EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000014689 (Gene tree)
Gene ID: 100398509
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrNTIC01000001.1:204638786-204641521
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000048625	RNA_ligase	PF09414.10	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000059702	LIG4-201	2736	-	ENSCJAP00000048625	911 (aa)	-	F6TM13

Gene Model

Click here to download ENSCJAG00000014689's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000014689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000014689	LIG4	100	95.280	ENSG00000174405	LIG4	100	95.280	Homo_sapiens
ENSCJAG00000014689	LIG4	99	65.642	ENSAPOG00000000866	lig4	99	65.862	Acanthochromis_polyacanthus
ENSCJAG00000014689	LIG4	100	87.377	ENSAMEG00000019685	LIG4	99	87.377	Ailuropoda_melanoleuca
ENSCJAG00000014689	LIG4	99	65.787	ENSACIG00000018309	lig4	99	66.007	Amphilophus_citrinellus
ENSCJAG00000014689	LIG4	99	65.714	ENSAOCG00000011768	lig4	99	65.862	Amphiprion_ocellaris
ENSCJAG00000014689	LIG4	99	65.752	ENSAPEG00000017815	lig4	99	65.971	Amphiprion_percula
ENSCJAG00000014689	LIG4	99	65.055	ENSATEG00000005583	lig4	99	65.165	Anabas_testudineus
ENSCJAG00000014689	LIG4	97	74.659	ENSAPLG00000001673	LIG4	99	74.659	Anas_platyrhynchos
ENSCJAG00000014689	LIG4	99	75.305	ENSACAG00000014566	LIG4	99	75.305	Anolis_carolinensis
ENSCJAG00000014689	LIG4	100	98.024	ENSANAG00000012446	LIG4	100	98.024	Aotus_nancymaae
ENSCJAG00000014689	LIG4	99	65.127	ENSACLG00000027051	lig4	99	65.127	Astatotilapia_calliptera
ENSCJAG00000014689	LIG4	99	63.786	ENSAMXG00000008192	lig4	94	63.786	Astyanax_mexicanus
ENSCJAG00000014689	LIG4	100	87.157	ENSBTAG00000015868	LIG4	100	87.157	Bos_taurus
ENSCJAG00000014689	LIG4	100	88.804	ENSCAFG00000006031	LIG4	100	88.804	Canis_familiaris
ENSCJAG00000014689	LIG4	100	88.804	ENSCAFG00020021230	LIG4	100	88.804	Canis_lupus_dingo
ENSCJAG00000014689	LIG4	100	87.157	ENSCHIG00000001019	LIG4	100	87.157	Capra_hircus
ENSCJAG00000014689	LIG4	99	87.043	ENSCAPG00000006284	LIG4	99	87.043	Cavia_aperea
ENSCJAG00000014689	LIG4	100	87.047	ENSCPOG00000014266	LIG4	100	87.047	Cavia_porcellus
ENSCJAG00000014689	LIG4	100	96.707	ENSCCAG00000019971	LIG4	100	96.707	Cebus_capucinus
ENSCJAG00000014689	LIG4	100	94.841	ENSCATG00000021075	LIG4	100	94.841	Cercocebus_atys
ENSCJAG00000014689	LIG4	100	88.364	ENSCLAG00000003376	LIG4	100	88.364	Chinchilla_lanigera
ENSCJAG00000014689	LIG4	100	95.280	ENSCSAG00000000211	LIG4	100	95.280	Chlorocebus_sabaeus
ENSCJAG00000014689	LIG4	99	78.808	ENSCPBG00000023291	LIG4	100	78.214	Chrysemys_picta_bellii
ENSCJAG00000014689	LIG4	68	45.151	ENSCING00000009536	-	95	45.151	Ciona_intestinalis
ENSCJAG00000014689	LIG4	83	45.335	ENSCSAVG00000010336	-	98	45.335	Ciona_savignyi
ENSCJAG00000014689	LIG4	100	95.060	ENSCANG00000005805	LIG4	100	95.060	Colobus_angolensis_palliatus
ENSCJAG00000014689	LIG4	100	85.746	ENSCGRG00001012072	Lig4	100	85.746	Cricetulus_griseus_chok1gshd
ENSCJAG00000014689	LIG4	100	85.746	ENSCGRG00000013417	Lig4	100	85.746	Cricetulus_griseus_crigri
