EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000013830 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 1274 bases
Position: chrNTIC01001113.1:80150164-80151437
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000008949	RRM_1	PF00076.22	5e-30	1	2
ENSCJAP00000008949	RRM_1	PF00076.22	5e-30	2	2
ENSCJAP00000025429	RRM_1	PF00076.22	1.2e-24	1	2
ENSCJAP00000025429	RRM_1	PF00076.22	1.2e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000009455	-	1065	-	ENSCJAP00000008949	354 (aa)	-	F7I5N4
ENSCJAT00000026876	-	1053	-	ENSCJAP00000025429	350 (aa)	-	F6W1B6

Gene Model

Click here to download ENSCJAG00000013830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000013830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000013830	-	67	40.708	ENSCJAG00000013998	MSI2	72	42.391
ENSCJAG00000013830	-	56	35.897	ENSCJAG00000015197	-	50	35.385
ENSCJAG00000013830	-	64	93.534	ENSCJAG00000023383	-	86	93.534
ENSCJAG00000013830	-	55	30.052	ENSCJAG00000002381	TARDBP	61	31.034
ENSCJAG00000013830	-	69	37.759	ENSCJAG00000008578	MSI1	53	40.722
ENSCJAG00000013830	-	52	75.661	ENSCJAG00000045231	-	53	77.665
ENSCJAG00000013830	-	99	96.056	ENSCJAG00000006928	HNRNPA3	94	96.056
ENSCJAG00000013830	-	64	73.750	ENSCJAG00000018864	-	73	82.741
ENSCJAG00000013830	-	65	38.298	ENSCJAG00000015165	HNRNPD	58	41.791
ENSCJAG00000013830	-	61	49.091	ENSCJAG00000006112	HNRNPA0	61	55.376
ENSCJAG00000013830	-	53	92.268	ENSCJAG00000047621	-	56	92.268
ENSCJAG00000013830	-	90	54.769	ENSCJAG00000007908	HNRNPA2B1	72	72.193
ENSCJAG00000013830	-	69	31.405	ENSCJAG00000012235	HNRNPAB	68	37.129
ENSCJAG00000013830	-	52	79.365	ENSCJAG00000047153	-	61	81.218
ENSCJAG00000013830	-	95	63.324	ENSCJAG00000045179	-	56	75.510
ENSCJAG00000013830	-	61	83.784	ENSCJAG00000041746	-	79	83.575
ENSCJAG00000013830	-	55	32.381	ENSCJAG00000005609	DAZAP1	52	34.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000013830	-	54	49.074	ENSG00000177733	HNRNPA0	61	56.452	Homo_sapiens
ENSCJAG00000013830	-	53	77.487	ENSAPOG00000003641	hnrnpa3	74	77.957	Acanthochromis_polyacanthus
ENSCJAG00000013830	-	51	53.107	ENSAPOG00000003364	HNRNPA0	63	52.604	Acanthochromis_polyacanthus
ENSCJAG00000013830	-	53	76.166	ENSAPOG00000014678	-	56	77.368	Acanthochromis_polyacanthus
ENSCJAG00000013830	-	55	77.114	ENSAPOG00000003688	hnrnpa3	54	77.778	Acanthochromis_polyacanthus
ENSCJAG00000013830	-	62	55.814	ENSAPOG00000003387	HNRNPA0	66	59.788	Acanthochromis_polyacanthus
ENSCJAG00000013830	-	51	59.444	ENSACIG00000021834	HNRNPA0	93	60.335	Amphilophus_citrinellus
