ZIC3	100	97.216	ENSRNOG00000000861	Zic3	100	97.216	Rattus_norvegicus
ENSCJAG00000013792	ZIC3	100	98.287	ENSRBIG00000030660	ZIC3	100	98.287	Rhinopithecus_bieti
ENSCJAG00000013792	ZIC3	100	98.287	ENSRROG00000028410	ZIC3	100	98.287	Rhinopithecus_roxellana
ENSCJAG00000013792	ZIC3	100	99.358	ENSSBOG00000024684	ZIC3	100	99.358	Saimiri_boliviensis_boliviensis
ENSCJAG00000013792	ZIC3	99	74.518	ENSSFOG00015011731	zic3	100	74.518	Scleropages_formosus
ENSCJAG00000013792	ZIC3	99	68.951	ENSSFOG00015008079	zic3	100	68.951	Scleropages_formosus
ENSCJAG00000013792	ZIC3	84	83.797	ENSTGUG00000002155	ZIC3	100	83.797	Taeniopygia_guttata
ENSCJAG00000013792	ZIC3	100	98.073	ENSVVUG00000021378	ZIC3	100	98.073	Vulpes_vulpes
ENSCJAG00000013792	ZIC3	100	76.809	ENSXETG00000024458	zic3	100	76.809	Xenopus_tropicalis