ENSCJAG00000014689	LIG4	97	65.455	ENSCSEG00000013905	lig4	95	65.455	Cynoglossus_semilaevis
ENSCJAG00000014689	LIG4	99	66.113	ENSCVAG00000007896	lig4	99	66.113	Cyprinodon_variegatus
ENSCJAG00000014689	LIG4	99	63.636	ENSDARG00000060620	lig4	98	63.636	Danio_rerio
ENSCJAG00000014689	LIG4	100	88.377	ENSDNOG00000000513	LIG4	100	88.377	Dasypus_novemcinctus
ENSCJAG00000014689	LIG4	100	86.937	ENSDORG00000027303	Lig4	100	86.937	Dipodomys_ordii
ENSCJAG00000014689	LIG4	89	31.301	FBgn0030506	Lig4	90	31.301	Drosophila_melanogaster
ENSCJAG00000014689	LIG4	99	83.149	ENSETEG00000015563	LIG4	100	83.481	Echinops_telfairi
ENSCJAG00000014689	LIG4	99	42.902	ENSEBUG00000014243	lig4	99	42.902	Eptatretus_burgeri
ENSCJAG00000014689	LIG4	100	89.682	ENSEASG00005022073	LIG4	100	89.682	Equus_asinus_asinus
ENSCJAG00000014689	LIG4	100	89.243	ENSECAG00000003257	LIG4	100	89.243	Equus_caballus
ENSCJAG00000014689	LIG4	99	66.152	ENSELUG00000006787	lig4	99	66.262	Esox_lucius
ENSCJAG00000014689	LIG4	100	87.925	ENSFCAG00000031985	LIG4	100	87.925	Felis_catus
ENSCJAG00000014689	LIG4	89	75.154	ENSFALG00000004214	LIG4	98	75.154	Ficedula_albicollis
ENSCJAG00000014689	LIG4	100	87.816	ENSFDAG00000008973	LIG4	100	87.816	Fukomys_damarensis
ENSCJAG00000014689	LIG4	99	64.784	ENSFHEG00000007398	lig4	89	64.784	Fundulus_heteroclitus
ENSCJAG00000014689	LIG4	85	64.129	ENSGMOG00000012843	lig4	99	64.129	Gadus_morhua
ENSCJAG00000014689	LIG4	100	74.127	ENSGALG00000016854	LIG4	100	74.127	Gallus_gallus
ENSCJAG00000014689	LIG4	99	65.145	ENSGAFG00000019779	lig4	95	64.796	Gambusia_affinis
ENSCJAG00000014689	LIG4	99	63.234	ENSGACG00000014135	lig4	99	63.245	Gasterosteus_aculeatus
ENSCJAG00000014689	LIG4	100	95.170	ENSGGOG00000027771	LIG4	100	95.170	Gorilla_gorilla
ENSCJAG00000014689	LIG4	99	64.906	ENSHBUG00000006245	lig4	99	64.906	Haplochromis_burtoni
ENSCJAG00000014689	LIG4	100	88.364	ENSHGLG00000000718	LIG4	100	88.364	Heterocephalus_glaber_female
ENSCJAG00000014689	LIG4	100	88.364	ENSHGLG00100003265	LIG4	100	88.364	Heterocephalus_glaber_male
ENSCJAG00000014689	LIG4	99	64.396	ENSHCOG00000012010	lig4	99	64.396	Hippocampus_comes
ENSCJAG00000014689	LIG4	99	64.764	ENSIPUG00000013748	lig4	99	64.764	Ictalurus_punctatus
ENSCJAG00000014689	LIG4	100	88.913	ENSSTOG00000024303	LIG4	100	88.913	Ictidomys_tridecemlineatus
ENSCJAG00000014689	LIG4	100	86.169	ENSJJAG00000006750	Lig4	100	86.169	Jaculus_jaculus
ENSCJAG00000014689	LIG4	99	65.116	ENSKMAG00000001149	lig4	99	65.116	Kryptolebias_marmoratus
ENSCJAG00000014689	LIG4	91	65.264	ENSLBEG00000014578	lig4	100	65.505	Labrus_bergylta
ENSCJAG00000014689	LIG4	99	71.792	ENSLACG00000003282	LIG4	99	71.792	Latimeria_chalumnae
ENSCJAG00000014689	LIG4	99	69.846	ENSLOCG00000008901	lig4	98	69.846	Lepisosteus_oculatus
ENSCJAG00000014689	LIG4	100	86.090	ENSLAFG00000031152	LIG4	100	86.090	Loxodonta_africana
ENSCJAG00000014689	LIG4	100	95.280	ENSMFAG00000037235	LIG4	100	95.280	Macaca_fascicularis
ENSCJAG00000014689	LIG4	100	95.060	ENSMMUG00000008874	LIG4	100	95.060	Macaca_mulatta
ENSCJAG00000014689	LIG4	100	95.280	ENSMNEG00000023575	LIG4	100	95.280	Macaca_nemestrina