ENSCJAG00000013830	-	55	77.114	ENSAOCG00000004095	hnrnpa3	54	77.778	Amphiprion_ocellaris
ENSCJAG00000013830	-	55	77.114	ENSAPEG00000022522	hnrnpa3	54	77.778	Amphiprion_percula
ENSCJAG00000013830	-	51	54.494	ENSATEG00000003526	-	94	54.802	Anabas_testudineus
ENSCJAG00000013830	-	55	77.114	ENSATEG00000015304	hnrnpa3	60	77.114	Anabas_testudineus
ENSCJAG00000013830	-	55	90.050	ENSACAG00000012234	-	53	90.050	Anolis_carolinensis
ENSCJAG00000013830	-	53	53.927	ENSANAG00000017086	HNRNPA0	60	55.376	Aotus_nancymaae
ENSCJAG00000013830	-	90	94.688	ENSANAG00000037918	-	99	87.179	Aotus_nancymaae
ENSCJAG00000013830	-	54	78.571	ENSACLG00000008532	hnrnpa3	59	78.571	Astatotilapia_calliptera
ENSCJAG00000013830	-	53	79.581	ENSAMXG00000007065	hnrnpa3	57	79.104	Astyanax_mexicanus
ENSCJAG00000013830	-	88	45.283	ENSBTAG00000016929	HNRNPA0	59	56.452	Bos_taurus
ENSCJAG00000013830	-	54	50.000	ENSCHIG00000002602	HNRNPA0	61	56.452	Capra_hircus
ENSCJAG00000013830	-	90	84.568	ENSCAPG00000003643	-	95	85.070	Cavia_aperea
ENSCJAG00000013830	-	66	47.899	ENSCCAG00000010302	HNRNPA0	60	55.376	Cebus_capucinus
ENSCJAG00000013830	-	54	49.074	ENSCATG00000021167	HNRNPA0	60	56.452	Cercocebus_atys
ENSCJAG00000013830	-	99	74.571	ENSCATG00000038569	-	99	78.571	Cercocebus_atys
ENSCJAG00000013830	-	93	67.073	ENSCLAG00000007120	-	63	67.094	Chinchilla_lanigera
ENSCJAG00000013830	-	67	66.390	ENSCSAG00000011517	-	57	66.364	Chlorocebus_sabaeus
ENSCJAG00000013830	-	61	50.000	ENSCSAG00000000499	HNRNPA0	61	56.452	Chlorocebus_sabaeus
ENSCJAG00000013830	-	71	53.435	ENSCING00000013663	-	53	62.189	Ciona_intestinalis
ENSCJAG00000013830	-	55	96.939	ENSCANG00000017881	-	54	96.939	Colobus_angolensis_palliatus
ENSCJAG00000013830	-	61	50.000	ENSCANG00000038062	HNRNPA0	60	56.452	Colobus_angolensis_palliatus
ENSCJAG00000013830	-	57	79.227	ENSCGRG00001010070	-	65	78.607	Cricetulus_griseus_chok1gshd
ENSCJAG00000013830	-	57	79.227	ENSCGRG00000007592	-	64	78.607	Cricetulus_griseus_crigri
ENSCJAG00000013830	-	63	74.009	ENSDARG00000059351	hnrnpa3	83	79.000	Danio_rerio
ENSCJAG00000013830	-	54	50.000	ENSDNOG00000030903	HNRNPA0	59	56.452	Dasypus_novemcinctus
ENSCJAG00000013830	-	56	89.604	ENSDNOG00000031964	-	63	90.050	Dasypus_novemcinctus
ENSCJAG00000013830	-	51	77.838	ENSETEG00000007747	-	69	77.778	Echinops_telfairi
ENSCJAG00000013830	-	67	58.506	ENSEBUG00000016570	HNRNPA0	56	68.783	Eptatretus_burgeri
ENSCJAG00000013830	-	91	56.707	ENSELUG00000023080	hnrnpa3	65	73.980	Esox_lucius
ENSCJAG00000013830	-	66	49.160	ENSFCAG00000040261	HNRNPA0	61	56.452	Felis_catus