ENSCJAG00000014689	LIG4	100	95.170	ENSMLEG00000026720	LIG4	100	95.170	Mandrillus_leucophaeus
ENSCJAG00000014689	LIG4	99	65.275	ENSMAMG00000008472	lig4	99	65.495	Mastacembelus_armatus
ENSCJAG00000014689	LIG4	99	65.127	ENSMZEG00005001855	lig4	99	65.127	Maylandia_zebra
ENSCJAG00000014689	LIG4	100	75.000	ENSMGAG00000015532	LIG4	100	75.000	Meleagris_gallopavo
ENSCJAG00000014689	LIG4	100	82.986	ENSMOCG00000019000	Lig4	100	82.986	Microtus_ochrogaster
ENSCJAG00000014689	LIG4	99	65.006	ENSMMOG00000004390	lig4	99	65.006	Mola_mola
ENSCJAG00000014689	LIG4	100	82.547	ENSMODG00000025064	LIG4	100	82.547	Monodelphis_domestica
ENSCJAG00000014689	LIG4	99	65.116	ENSMALG00000008555	lig4	99	65.116	Monopterus_albus
ENSCJAG00000014689	LIG4	100	86.059	MGP_CAROLIEiJ_G0030809	Lig4	100	86.059	Mus_caroli
ENSCJAG00000014689	LIG4	100	86.059	ENSMUSG00000049717	Lig4	100	86.059	Mus_musculus
ENSCJAG00000014689	LIG4	100	86.059	MGP_PahariEiJ_G0021270	Lig4	100	86.059	Mus_pahari
ENSCJAG00000014689	LIG4	100	86.059	MGP_SPRETEiJ_G0031917	Lig4	100	86.059	Mus_spretus
ENSCJAG00000014689	LIG4	100	87.047	ENSMPUG00000018675	LIG4	100	87.047	Mustela_putorius_furo
ENSCJAG00000014689	LIG4	100	89.682	ENSMLUG00000001267	LIG4	100	89.682	Myotis_lucifugus
ENSCJAG00000014689	LIG4	100	85.730	ENSNGAG00000013258	Lig4	100	85.730	Nannospalax_galili
ENSCJAG00000014689	LIG4	99	65.347	ENSNBRG00000021252	lig4	99	65.347	Neolamprologus_brichardi
ENSCJAG00000014689	LIG4	100	94.512	ENSNLEG00000007888	LIG4	100	94.512	Nomascus_leucogenys
ENSCJAG00000014689	LIG4	100	86.059	ENSOPRG00000005765	LIG4	100	86.059	Ochotona_princeps
ENSCJAG00000014689	LIG4	100	86.937	ENSODEG00000019683	LIG4	100	86.937	Octodon_degus
ENSCJAG00000014689	LIG4	99	64.945	ENSONIG00000011969	lig4	98	65.165	Oreochromis_niloticus
ENSCJAG00000014689	LIG4	100	89.243	ENSOCUG00000015734	LIG4	100	89.243	Oryctolagus_cuniculus
ENSCJAG00000014689	LIG4	99	63.626	ENSORLG00000004041	lig4	99	63.846	Oryzias_latipes
ENSCJAG00000014689	LIG4	99	63.956	ENSORLG00020019607	lig4	99	64.176	Oryzias_latipes_hni
ENSCJAG00000014689	LIG4	99	63.736	ENSORLG00015017754	lig4	99	63.956	Oryzias_latipes_hsok
ENSCJAG00000014689	LIG4	74	69.231	ENSOMEG00000003459	lig4	98	69.231	Oryzias_melastigma
ENSCJAG00000014689	LIG4	100	90.680	ENSOGAG00000032120	LIG4	99	90.680	Otolemur_garnettii
ENSCJAG00000014689	LIG4	82	88.591	ENSOARG00000005590	LIG4	98	88.591	Ovis_aries
ENSCJAG00000014689	LIG4	100	94.621	ENSPPAG00000032998	LIG4	100	94.621	Pan_paniscus
ENSCJAG00000014689	LIG4	100	88.474	ENSPPRG00000017804	LIG4	100	88.474	Panthera_pardus
ENSCJAG00000014689	LIG4	100	88.364	ENSPTIG00000010051	LIG4	100	88.364	Panthera_tigris_altaica
ENSCJAG00000014689	LIG4	100	94.731	ENSPTRG00000006025	LIG4	100	94.731	Pan_troglodytes
ENSCJAG00000014689	LIG4	100	94.951	ENSPANG00000007562	LIG4	100	94.951	Papio_anubis
ENSCJAG00000014689	LIG4	99	65.971	ENSPKIG00000011645	lig4	98	65.971	Paramormyrops_kingsleyae
ENSCJAG00000014689	LIG4	99	78.132	ENSPSIG00000001504	LIG4	99	78.132	Pelodiscus_sinensis