ENSCJAG00000013830	-	68	48.571	ENSFALG00000014395	HNRNPA0	55	57.527	Ficedula_albicollis
ENSCJAG00000013830	-	91	75.076	ENSFDAG00000000331	-	52	77.114	Fukomys_damarensis
ENSCJAG00000013830	-	55	75.521	ENSFDAG00000018739	-	73	75.521	Fukomys_damarensis
ENSCJAG00000013830	-	55	75.622	ENSFDAG00000014067	-	62	75.962	Fukomys_damarensis
ENSCJAG00000013830	-	69	96.000	ENSFDAG00000009547	-	53	63.000	Fukomys_damarensis
ENSCJAG00000013830	-	53	56.111	ENSGMOG00000016232	HNRNPA0	68	56.021	Gadus_morhua
ENSCJAG00000013830	-	67	70.539	ENSGACG00000004477	hnrnpa3	66	76.263	Gasterosteus_aculeatus
ENSCJAG00000013830	-	56	46.502	ENSGAGG00000005632	HNRNPA0	65	56.500	Gopherus_agassizii
ENSCJAG00000013830	-	51	59.444	ENSHBUG00000023868	HNRNPA0	74	58.947	Haplochromis_burtoni
ENSCJAG00000013830	-	54	78.571	ENSHBUG00000019734	hnrnpa3	59	78.571	Haplochromis_burtoni
ENSCJAG00000013830	-	55	89.062	ENSHGLG00000014577	-	74	88.889	Heterocephalus_glaber_female
ENSCJAG00000013830	-	61	49.545	ENSHGLG00000018216	HNRNPA0	62	55.914	Heterocephalus_glaber_female
ENSCJAG00000013830	-	55	90.547	ENSHGLG00100006677	-	56	90.547	Heterocephalus_glaber_male
ENSCJAG00000013830	-	51	58.084	ENSHCOG00000007174	HNRNPA0	95	58.683	Hippocampus_comes
ENSCJAG00000013830	-	53	79.581	ENSIPUG00000019815	RO32	60	78.607	Ictalurus_punctatus
ENSCJAG00000013830	-	65	80.786	ENSSTOG00000019374	-	58	80.751	Ictidomys_tridecemlineatus
ENSCJAG00000013830	-	50	56.593	ENSJJAG00000006954	Hnrnpa0	62	56.284	Jaculus_jaculus
ENSCJAG00000013830	-	55	76.119	ENSKMAG00000015973	hnrnpa3	59	76.768	Kryptolebias_marmoratus
ENSCJAG00000013830	-	55	78.109	ENSLBEG00000016767	hnrnpa3	60	78.109	Labrus_bergylta
ENSCJAG00000013830	-	61	79.091	ENSLACG00000008189	hnrnpa3	56	82.915	Latimeria_chalumnae
ENSCJAG00000013830	-	52	83.158	ENSLOCG00000006986	hnrnpa3	58	82.673	Lepisosteus_oculatus
ENSCJAG00000013830	-	51	80.435	ENSLOCG00000006476	-	54	78.788	Lepisosteus_oculatus
ENSCJAG00000013830	-	52	85.635	ENSLAFG00000027712	-	59	86.264	Loxodonta_africana
ENSCJAG00000013830	-	61	50.000	ENSMFAG00000030522	HNRNPA0	60	56.452	Macaca_fascicularis
ENSCJAG00000013830	-	99	74.432	ENSMMUG00000031232	-	99	78.409	Macaca_mulatta
ENSCJAG00000013830	-	61	50.000	ENSMNEG00000015863	HNRNPA0	60	56.452	Macaca_nemestrina
ENSCJAG00000013830	-	99	72.321	ENSMNEG00000038943	-	80	76.617	Macaca_nemestrina
ENSCJAG00000013830	-	61	50.000	ENSMLEG00000026629	HNRNPA0	60	56.452	Mandrillus_leucophaeus
ENSCJAG00000013830	-	51	60.556	ENSMAMG00000017754	HNRNPA0	82	61.453	Mastacembelus_armatus