ENSCJAG00000014689	LIG4	99	62.667	ENSPMGG00000013486	lig4	99	62.239	Periophthalmus_magnuspinnatus
ENSCJAG00000014689	LIG4	100	85.855	ENSPEMG00000000076	Lig4	100	85.855	Peromyscus_maniculatus_bairdii
ENSCJAG00000014689	LIG4	100	81.998	ENSPCIG00000021882	LIG4	100	81.998	Phascolarctos_cinereus
ENSCJAG00000014689	LIG4	99	65.295	ENSPFOG00000000797	lig4	99	64.835	Poecilia_formosa
ENSCJAG00000014689	LIG4	99	65.184	ENSPLAG00000001196	lig4	99	64.725	Poecilia_latipinna
ENSCJAG00000014689	LIG4	99	65.295	ENSPMEG00000021353	lig4	99	64.945	Poecilia_mexicana
ENSCJAG00000014689	LIG4	99	65.072	ENSPREG00000007323	lig4	99	64.874	Poecilia_reticulata
ENSCJAG00000014689	LIG4	100	95.499	ENSPPYG00000005540	LIG4	100	95.499	Pongo_abelii
ENSCJAG00000014689	LIG4	100	89.133	ENSPVAG00000016403	LIG4	100	89.133	Pteropus_vampyrus
ENSCJAG00000014689	LIG4	99	65.017	ENSPNYG00000009660	lig4	99	65.017	Pundamilia_nyererei
ENSCJAG00000014689	LIG4	100	64.074	ENSPNAG00000028069	LIG4	100	64.074	Pygocentrus_nattereri
ENSCJAG00000014689	LIG4	100	64.074	ENSPNAG00000028056	lig4	100	64.074	Pygocentrus_nattereri
ENSCJAG00000014689	LIG4	100	84.193	ENSRNOG00000014605	Lig4	100	84.193	Rattus_norvegicus
ENSCJAG00000014689	LIG4	100	93.633	ENSRBIG00000039962	LIG4	100	93.633	Rhinopithecus_bieti
ENSCJAG00000014689	LIG4	100	94.621	ENSRROG00000006040	LIG4	100	94.621	Rhinopithecus_roxellana
ENSCJAG00000014689	LIG4	100	96.597	ENSSBOG00000019029	LIG4	100	96.597	Saimiri_boliviensis_boliviensis
ENSCJAG00000014689	LIG4	100	79.693	ENSSHAG00000009525	LIG4	100	79.693	Sarcophilus_harrisii
ENSCJAG00000014689	LIG4	100	64.738	ENSSFOG00015012835	lig4	100	64.738	Scleropages_formosus
ENSCJAG00000014689	LIG4	99	62.791	ENSSMAG00000011267	lig4	99	62.791	Scophthalmus_maximus
ENSCJAG00000014689	LIG4	99	66.075	ENSSDUG00000010343	lig4	98	66.075	Seriola_dumerili
ENSCJAG00000014689	LIG4	99	64.176	ENSSLDG00000003239	lig4	99	64.176	Seriola_lalandi_dorsalis
ENSCJAG00000014689	LIG4	100	81.510	ENSSARG00000006573	LIG4	100	81.510	Sorex_araneus
ENSCJAG00000014689	LIG4	93	76.777	ENSSPUG00000002444	LIG4	100	76.777	Sphenodon_punctatus
ENSCJAG00000014689	LIG4	99	65.495	ENSSPAG00000001609	lig4	99	65.495	Stegastes_partitus
ENSCJAG00000014689	LIG4	100	86.828	ENSSSCG00000009540	LIG4	100	86.828	Sus_scrofa
ENSCJAG00000014689	LIG4	99	74.336	ENSTGUG00000010795	LIG4	99	74.336	Taeniopygia_guttata
ENSCJAG00000014689	LIG4	99	65.165	ENSTRUG00000009984	lig4	99	65.165	Takifugu_rubripes
ENSCJAG00000014689	LIG4	99	65.385	ENSTNIG00000010348	lig4	99	65.604	Tetraodon_nigroviridis
ENSCJAG00000014689	LIG4	100	89.791	ENSTBEG00000017741	LIG4	100	89.791	Tupaia_belangeri
ENSCJAG00000014689	LIG4	100	87.816	ENSTTRG00000012660	LIG4	100	87.816	Tursiops_truncatus
ENSCJAG00000014689	LIG4	100	87.486	ENSUAMG00000003773	LIG4	100	87.486	Ursus_americanus
ENSCJAG00000014689	LIG4	99	70.925	ENSXETG00000002654	lig4	99	70.925	Xenopus_tropicalis
ENSCJAG00000014689	LIG4	99	65.184	ENSXCOG00000017401	lig4	99	64.725	Xiphophorus_couchianus
ENSCJAG00000014689	LIG4	99	65.222	ENSXMAG00000015142	lig4	99	64.764	Xiphophorus_maculatus