ENSCJAG00000013830	-	54	78.571	ENSMZEG00005004663	hnrnpa3	59	78.571	Maylandia_zebra
ENSCJAG00000013830	-	90	78.395	ENSMODG00000024570	-	98	78.028	Monodelphis_domestica
ENSCJAG00000013830	-	94	60.651	ENSMALG00000009691	hnrnpa3	83	74.747	Monopterus_albus
ENSCJAG00000013830	-	61	45.211	MGP_CAROLIEiJ_G0018593	Hnrnpa0	67	53.431	Mus_caroli
ENSCJAG00000013830	-	61	48.182	MGP_SPRETEiJ_G0019473	Hnrnpa0	67	53.431	Mus_spretus
ENSCJAG00000013830	-	66	49.580	ENSMLUG00000012683	-	63	56.250	Myotis_lucifugus
ENSCJAG00000013830	-	55	89.796	ENSNLEG00000027151	-	57	89.796	Nomascus_leucogenys
ENSCJAG00000013830	-	54	49.309	ENSODEG00000019566	HNRNPA0	61	55.914	Octodon_degus
ENSCJAG00000013830	-	50	49.451	ENSORLG00000027074	-	81	50.000	Oryzias_latipes
ENSCJAG00000013830	-	50	50.273	ENSORLG00000025015	-	59	51.099	Oryzias_latipes
ENSCJAG00000013830	-	50	50.273	ENSORLG00000025332	-	59	51.099	Oryzias_latipes
ENSCJAG00000013830	-	56	76.961	ENSORLG00000017561	hnrnpa3	59	77.612	Oryzias_latipes
ENSCJAG00000013830	-	91	42.154	ENSORLG00020007505	-	58	50.000	Oryzias_latipes_hni
ENSCJAG00000013830	-	56	77.451	ENSORLG00020020788	hnrnpa3	59	78.109	Oryzias_latipes_hni
ENSCJAG00000013830	-	91	40.615	ENSORLG00020008203	-	58	50.000	Oryzias_latipes_hni
ENSCJAG00000013830	-	92	42.216	ENSORLG00020007109	-	58	48.901	Oryzias_latipes_hni
ENSCJAG00000013830	-	81	40.909	ENSORLG00020022487	-	61	52.299	Oryzias_latipes_hni
ENSCJAG00000013830	-	50	44.134	ENSORLG00015016236	HNRNPA0	61	42.857	Oryzias_latipes_hsok
ENSCJAG00000013830	-	50	50.282	ENSORLG00015015185	-	60	50.847	Oryzias_latipes_hsok
ENSCJAG00000013830	-	54	47.980	ENSORLG00015015182	-	79	50.549	Oryzias_latipes_hsok
ENSCJAG00000013830	-	67	39.373	ENSORLG00015016302	HNRNPA0	63	50.761	Oryzias_latipes_hsok
ENSCJAG00000013830	-	72	40.288	ENSORLG00015016157	-	62	49.714	Oryzias_latipes_hsok
ENSCJAG00000013830	-	76	42.545	ENSORLG00015016169	HNRNPA0	59	49.425	Oryzias_latipes_hsok
ENSCJAG00000013830	-	55	77.612	ENSORLG00015014774	hnrnpa3	59	77.612	Oryzias_latipes_hsok
ENSCJAG00000013830	-	92	41.994	ENSORLG00015017144	-	58	51.149	Oryzias_latipes_hsok
ENSCJAG00000013830	-	91	42.857	ENSORLG00015016507	-	55	50.847	Oryzias_latipes_hsok
ENSCJAG00000013830	-	55	78.109	ENSOMEG00000004838	hnrnpa3	60	78.109	Oryzias_melastigma
ENSCJAG00000013830	-	50	56.831	ENSOGAG00000025754	HNRNPA0	78	56.452	Otolemur_garnettii
ENSCJAG00000013830	-	61	50.000	ENSPANG00000012900	HNRNPA0	60	56.452	Papio_anubis
ENSCJAG00000013830	-	55	80.597	ENSPKIG00000022916	hnrnpa3	72	80.597	Paramormyrops_kingsleyae
ENSCJAG00000013830	-	54	71.574	ENSPMGG00000000747	hnrnpa3	95	63.054	Periophthalmus_magnuspinnatus
ENSCJAG00000013830	-	69	47.809	ENSPEMG00000020274	Hnrnpa0	80	56.593	Peromyscus_maniculatus_bairdii
ENSCJAG00000013830	-	69	60.236	ENSPMAG00000004449	-	85	68.687	Petromyzon_marinus
ENSCJAG00000013830	-	55	75.622	ENSPFOG00000014049	hnrnpa3	60	76.263	Poecilia_formosa
ENSCJAG00000013830	-	51	52.907	ENSPLAG00000015223	-	61	52.941	Poecilia_latipinna
ENSCJAG00000013830	-	55	75.622	ENSPMEG00000006390	hnrnpa3	60	76.263	Poecilia_mexicana
ENSCJAG00000013830	-	74	66.418	ENSPREG00000005411	hnrnpa3	68	71.707	Poecilia_reticulata
ENSCJAG00000013830	-	51	93.827	ENSPPYG00000012967	-	78	83.854	Pongo_abelii
ENSCJAG00000013830	-	54	49.074	ENSPPYG00000015814	HNRNPA0	61	56.452	Pongo_abelii
ENSCJAG00000013830	-	72	61.154	ENSPNYG00000008424	hnrnpa3	75	79.888	Pundamilia_nyererei
ENSCJAG00000013830	-	61	50.000	ENSRBIG00000023673	HNRNPA0	61	56.452	Rhinopithecus_bieti
ENSCJAG00000013830	-	90	72.152	ENSRROG00000034643	-	55	77.720	Rhinopithecus_roxellana
ENSCJAG00000013830	-	61	50.000	ENSRROG00000002558	HNRNPA0	61	56.452	Rhinopithecus_roxellana
ENSCJAG00000013830	-	53	78.756	ENSSFOG00015016280	hnrnpa1	56	79.474	Scleropages_formosus
ENSCJAG00000013830	-	56	80.198	ENSSFOG00015001814	hnrnpa3	56	80.597	Scleropages_formosus
ENSCJAG00000013830	-	50	64.205	ENSSFOG00015002650	HNRNPA0	58	63.978	Scleropages_formosus
ENSCJAG00000013830	-	56	74.146	ENSSMAG00000015218	hnrnpa3	52	75.253	Scophthalmus_maximus
ENSCJAG00000013830	-	92	56.928	ENSSDUG00000000381	hnrnpa3	61	77.249	Seriola_dumerili
ENSCJAG00000013830	-	55	76.617	ENSSPAG00000008969	hnrnpa3	59	77.273	Stegastes_partitus
ENSCJAG00000013830	-	56	59.314	ENSSSCG00000040926	-	55	61.140	Sus_scrofa
ENSCJAG00000013830	-	90	71.037	ENSSSCG00000001098	-	90	76.220	Sus_scrofa
ENSCJAG00000013830	-	54	61.224	ENSSSCG00000033635	-	55	61.538	Sus_scrofa
ENSCJAG00000013830	-	67	47.280	ENSTGUG00000001186	HNRNPA0	58	56.111	Taeniopygia_guttata
ENSCJAG00000013830	-	55	75.622	ENSTRUG00000017504	hnrnpa3	58	77.041	Takifugu_rubripes
ENSCJAG00000013830	-	54	77.041	ENSTNIG00000016958	hnrnpa3	58	75.500	Tetraodon_nigroviridis
ENSCJAG00000013830	-	50	57.377	ENSXETG00000003833	hnrnpa0	63	56.122	Xenopus_tropicalis
ENSCJAG00000013830	-	55	87.065	ENSXETG00000001806	hnrnpa3	54	87.065	Xenopus_tropicalis
ENSCJAG00000013830	-	55	76.119	ENSXMAG00000000439	hnrnpa3	60	76.119	Xiphophorus_maculatus
ENSCJAG00000013830	-	51	51.648	ENSXMAG00000029150	HNRNPA0	65	51.777	Xiphophorus_maculatus